RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ESCO1Q5FWF5 840 aa16.68■□□□□ 0.26
LIN54-201ENST00000340417 KTN1Q86UP2 1357 aaKnown RBP16.67■□□□□ 0.26
LIN54-201ENST00000340417 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
LIN54-201ENST00000340417 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
LIN54-201ENST00000340417 ADGRL1O94910 1474 aa16.67■□□□□ 0.26
LIN54-201ENST00000340417 EHBP1L1Q8N3D4 1523 aa16.66■□□□□ 0.26
LIN54-201ENST00000340417 C9orf84Q5VXU9 1444 aa16.66■□□□□ 0.26
LIN54-201ENST00000340417 AKNAQ7Z591 1439 aa16.66■□□□□ 0.26
LIN54-201ENST00000340417 KIF21AQ7Z4S6 1674 aa16.66■□□□□ 0.26
LIN54-201ENST00000340417 TEX14Q8IWB6 1497 aa16.65■□□□□ 0.26
LIN54-201ENST00000340417 SLC52A1Q9NWF4 448 aa16.65■□□□□ 0.26
LIN54-201ENST00000340417 CDK13Q14004 1512 aaKnown RBP16.65■□□□□ 0.26
LIN54-201ENST00000340417 HSP90AA1P07900 732 aaKnown RBP16.64■□□□□ 0.25
LIN54-201ENST00000340417 DENND4BO75064 1496 aaPredicted RBP16.64■□□□□ 0.25
LIN54-201ENST00000340417 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
LIN54-201ENST00000340417 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
LIN54-201ENST00000340417 SYTL4Q96C24 671 aaPredicted RBP16.63■□□□□ 0.25
LIN54-201ENST00000340417 SLC26A8Q96RN1 970 aa16.63■□□□□ 0.25
LIN54-201ENST00000340417 PHLDB1Q86UU1 1377 aa16.63■□□□□ 0.25
LIN54-201ENST00000340417 GPRASP1Q5JY77 1395 aa16.63■□□□□ 0.25
LIN54-201ENST00000340417 SF3B2Q13435 895 aaKnown RBP16.63■□□□□ 0.25
LIN54-201ENST00000340417 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
LIN54-201ENST00000340417 CEBPAP49715 358 aaPredicted RBP16.62■□□□□ 0.25
LIN54-201ENST00000340417 C1orf141Q5JVX7 400 aa16.62■□□□□ 0.25
LIN54-201ENST00000340417 EPRSP07814 1512 aaKnown RBP16.61■□□□□ 0.25
LIN54-201ENST00000340417 CALD1Q05682 793 aaKnown RBP16.61■□□□□ 0.25
LIN54-201ENST00000340417 TMEM132EQ6IEE7 984 aa16.61■□□□□ 0.25
LIN54-201ENST00000340417 FRAT1Q92837 279 aaPredicted RBP16.61■□□□□ 0.25
LIN54-201ENST00000340417 GTF2E1P29083 439 aaPredicted RBP16.6■□□□□ 0.25
LIN54-201ENST00000340417 ASXL2Q76L83 1435 aa16.6■□□□□ 0.25
LIN54-201ENST00000340417 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
LIN54-201ENST00000340417 STAC3Q96MF2 364 aa16.59■□□□□ 0.25
LIN54-201ENST00000340417 CHMP4AQ9BY43 222 aa16.59■□□□□ 0.25
LIN54-201ENST00000340417 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
LIN54-201ENST00000340417 KLHL34Q8N239 644 aa16.58■□□□□ 0.24
LIN54-201ENST00000340417 G3V3G9 751 aa16.57■□□□□ 0.24
LIN54-201ENST00000340417 FKBP8Q14318 412 aa16.57■□□□□ 0.24
LIN54-201ENST00000340417 DCAF8Q5TAQ9 597 aa16.57■□□□□ 0.24
LIN54-201ENST00000340417 CENPJQ9HC77 1338 aaPredicted RBP16.57■□□□□ 0.24
LIN54-201ENST00000340417 KIF14Q15058 1648 aa16.57■□□□□ 0.24
LIN54-201ENST00000340417 ST20-MTHFSA0A0A6YYL1 179 aa16.57■□□□□ 0.24
LIN54-201ENST00000340417 WDR62O43379 1518 aa16.57■□□□□ 0.24
LIN54-201ENST00000340417 CHMP4BQ9H444 224 aaKnown RBP16.56■□□□□ 0.24
LIN54-201ENST00000340417 FANCAO15360 1455 aa16.56■□□□□ 0.24
LIN54-201ENST00000340417 CGNL1Q0VF96 1302 aa16.56■□□□□ 0.24
LIN54-201ENST00000340417 RTL5Q5HYW3 569 aaPredicted RBP16.55■□□□□ 0.24
LIN54-201ENST00000340417 MIA2Q96PC5 1412 aa16.55■□□□□ 0.24
LIN54-201ENST00000340417 RRBP1Q9P2E9 1410 aaKnown RBP16.55■□□□□ 0.24
LIN54-201ENST00000340417 MIER1Q8N108 512 aa16.54■□□□□ 0.24
LIN54-201ENST00000340417 USP35Q9P2H5 1018 aa16.54■□□□□ 0.24
LIN54-201ENST00000340417 MS4A1P11836 297 aa16.53■□□□□ 0.24
LIN54-201ENST00000340417 NLRP2Q9NX02 1062 aa16.53■□□□□ 0.24
LIN54-201ENST00000340417 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
LIN54-201ENST00000340417 NLRP6P59044 892 aa16.53■□□□□ 0.24
LIN54-201ENST00000340417 EIF4G3O43432 1585 aaKnown RBP16.52■□□□□ 0.24
LIN54-201ENST00000340417 ABTB2Q8N961 1025 aa16.52■□□□□ 0.24
LIN54-201ENST00000340417 STRN4Q9NRL3 753 aa16.52■□□□□ 0.24
LIN54-201ENST00000340417 PMFBP1Q8TBY8 1022 aa16.52■□□□□ 0.23
LIN54-201ENST00000340417 STK31Q9BXU1 1019 aa16.52■□□□□ 0.23
LIN54-201ENST00000340417 RAPGEF4Q8WZA2 1011 aa16.51■□□□□ 0.23
LIN54-201ENST00000340417 RALBP1Q15311 655 aa16.51■□□□□ 0.23
LIN54-201ENST00000340417 LMOD3Q0VAK6 560 aa16.51■□□□□ 0.23
LIN54-201ENST00000340417 TTC5Q8N0Z6 440 aa16.5■□□□□ 0.23
LIN54-201ENST00000340417 CABP2Q9NPB3 220 aa16.5■□□□□ 0.23
LIN54-201ENST00000340417 CCDC141Q6ZP82 1450 aa16.5■□□□□ 0.23
LIN54-201ENST00000340417 BIVM-ERCC5R4GMW8 1640 aa16.5■□□□□ 0.23
LIN54-201ENST00000340417 SUPT6HQ7KZ85 1726 aaKnown RBP16.5■□□□□ 0.23
LIN54-201ENST00000340417 PRAM1Q96QH2 718 aa16.49■□□□□ 0.23
LIN54-201ENST00000340417 GTF3C3Q9Y5Q9 886 aa16.49■□□□□ 0.23
LIN54-201ENST00000340417 TEFQ10587 303 aa16.49■□□□□ 0.23
LIN54-201ENST00000340417 CFAP70Q5T0N1 1121 aa16.49■□□□□ 0.23
LIN54-201ENST00000340417 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
LIN54-201ENST00000340417 PANK3Q9H999 370 aa16.48■□□□□ 0.23
LIN54-201ENST00000340417 CHMP3Q9Y3E7 222 aa16.48■□□□□ 0.23
LIN54-201ENST00000340417 IRX6P78412 446 aaPredicted RBP16.46■□□□□ 0.23
LIN54-201ENST00000340417 FBXO31Q5XUX0 539 aaPredicted RBP16.46■□□□□ 0.22
LIN54-201ENST00000340417 CASC1Q6TDU7 716 aa16.46■□□□□ 0.22
LIN54-201ENST00000340417 WDR7Q9Y4E6 1490 aa16.46■□□□□ 0.22
LIN54-201ENST00000340417 DAPK1P53355 1430 aa16.44■□□□□ 0.22
LIN54-201ENST00000340417 UBAP1LF5GYI3 381 aa16.44■□□□□ 0.22
LIN54-201ENST00000340417 ANP32AP39687 249 aaKnown RBP16.44■□□□□ 0.22
LIN54-201ENST00000340417 RPGRIP1LQ68CZ1 1315 aa16.43■□□□□ 0.22
LIN54-201ENST00000340417 ERBINQ96RT1 1412 aa16.43■□□□□ 0.22
LIN54-201ENST00000340417 USP47Q96K76 1375 aa16.43■□□□□ 0.22
LIN54-201ENST00000340417 ADAMTS12P58397 1594 aa16.42■□□□□ 0.22
LIN54-201ENST00000340417 HFM1A2PYH4 1435 aa16.42■□□□□ 0.22
LIN54-201ENST00000340417 ISY1Q9ULR0 285 aaKnown RBP16.41■□□□□ 0.22
LIN54-201ENST00000340417 TOM1O60784 492 aa16.41■□□□□ 0.22
LIN54-201ENST00000340417 XPCQ01831 940 aaPredicted RBP16.41■□□□□ 0.22
LIN54-201ENST00000340417 IPO8O15397 1037 aaKnown RBP16.4■□□□□ 0.22
LIN54-201ENST00000340417 PRDM11Q9NQV5 511 aa16.4■□□□□ 0.22
LIN54-201ENST00000340417 TIAM1Q13009 1591 aa16.4■□□□□ 0.22
LIN54-201ENST00000340417 CAMSAP2Q08AD1 1489 aa16.4■□□□□ 0.22
LIN54-201ENST00000340417 NLRP13Q86W25 1043 aa16.4■□□□□ 0.22
LIN54-201ENST00000340417 PCF11O94913 1555 aaKnown RBP16.39■□□□□ 0.22
LIN54-201ENST00000340417 TOM1L2Q6ZVM7 507 aa16.39■□□□□ 0.21
LIN54-201ENST00000340417 CCDC146Q8IYE0 955 aa16.39■□□□□ 0.21
LIN54-201ENST00000340417 CDK19Q9BWU1 502 aa16.38■□□□□ 0.21
LIN54-201ENST00000340417 GORABQ5T7V8 394 aa16.38■□□□□ 0.21
LIN54-201ENST00000340417 TNRQ92752 1358 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms