RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 TRIM44Q96DX7 344 aaPredicted RBP12.1□□□□□ -0.47
RPGR-202ENST00000339363 BACH2Q9BYV9 841 aa12.1□□□□□ -0.47
RPGR-202ENST00000339363 GZF1Q9H116 711 aaPredicted RBP12.1□□□□□ -0.47
RPGR-202ENST00000339363 IFT140Q96RY7 1462 aa12.09□□□□□ -0.47
RPGR-202ENST00000339363 C20orf194Q5TEA3 1177 aa12.09□□□□□ -0.47
RPGR-202ENST00000339363 TMC1Q8TDI8 760 aa12.09□□□□□ -0.47
RPGR-202ENST00000339363 NUP153P49790 1475 aaKnown RBP12.08□□□□□ -0.48
RPGR-202ENST00000339363 KDM5CP41229 1560 aa12.08□□□□□ -0.48
RPGR-202ENST00000339363 TARBP1Q13395 1621 aaKnown RBP12.08□□□□□ -0.48
RPGR-202ENST00000339363 SLKQ9H2G2 1235 aaPredicted RBP12.07□□□□□ -0.48
RPGR-202ENST00000339363 ZNF608Q9ULD9 1512 aaPredicted RBP12.07□□□□□ -0.48
RPGR-202ENST00000339363 MIA2Q96PC5 1412 aa12.07□□□□□ -0.48
RPGR-202ENST00000339363 POLR1AO95602 1720 aaPredicted RBP12.07□□□□□ -0.48
RPGR-202ENST00000339363 RRP1P56182 461 aaKnown RBP12.06□□□□□ -0.48
RPGR-202ENST00000339363 NBPF1Q3BBV0 1214 aa12.06□□□□□ -0.48
RPGR-202ENST00000339363 DNMT1P26358 1616 aaKnown RBP12.06□□□□□ -0.48
RPGR-202ENST00000339363 CARD11Q9BXL7 1154 aa12.06□□□□□ -0.48
RPGR-202ENST00000339363 IQGAP2Q13576 1575 aa12.05□□□□□ -0.48
RPGR-202ENST00000339363 DISP1Q96F81 1524 aa12.05□□□□□ -0.48
RPGR-202ENST00000339363 RGS3P49796 1198 aa12.05□□□□□ -0.48
RPGR-202ENST00000339363 POGKQ9P215 609 aa12.05□□□□□ -0.48
RPGR-202ENST00000339363 LRPPRCP42704 1394 aaKnown RBP12.04□□□□□ -0.48
RPGR-202ENST00000339363 GOLGA6L3A6NEY3 463 aa12.04□□□□□ -0.48
RPGR-202ENST00000339363 KIF14Q15058 1648 aa12.04□□□□□ -0.48
RPGR-202ENST00000339363 MS4A1P11836 297 aa12.03□□□□□ -0.48
RPGR-202ENST00000339363 ROCK1Q13464 1354 aa12.03□□□□□ -0.48
RPGR-202ENST00000339363 PLB1Q6P1J6 1458 aa12.03□□□□□ -0.48
RPGR-202ENST00000339363 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
RPGR-202ENST00000339363 CC2D1BQ5T0F9 858 aaKnown RBP12.02□□□□□ -0.48
RPGR-202ENST00000339363 CFDP1Q9UEE9 299 aaPredicted RBP12.02□□□□□ -0.48
RPGR-202ENST00000339363 KIAA0586Q9BVV6 1533 aa12.02□□□□□ -0.48
RPGR-202ENST00000339363 CAMSAP2Q08AD1 1489 aa12.02□□□□□ -0.49
RPGR-202ENST00000339363 RCAN3Q9UKA8 241 aa12.02□□□□□ -0.49
RPGR-202ENST00000339363 RGL3Q3MIN7 710 aa12.01□□□□□ -0.49
RPGR-202ENST00000339363 KIAA1107Q9UPP5 1409 aa12.01□□□□□ -0.49
RPGR-202ENST00000339363 AAMPQ13685 434 aa12□□□□□ -0.49
RPGR-202ENST00000339363 CRBNQ96SW2 442 aa12□□□□□ -0.49
RPGR-202ENST00000339363 GPATCH8Q9UKJ3 1502 aaKnown RBP11.99□□□□□ -0.49
RPGR-202ENST00000339363 PER1O15534 1290 aaPredicted RBP11.99□□□□□ -0.49
RPGR-202ENST00000339363 FGD1P98174 961 aa11.99□□□□□ -0.49
RPGR-202ENST00000339363 BECN1Q14457 450 aa11.99□□□□□ -0.49
RPGR-202ENST00000339363 PBRM1Q86U86 1689 aa11.99□□□□□ -0.49
RPGR-202ENST00000339363 NUP155O75694 1391 aa11.99□□□□□ -0.49
RPGR-202ENST00000339363 MYH16Q9H6N6 1097 aa11.98□□□□□ -0.49
RPGR-202ENST00000339363 SPRYD3Q8NCJ5 442 aa11.98□□□□□ -0.49
RPGR-202ENST00000339363 HNRNPMP52272 730 aaKnown RBP eCLIP11.98□□□□□ -0.49
RPGR-202ENST00000339363 FAM13BQ9NYF5 915 aa11.98□□□□□ -0.49
RPGR-202ENST00000339363 ADAMTS12P58397 1594 aa11.97□□□□□ -0.49
RPGR-202ENST00000339363 MYBBP1AQ9BQG0 1328 aaKnown RBP11.97□□□□□ -0.49
RPGR-202ENST00000339363 DISP3Q9P2K9 1392 aa11.96□□□□□ -0.49
RPGR-202ENST00000339363 TNNT2P45379 298 aaPredicted RBP11.96□□□□□ -0.5
RPGR-202ENST00000339363 ANP32BQ92688 251 aaKnown RBP11.95□□□□□ -0.5
RPGR-202ENST00000339363 BCL11BQ9C0K0 894 aaPredicted RBP11.95□□□□□ -0.5
RPGR-202ENST00000339363 ANKRD50Q9ULJ7 1429 aa11.95□□□□□ -0.5
RPGR-202ENST00000339363 RIMBP3CA6NJZ7 1639 aa11.95□□□□□ -0.5
RPGR-202ENST00000339363 RIMBP3BA6NNM3 1639 aa11.95□□□□□ -0.5
RPGR-202ENST00000339363 RIMBP3Q9UFD9 1639 aa11.95□□□□□ -0.5
RPGR-202ENST00000339363 PDCL3Q9H2J4 239 aa11.95□□□□□ -0.5
RPGR-202ENST00000339363 KIF15Q9NS87 1388 aa11.95□□□□□ -0.5
RPGR-202ENST00000339363 KIAA0556O60303 1618 aa11.94□□□□□ -0.5
RPGR-202ENST00000339363 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
RPGR-202ENST00000339363 CLCN1P35523 988 aa11.94□□□□□ -0.5
RPGR-202ENST00000339363 RALGAPBQ86X10 1494 aa11.94□□□□□ -0.5
RPGR-202ENST00000339363 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
RPGR-202ENST00000339363 PDIA4P13667 645 aaKnown RBP11.92□□□□□ -0.5
RPGR-202ENST00000339363 FBLN2P98095 1184 aa11.92□□□□□ -0.5
RPGR-202ENST00000339363 ZHX1Q9UKY1 873 aaPredicted RBP11.92□□□□□ -0.5
RPGR-202ENST00000339363 ROCK2O75116 1388 aaKnown RBP11.92□□□□□ -0.5
RPGR-202ENST00000339363 UHRF1BP1Q6BDS2 1440 aa11.92□□□□□ -0.5
RPGR-202ENST00000339363 BBXQ8WY36 941 aaPredicted RBP11.92□□□□□ -0.5
RPGR-202ENST00000339363 PANK2Q9BZ23 570 aa11.92□□□□□ -0.5
RPGR-202ENST00000339363 ADAMTS8Q9UP79 889 aa11.92□□□□□ -0.5
RPGR-202ENST00000339363 BRD4O60885 1362 aaPredicted RBP11.92□□□□□ -0.5
RPGR-202ENST00000339363 PARD3Q8TEW0 1356 aa11.92□□□□□ -0.5
RPGR-202ENST00000339363 RAPGEF6Q8TEU7 1601 aa11.91□□□□□ -0.5
RPGR-202ENST00000339363 TESK2Q96S53 571 aa11.91□□□□□ -0.5
RPGR-202ENST00000339363 PANK3Q9H999 370 aa11.91□□□□□ -0.5
RPGR-202ENST00000339363 E9PCH4 1651 aa11.91□□□□□ -0.5
RPGR-202ENST00000339363 TPM2P07951 284 aa11.91□□□□□ -0.5
RPGR-202ENST00000339363 FAM161AQ3B820 660 aa11.91□□□□□ -0.5
RPGR-202ENST00000339363 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
RPGR-202ENST00000339363 ESPNB1AK53 854 aa11.91□□□□□ -0.5
RPGR-202ENST00000339363 UPF2Q9HAU5 1272 aaKnown RBP11.91□□□□□ -0.5
RPGR-202ENST00000339363 PLEKHH1Q9ULM0 1364 aa11.91□□□□□ -0.5
RPGR-202ENST00000339363 TROQ12816 1431 aaPredicted RBP11.9□□□□□ -0.5
RPGR-202ENST00000339363 KIAA1211Q6ZU35 1233 aa11.89□□□□□ -0.51
RPGR-202ENST00000339363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.89□□□□□ -0.51
RPGR-202ENST00000339363 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
RPGR-202ENST00000339363 NCLP19338 710 aaKnown RBP11.89□□□□□ -0.51
RPGR-202ENST00000339363 PLA2R1Q13018 1463 aa11.89□□□□□ -0.51
RPGR-202ENST00000339363 XRCC6P12956 609 aaKnown RBP eCLIP11.89□□□□□ -0.51
RPGR-202ENST00000339363 NLRP13Q86W25 1043 aa11.89□□□□□ -0.51
RPGR-202ENST00000339363 MSNP26038 577 aaKnown RBP11.88□□□□□ -0.51
RPGR-202ENST00000339363 CANXP27824 592 aaKnown RBP11.88□□□□□ -0.51
RPGR-202ENST00000339363 OSCARQ8IYS5 282 aa11.88□□□□□ -0.51
RPGR-202ENST00000339363 CHD1O14646 1710 aa11.88□□□□□ -0.51
RPGR-202ENST00000339363 CALD1Q05682 793 aaKnown RBP11.88□□□□□ -0.51
RPGR-202ENST00000339363 CDC42BPAQ5VT25 1732 aa11.87□□□□□ -0.51
RPGR-202ENST00000339363 CLASP1Q7Z460 1538 aa11.87□□□□□ -0.51
RPGR-202ENST00000339363 C9orf84Q5VXU9 1444 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms