RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 BACH2Q9BYV9 841 aa21.3■■□□□ 1
SCARB1-202ENST00000339570 GPATCH8Q9UKJ3 1502 aaKnown RBP21.3■■□□□ 1
SCARB1-202ENST00000339570 TROQ12816 1431 aaPredicted RBP21.3■■□□□ 1
SCARB1-202ENST00000339570 TARBP1Q13395 1621 aaKnown RBP21.3■■□□□ 1
SCARB1-202ENST00000339570 BRD4O60885 1362 aaPredicted RBP21.29■■□□□ 1
SCARB1-202ENST00000339570 DISP1Q96F81 1524 aa21.29■■□□□ 1
SCARB1-202ENST00000339570 CCDC146Q8IYE0 955 aa21.28■■□□□ 1
SCARB1-202ENST00000339570 KIF14Q15058 1648 aa21.27■□□□□ 0.99
SCARB1-202ENST00000339570 ADAMTS8Q9UP79 889 aa21.26■□□□□ 0.99
SCARB1-202ENST00000339570 PBRM1Q86U86 1689 aa21.26■□□□□ 0.99
SCARB1-202ENST00000339570 ADAMTS12P58397 1594 aa21.25■□□□□ 0.99
SCARB1-202ENST00000339570 KDM5CP41229 1560 aa21.24■□□□□ 0.99
SCARB1-202ENST00000339570 C9orf84Q5VXU9 1444 aa21.24■□□□□ 0.99
SCARB1-202ENST00000339570 LRPPRCP42704 1394 aaKnown RBP21.23■□□□□ 0.99
SCARB1-202ENST00000339570 WDR43Q15061 677 aaKnown RBP eCLIP21.22■□□□□ 0.998e-6■■□□□ 11.7
SCARB1-202ENST00000339570 MBD5Q9P267 1494 aa21.22■□□□□ 0.99
SCARB1-202ENST00000339570 KIAA0586Q9BVV6 1533 aa21.22■□□□□ 0.99
SCARB1-202ENST00000339570 RAPGEF6Q8TEU7 1601 aa21.21■□□□□ 0.99
SCARB1-202ENST00000339570 DISP3Q9P2K9 1392 aa21.21■□□□□ 0.99
SCARB1-202ENST00000339570 ARID4BQ4LE39 1312 aaPredicted RBP21.21■□□□□ 0.99
SCARB1-202ENST00000339570 KIAA0556O60303 1618 aa21.21■□□□□ 0.99
SCARB1-202ENST00000339570 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
SCARB1-202ENST00000339570 BRPF3Q9ULD4 1205 aa21.19■□□□□ 0.98
SCARB1-202ENST00000339570 RALGAPBQ86X10 1494 aa21.18■□□□□ 0.98
SCARB1-202ENST00000339570 PER1O15534 1290 aaPredicted RBP21.18■□□□□ 0.98
SCARB1-202ENST00000339570 ARXQ96QS3 562 aa21.17■□□□□ 0.98
SCARB1-202ENST00000339570 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
SCARB1-202ENST00000339570 NEUROD2Q15784 382 aa21.16■□□□□ 0.98
SCARB1-202ENST00000339570 KNSTRNQ9Y448 316 aa21.16■□□□□ 0.98
SCARB1-202ENST00000339570 TMF1P82094 1093 aa21.14■□□□□ 0.98
SCARB1-202ENST00000339570 TNNT2P45379 298 aaPredicted RBP21.14■□□□□ 0.97
SCARB1-202ENST00000339570 PDE3BQ13370 1112 aa21.13■□□□□ 0.97
SCARB1-202ENST00000339570 AEBP2Q6ZN18 517 aaPredicted RBP21.13■□□□□ 0.97
SCARB1-202ENST00000339570 GRIN2AQ12879 1464 aa21.12■□□□□ 0.97
SCARB1-202ENST00000339570 POLR1AO95602 1720 aaPredicted RBP21.12■□□□□ 0.97
SCARB1-202ENST00000339570 MRC2Q9UBG0 1479 aa21.11■□□□□ 0.97
SCARB1-202ENST00000339570 PARD3Q8TEW0 1356 aa21.1■□□□□ 0.97
SCARB1-202ENST00000339570 NFKBIBQ15653 356 aa21.1■□□□□ 0.97
SCARB1-202ENST00000339570 PPM1GO15355 546 aaPredicted RBP21.1■□□□□ 0.97
SCARB1-202ENST00000339570 TESK2Q96S53 571 aa21.1■□□□□ 0.97
SCARB1-202ENST00000339570 BCAR3O75815 825 aa21.09■□□□□ 0.97
SCARB1-202ENST00000339570 MS4A1P11836 297 aa21.08■□□□□ 0.97
SCARB1-202ENST00000339570 CANXP27824 592 aaKnown RBP21.07■□□□□ 0.96
SCARB1-202ENST00000339570 CARMIL2Q6F5E8 1435 aa21.07■□□□□ 0.96
SCARB1-202ENST00000339570 UHRF1BP1Q6BDS2 1440 aa21.07■□□□□ 0.96
SCARB1-202ENST00000339570 APAF1O14727 1248 aa21.07■□□□□ 0.96
SCARB1-202ENST00000339570 PPP2R1AP30153 589 aa21.05■□□□□ 0.96
SCARB1-202ENST00000339570 FRAT1Q92837 279 aaPredicted RBP21.05■□□□□ 0.96
SCARB1-202ENST00000339570 SPINK5Q9NQ38 1064 aaPredicted RBP21.05■□□□□ 0.96
SCARB1-202ENST00000339570 EIF5BO60841 1220 aaKnown RBP21.05■□□□□ 0.96
SCARB1-202ENST00000339570 DDRGK1Q96HY6 314 aa21.05■□□□□ 0.96
SCARB1-202ENST00000339570 PLEKHH1Q9ULM0 1364 aa21.05■□□□□ 0.96
SCARB1-202ENST00000339570 GOLGA2Q08379 1002 aa21.04■□□□□ 0.96
SCARB1-202ENST00000339570 FRAT2O75474 233 aaPredicted RBP21.04■□□□□ 0.96
SCARB1-202ENST00000339570 ERCC6Q03468 1493 aa21.03■□□□□ 0.96
SCARB1-202ENST00000339570 PRAG1Q86YV5 1406 aa21.03■□□□□ 0.96
SCARB1-202ENST00000339570 RRP7AQ9Y3A4 280 aaKnown RBP21.03■□□□□ 0.96
SCARB1-202ENST00000339570 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
SCARB1-202ENST00000339570 DUSP27Q5VZP5 1158 aa21.02■□□□□ 0.96
SCARB1-202ENST00000339570 SPRYD3Q8NCJ5 442 aa21.01■□□□□ 0.95
SCARB1-202ENST00000339570 ATP10BO94823 1461 aa21.01■□□□□ 0.95
SCARB1-202ENST00000339570 ADGRL2O95490 1459 aa21.01■□□□□ 0.95
SCARB1-202ENST00000339570 ERBINQ96RT1 1412 aa21.01■□□□□ 0.95
SCARB1-202ENST00000339570 SLKQ9H2G2 1235 aaPredicted RBP21.01■□□□□ 0.95
SCARB1-202ENST00000339570 GSE1Q14687 1217 aa21.01■□□□□ 0.95
SCARB1-202ENST00000339570 BCL2L13Q9BXK5 485 aa21.01■□□□□ 0.95
SCARB1-202ENST00000339570 IFT140Q96RY7 1462 aa21■□□□□ 0.95
SCARB1-202ENST00000339570 ADGBQ8N7X0 1667 aa21■□□□□ 0.95
SCARB1-202ENST00000339570 DMRT2Q9Y5R5 561 aa20.99■□□□□ 0.95
SCARB1-202ENST00000339570 ITSN2Q9NZM3 1697 aa20.98■□□□□ 0.95
SCARB1-202ENST00000339570 FAM161AQ3B820 660 aa20.98■□□□□ 0.95
SCARB1-202ENST00000339570 CENPQQ7L2Z9 268 aaPredicted RBP20.97■□□□□ 0.95
SCARB1-202ENST00000339570 PANK1Q8TE04 598 aa20.97■□□□□ 0.95
SCARB1-202ENST00000339570 COG6Q9Y2V7 657 aa20.97■□□□□ 0.95
SCARB1-202ENST00000339570 CHGAP10645 457 aaKnown RBP20.97■□□□□ 0.95
SCARB1-202ENST00000339570 FAM135AQ9P2D6 1515 aa20.96■□□□□ 0.95
SCARB1-202ENST00000339570 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.96■□□□□ 0.95
SCARB1-202ENST00000339570 C8orf34Q49A92 452 aa20.96■□□□□ 0.95
SCARB1-202ENST00000339570 CLUAP1Q96AJ1 413 aa20.95■□□□□ 0.94
SCARB1-202ENST00000339570 A2MP01023 1474 aa20.95■□□□□ 0.94
SCARB1-202ENST00000339570 PLEKHH2Q8IVE3 1493 aa20.95■□□□□ 0.94
SCARB1-202ENST00000339570 USP35Q9P2H5 1018 aa20.94■□□□□ 0.94
SCARB1-202ENST00000339570 CEP170Q5SW79 1584 aa20.94■□□□□ 0.94
SCARB1-202ENST00000339570 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
SCARB1-202ENST00000339570 IGHDP01880 384 aa20.93■□□□□ 0.94
SCARB1-202ENST00000339570 ARHGEF12Q9NZN5 1544 aa20.93■□□□□ 0.94
SCARB1-202ENST00000339570 PTPRGP23470 1445 aa20.92■□□□□ 0.94
SCARB1-202ENST00000339570 KDM2BQ8NHM5 1336 aa20.91■□□□□ 0.94
SCARB1-202ENST00000339570 SEC24BO95487 1268 aa20.91■□□□□ 0.94
SCARB1-202ENST00000339570 PLA2R1Q13018 1463 aa20.9■□□□□ 0.94
SCARB1-202ENST00000339570 CDC42BPAQ5VT25 1732 aa20.9■□□□□ 0.94
SCARB1-202ENST00000339570 PRKCSHP14314 528 aaPredicted RBP20.89■□□□□ 0.93
SCARB1-202ENST00000339570 TNNQ9UQP3 1299 aa20.89■□□□□ 0.93
SCARB1-202ENST00000339570 KDM5DQ9BY66 1539 aa20.89■□□□□ 0.93
SCARB1-202ENST00000339570 AMER1Q5JTC6 1135 aaPredicted RBP20.89■□□□□ 0.93
SCARB1-202ENST00000339570 COL17A1Q9UMD9 1497 aaPredicted RBP20.89■□□□□ 0.93
SCARB1-202ENST00000339570 CROCC2H7BZ55 1655 aa20.88■□□□□ 0.93
SCARB1-202ENST00000339570 SLFN5Q08AF3 891 aa20.88■□□□□ 0.93
SCARB1-202ENST00000339570 AFAP1Q8N556 730 aa20.88■□□□□ 0.93
SCARB1-202ENST00000339570 ABCC10Q5T3U5 1492 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms