RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
PDE4D-203ENST00000340635 CCDC47Q96A33 483 aaKnown RBP17.11■□□□□ 0.33
PDE4D-203ENST00000340635 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
PDE4D-203ENST00000340635 AMOTL1Q8IY63 956 aa17.1■□□□□ 0.33
PDE4D-203ENST00000340635 CHMP4CQ96CF2 233 aa17.1■□□□□ 0.33
PDE4D-203ENST00000340635 CCDC43Q96MW1 224 aaKnown RBP17.1■□□□□ 0.33
PDE4D-203ENST00000340635 DDX11L8A8MPP1 907 aa17.08■□□□□ 0.32
PDE4D-203ENST00000340635 SYNE3Q6ZMZ3 975 aa17.08■□□□□ 0.32
PDE4D-203ENST00000340635 NAP1L1P55209 391 aaKnown RBP17.07■□□□□ 0.32
PDE4D-203ENST00000340635 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
PDE4D-203ENST00000340635 SLC4A10Q6U841 1118 aa17.07■□□□□ 0.32
PDE4D-203ENST00000340635 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
PDE4D-203ENST00000340635 ATP6V1DQ9Y5K8 247 aa17.07■□□□□ 0.32
PDE4D-203ENST00000340635 HOMER1Q86YM7 354 aa17.07■□□□□ 0.32
PDE4D-203ENST00000340635 MCTP1Q6DN14 999 aa17.06■□□□□ 0.32
PDE4D-203ENST00000340635 HOOK1Q9UJC3 728 aaKnown RBP17.06■□□□□ 0.32
PDE4D-203ENST00000340635 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
PDE4D-203ENST00000340635 ACBD3Q9H3P7 528 aa17.05■□□□□ 0.32
PDE4D-203ENST00000340635 TRIM29Q14134 588 aa17.05■□□□□ 0.32
PDE4D-203ENST00000340635 MLECQ14165 292 aa17.05■□□□□ 0.32
PDE4D-203ENST00000340635 HSP90AB2PQ58FF8 381 aa17.04■□□□□ 0.32
PDE4D-203ENST00000340635 RDXP35241 583 aaKnown RBP17.04■□□□□ 0.32
PDE4D-203ENST00000340635 U2AF1L5P0DN76 240 aaPredicted RBP17.03■□□□□ 0.32
PDE4D-203ENST00000340635 U2AF1Q01081 240 aaKnown RBP eCLIP17.03■□□□□ 0.32
PDE4D-203ENST00000340635 APPP05067 770 aa17.03■□□□□ 0.32
PDE4D-203ENST00000340635 DCAF11Q8TEB1 546 aa17.03■□□□□ 0.32
PDE4D-203ENST00000340635 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
PDE4D-203ENST00000340635 CLIP1P30622 1438 aa17.03■□□□□ 0.32
PDE4D-203ENST00000340635 ZFYVE27Q5T4F4 411 aa17.03■□□□□ 0.32
PDE4D-203ENST00000340635 SMC4Q9NTJ3 1288 aa17.03■□□□□ 0.32
PDE4D-203ENST00000340635 STK26Q9P289 416 aa17.03■□□□□ 0.32
PDE4D-203ENST00000340635 KTN1Q86UP2 1357 aaKnown RBP17.02■□□□□ 0.32
PDE4D-203ENST00000340635 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
PDE4D-203ENST00000340635 R3HCC1Q9Y3T6 440 aaKnown RBP17.02■□□□□ 0.32
PDE4D-203ENST00000340635 PAF1Q8N7H5 531 aa17.02■□□□□ 0.31
PDE4D-203ENST00000340635 ZRSR2Q15696 482 aaKnown RBP17.01■□□□□ 0.31
PDE4D-203ENST00000340635 CCDC173Q0VFZ6 552 aa17■□□□□ 0.31
PDE4D-203ENST00000340635 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
PDE4D-203ENST00000340635 H0YHG0 523 aa17■□□□□ 0.31
PDE4D-203ENST00000340635 DHX16O60231 1041 aaKnown RBP17■□□□□ 0.31
PDE4D-203ENST00000340635 PLCD4Q9BRC7 762 aa17■□□□□ 0.31
PDE4D-203ENST00000340635 FOXD4L6Q3SYB3 417 aaPredicted RBP17■□□□□ 0.31
PDE4D-203ENST00000340635 HSP90B2PQ58FF3 399 aa17■□□□□ 0.31
PDE4D-203ENST00000340635 FOXD4L3Q6VB84 417 aaPredicted RBP17■□□□□ 0.31
PDE4D-203ENST00000340635 RCAN3Q9UKA8 241 aa16.99■□□□□ 0.31
PDE4D-203ENST00000340635 EPS15P42566 896 aa16.99■□□□□ 0.31
PDE4D-203ENST00000340635 MYO6Q9UM54 1294 aa16.98■□□□□ 0.31
PDE4D-203ENST00000340635 LRRFIP1Q32MZ4 808 aaKnown RBP16.98■□□□□ 0.31
PDE4D-203ENST00000340635 CPLX2Q6PUV4 134 aaKnown RBP16.98■□□□□ 0.31
PDE4D-203ENST00000340635 ARGLU1Q9NWB6 273 aaPredicted RBP16.98■□□□□ 0.31
PDE4D-203ENST00000340635 RILPL2Q969X0 211 aa16.97■□□□□ 0.31
PDE4D-203ENST00000340635 DDX49Q9Y6V7 483 aaKnown RBP16.97■□□□□ 0.31
PDE4D-203ENST00000340635 CCER2I3L3R5 266 aa16.96■□□□□ 0.31
PDE4D-203ENST00000340635 MSH5O43196 834 aa16.96■□□□□ 0.31
PDE4D-203ENST00000340635 SKOR2Q2VWA4 1001 aaPredicted RBP16.96■□□□□ 0.31
PDE4D-203ENST00000340635 CWC15Q9P013 229 aaKnown RBP16.94■□□□□ 0.3
PDE4D-203ENST00000340635 CAGE1Q8TC20 777 aa16.93■□□□□ 0.3
PDE4D-203ENST00000340635 MNS1Q8NEH6 495 aa16.93■□□□□ 0.3
PDE4D-203ENST00000340635 FBXW7Q969H0 707 aa16.92■□□□□ 0.3
PDE4D-203ENST00000340635 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.92■□□□□ 0.3
PDE4D-203ENST00000340635 NEXNQ0ZGT2 675 aa16.92■□□□□ 0.3
PDE4D-203ENST00000340635 VPS37DQ86XT2 251 aa16.91■□□□□ 0.3
PDE4D-203ENST00000340635 FAM13BQ9NYF5 915 aa16.91■□□□□ 0.3
PDE4D-203ENST00000340635 WWC2Q6AWC2 1192 aa16.91■□□□□ 0.3
PDE4D-203ENST00000340635 CPLX1O14810 134 aa16.91■□□□□ 0.3
PDE4D-203ENST00000340635 OFD1O75665 1012 aa16.9■□□□□ 0.3
PDE4D-203ENST00000340635 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
PDE4D-203ENST00000340635 SKIDA1Q1XH10 827 aa16.89■□□□□ 0.29
PDE4D-203ENST00000340635 ERICH2A1L162 156 aa16.89■□□□□ 0.29
PDE4D-203ENST00000340635 NEFHP12036 1026 aa16.89■□□□□ 0.29
PDE4D-203ENST00000340635 BICD2Q8TD16 824 aa16.88■□□□□ 0.29
PDE4D-203ENST00000340635 SAMD1Q6SPF0 538 aaPredicted RBP16.88■□□□□ 0.29
PDE4D-203ENST00000340635 DIAPH3Q9NSV4 1193 aa16.88■□□□□ 0.29
PDE4D-203ENST00000340635 HSP90AB3PQ58FF7 597 aa16.88■□□□□ 0.29
PDE4D-203ENST00000340635 NFXL1Q6ZNB6 911 aa16.88■□□□□ 0.29
PDE4D-203ENST00000340635 GSE1Q14687 1217 aa16.87■□□□□ 0.29
PDE4D-203ENST00000340635 ERCC4Q92889 916 aaPredicted RBP16.87■□□□□ 0.29
PDE4D-203ENST00000340635 TMEM132AQ24JP5 1023 aa16.87■□□□□ 0.29
PDE4D-203ENST00000340635 TRDNQ13061 729 aa16.86■□□□□ 0.29
PDE4D-203ENST00000340635 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.86■□□□□ 0.29
PDE4D-203ENST00000340635 AMPHP49418 695 aa16.86■□□□□ 0.29
PDE4D-203ENST00000340635 SASS6Q6UVJ0 657 aa16.86■□□□□ 0.29
PDE4D-203ENST00000340635 STK11IPQ8N1F8 1099 aa16.86■□□□□ 0.29
PDE4D-203ENST00000340635 IFT57Q9NWB7 429 aa16.86■□□□□ 0.29
PDE4D-203ENST00000340635 CLUAP1Q96AJ1 413 aa16.85■□□□□ 0.29
PDE4D-203ENST00000340635 ANKRD62A6NC57 917 aa16.85■□□□□ 0.29
PDE4D-203ENST00000340635 ANKRD18AQ8IVF6 992 aa16.85■□□□□ 0.29
PDE4D-203ENST00000340635 SIN3AQ96ST3 1273 aa16.85■□□□□ 0.29
PDE4D-203ENST00000340635 SEPT7Q16181 437 aaKnown RBP16.85■□□□□ 0.29
PDE4D-203ENST00000340635 RUFY2Q8WXA3 655 aa16.84■□□□□ 0.29
PDE4D-203ENST00000340635 EIF3AQ14152 1382 aaKnown RBP16.84■□□□□ 0.29
PDE4D-203ENST00000340635 TSPYL1Q9H0U9 437 aa16.84■□□□□ 0.29
PDE4D-203ENST00000340635 CENPJQ9HC77 1338 aaPredicted RBP16.84■□□□□ 0.29
PDE4D-203ENST00000340635 ANO2Q9NQ90 1003 aa16.84■□□□□ 0.29
PDE4D-203ENST00000340635 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.29
PDE4D-203ENST00000340635 LTV1Q96GA3 475 aaPredicted RBP16.83■□□□□ 0.29
PDE4D-203ENST00000340635 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.29
PDE4D-203ENST00000340635 ROCK2O75116 1388 aaKnown RBP16.83■□□□□ 0.28
PDE4D-203ENST00000340635 SAFBQ15424 915 aaKnown RBP eCLIP16.82■□□□□ 0.28
PDE4D-203ENST00000340635 OLFM4Q6UX06 510 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms