RNA–Protein interactions for RNA: ENST00000339600.5

NDUFA4-201, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA4, Length 2,130 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-201ENST00000339600 WWC1Q8IX03 1113 aa9.16□□□□□ -0.94
NDUFA4-201ENST00000339600 TRIM44Q96DX7 344 aaPredicted RBP9.16□□□□□ -0.94
NDUFA4-201ENST00000339600 FBXO3Q9UK99 471 aa9.16□□□□□ -0.94
NDUFA4-201ENST00000339600 HDAC5Q9UQL6 1122 aa9.16□□□□□ -0.94
NDUFA4-201ENST00000339600 FBLN2P98095 1184 aa9.16□□□□□ -0.94
NDUFA4-201ENST00000339600 IRX5P78411 483 aaPredicted RBP9.15□□□□□ -0.94
NDUFA4-201ENST00000339600 DNAJC2Q99543 621 aaKnown RBP9.15□□□□□ -0.94
NDUFA4-201ENST00000339600 HIRIP3Q9BW71 556 aaPredicted RBP9.15□□□□□ -0.94
NDUFA4-201ENST00000339600 GRPEL1Q9HAV7 217 aa9.15□□□□□ -0.94
NDUFA4-201ENST00000339600 MAGI1Q96QZ7 1491 aaPredicted RBP9.15□□□□□ -0.94
NDUFA4-201ENST00000339600 ZBTB22O15209 634 aa9.14□□□□□ -0.95
NDUFA4-201ENST00000339600 GRIPAP1Q4V328 841 aa9.14□□□□□ -0.95
NDUFA4-201ENST00000339600 AXDND1Q5T1B0 1012 aaPredicted RBP9.14□□□□□ -0.95
NDUFA4-201ENST00000339600 ZNF622Q969S3 477 aaKnown RBP eCLIP9.14□□□□□ -0.95
NDUFA4-201ENST00000339600 NCOA2Q15596 1464 aa9.14□□□□□ -0.95
NDUFA4-201ENST00000339600 UQCRHLA0A096LP55 91 aa9.14□□□□□ -0.95
NDUFA4-201ENST00000339600 UQCRHP07919 91 aa9.14□□□□□ -0.95
NDUFA4-201ENST00000339600 ZSCAN30Q86W11 494 aa9.14□□□□□ -0.95
NDUFA4-201ENST00000339600 YY1AP1Q9H869 796 aa9.14□□□□□ -0.95
NDUFA4-201ENST00000339600 SOX12O15370 315 aa9.13□□□□□ -0.95
NDUFA4-201ENST00000339600 POLA1P09884 1462 aaPredicted RBP9.13□□□□□ -0.95
NDUFA4-201ENST00000339600 SNAPC4Q5SXM2 1469 aa9.13□□□□□ -0.95
NDUFA4-201ENST00000339600 VIRMAQ69YN4 1812 aaKnown RBP9.13□□□□□ -0.95
NDUFA4-201ENST00000339600 E9PSI1 815 aa9.12□□□□□ -0.95
NDUFA4-201ENST00000339600 ANTXR1Q9H6X2 564 aa9.12□□□□□ -0.95
NDUFA4-201ENST00000339600 FAM193AP78312 1265 aa9.11□□□□□ -0.95
NDUFA4-201ENST00000339600 FAM9BQ8IZU0 186 aa9.11□□□□□ -0.95
NDUFA4-201ENST00000339600 EXOC6Q8TAG9 804 aa9.11□□□□□ -0.95
NDUFA4-201ENST00000339600 TMC1Q8TDI8 760 aa9.11□□□□□ -0.95
NDUFA4-201ENST00000339600 GEMIN8Q9NWZ8 242 aaKnown RBP9.11□□□□□ -0.95
NDUFA4-201ENST00000339600 CGNQ9P2M7 1197 aaKnown RBP9.11□□□□□ -0.95
NDUFA4-201ENST00000339600 R3HCC1Q9Y3T6 440 aaKnown RBP9.11□□□□□ -0.95
NDUFA4-201ENST00000339600 RAB3GAP2Q9H2M9 1393 aa9.11□□□□□ -0.95
NDUFA4-201ENST00000339600 CNTLNQ9NXG0 1405 aa9.1□□□□□ -0.95
NDUFA4-201ENST00000339600 SYNJ2O15056 1496 aa9.1□□□□□ -0.95
NDUFA4-201ENST00000339600 MYCNP04198 464 aaPredicted RBP9.1□□□□□ -0.95
NDUFA4-201ENST00000339600 UBTFP17480 764 aaKnown RBP9.1□□□□□ -0.95
NDUFA4-201ENST00000339600 MAPK8IP2Q13387 824 aaPredicted RBP9.1□□□□□ -0.95
NDUFA4-201ENST00000339600 C8orf34Q49A92 452 aa9.1□□□□□ -0.95
NDUFA4-201ENST00000339600 PPP1R9BQ96SB3 815 aa9.1□□□□□ -0.95
NDUFA4-201ENST00000339600 PTMAP06454 111 aaKnown RBP9.1□□□□□ -0.95
NDUFA4-201ENST00000339600 RRP1P56182 461 aaKnown RBP9.1□□□□□ -0.95
NDUFA4-201ENST00000339600 FAM161AQ3B820 660 aa9.1□□□□□ -0.95
NDUFA4-201ENST00000339600 FHAD1B1AJZ9 1412 aa9.09□□□□□ -0.95
NDUFA4-201ENST00000339600 ZNF500O60304 480 aaPredicted RBP9.09□□□□□ -0.95
NDUFA4-201ENST00000339600 CCDC88BA6NC98 1476 aa9.09□□□□□ -0.95
NDUFA4-201ENST00000339600 KDM4FA0A1W2PPD8 638 aa9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 PTMSP20962 102 aa9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 NGEFQ8N5V2 710 aa9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 CHMP7Q8WUX9 453 aaPredicted RBP9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 PRKRIP1Q9H875 184 aaPredicted RBP9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 MRS2Q9HD23 443 aa9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 GRIN2BQ13224 1484 aa9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 KIF13AQ9H1H9 1805 aa9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 SOGA1O94964 1423 aa9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 MCM4P33991 863 aa9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 CCDC173Q0VFZ6 552 aa9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 CERS3Q8IU89 383 aa9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 ARID3AQ99856 593 aa9.08□□□□□ -0.96
NDUFA4-201ENST00000339600 ERICH3Q5RHP9 1530 aa9.07□□□□□ -0.96
NDUFA4-201ENST00000339600 TDRD9Q8NDG6 1382 aaKnown RBP9.07□□□□□ -0.96
NDUFA4-201ENST00000339600 KIF21BO75037 1637 aa9.07□□□□□ -0.96
NDUFA4-201ENST00000339600 BECN1Q14457 450 aa9.07□□□□□ -0.96
NDUFA4-201ENST00000339600 HS1BP3Q53T59 392 aa9.07□□□□□ -0.96
NDUFA4-201ENST00000339600 RAD54L2Q9Y4B4 1467 aa9.06□□□□□ -0.96
NDUFA4-201ENST00000339600 APPP05067 770 aa9.06□□□□□ -0.96
NDUFA4-201ENST00000339600 MSNP26038 577 aaKnown RBP9.06□□□□□ -0.96
NDUFA4-201ENST00000339600 RALBP1Q15311 655 aa9.06□□□□□ -0.96
NDUFA4-201ENST00000339600 SASS6Q6UVJ0 657 aa9.06□□□□□ -0.96
NDUFA4-201ENST00000339600 TULP2O00295 520 aa9.05□□□□□ -0.96
NDUFA4-201ENST00000339600 TRAK2O60296 914 aa9.05□□□□□ -0.96
NDUFA4-201ENST00000339600 CBX1P83916 185 aa9.05□□□□□ -0.96
NDUFA4-201ENST00000339600 TICAM2Q86XR7 235 aa9.05□□□□□ -0.96
NDUFA4-201ENST00000339600 KTN1Q86UP2 1357 aaKnown RBP9.05□□□□□ -0.96
NDUFA4-201ENST00000339600 CSPP1Q1MSJ5 1256 aa9.05□□□□□ -0.96
NDUFA4-201ENST00000339600 GZF1Q9H116 711 aaPredicted RBP9.05□□□□□ -0.96
NDUFA4-201ENST00000339600 MYOM3Q5VTT5 1437 aa9.05□□□□□ -0.96
NDUFA4-201ENST00000339600 KCNJ4P48050 445 aa9.04□□□□□ -0.96
NDUFA4-201ENST00000339600 TMED8Q6PL24 325 aaPredicted RBP9.04□□□□□ -0.96
NDUFA4-201ENST00000339600 PHF14O94880 888 aa9.04□□□□□ -0.96
NDUFA4-201ENST00000339600 ATP2B3Q16720 1220 aa9.04□□□□□ -0.96
NDUFA4-201ENST00000339600 CARD10Q9BWT7 1032 aa9.04□□□□□ -0.96
NDUFA4-201ENST00000339600 CCNB3Q8WWL7 1395 aa9.04□□□□□ -0.96
NDUFA4-201ENST00000339600 MCCP23508 829 aa9.03□□□□□ -0.96
NDUFA4-201ENST00000339600 NBPF1Q3BBV0 1214 aa9.03□□□□□ -0.96
NDUFA4-201ENST00000339600 AMER1Q5JTC6 1135 aaPredicted RBP9.03□□□□□ -0.96
NDUFA4-201ENST00000339600 AEBP1Q8IUX7 1158 aa9.03□□□□□ -0.96
NDUFA4-201ENST00000339600 TSPYL1Q9H0U9 437 aa9.03□□□□□ -0.96
NDUFA4-201ENST00000339600 USP19O94966 1318 aa9.03□□□□□ -0.96
NDUFA4-201ENST00000339600 KDM2BQ8NHM5 1336 aa9.03□□□□□ -0.96
NDUFA4-201ENST00000339600 SETD5Q9C0A6 1442 aa9.03□□□□□ -0.96
NDUFA4-201ENST00000339600 ERCC6L2Q5T890 1561 aa9.02□□□□□ -0.96
NDUFA4-201ENST00000339600 PATL2C9JE40 543 aaKnown RBP9.02□□□□□ -0.96
NDUFA4-201ENST00000339600 ABCA5Q8WWZ7 1642 aa9.02□□□□□ -0.97
NDUFA4-201ENST00000339600 NOL7Q9UMY1 257 aaKnown RBP9.02□□□□□ -0.97
NDUFA4-201ENST00000339600 CAPN2P17655 700 aa9.01□□□□□ -0.97
NDUFA4-201ENST00000339600 CC2D1BQ5T0F9 858 aaKnown RBP9.01□□□□□ -0.97
NDUFA4-201ENST00000339600 SKAP1Q86WV1 359 aa9.01□□□□□ -0.97
NDUFA4-201ENST00000339600 P3H3Q8IVL6 736 aa9.01□□□□□ -0.97
NDUFA4-201ENST00000339600 ZNF710Q8N1W2 664 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms