RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 LTBP4Q8N2S1 1624 aa27■■□□□ 1.91
VSTM1-201ENST00000338372 TSPY4P0CV99 314 aa26.99■■□□□ 1.91
VSTM1-201ENST00000338372 TSPY10P0CW01 314 aa26.99■■□□□ 1.91
VSTM1-201ENST00000338372 KDM5DQ9BY66 1539 aa26.98■■□□□ 1.91
VSTM1-201ENST00000338372 RNF17Q9BXT8 1623 aaKnown RBP26.98■■□□□ 1.91
VSTM1-201ENST00000338372 PLA2R1Q13018 1463 aa26.96■■□□□ 1.91
VSTM1-201ENST00000338372 TCOF1Q13428 1488 aaKnown RBP26.96■■□□□ 1.91
VSTM1-201ENST00000338372 PZPP20742 1482 aa26.95■■□□□ 1.91
VSTM1-201ENST00000338372 DNMT1P26358 1616 aaKnown RBP26.95■■□□□ 1.91
VSTM1-201ENST00000338372 FBXO31Q5XUX0 539 aaPredicted RBP26.94■■□□□ 1.9
VSTM1-201ENST00000338372 MROH1Q8NDA8 1641 aa26.94■■□□□ 1.9
VSTM1-201ENST00000338372 A2ML1A8K2U0 1454 aa26.93■■□□□ 1.9
VSTM1-201ENST00000338372 NCKAP5LQ9HCH0 1330 aa26.93■■□□□ 1.9
VSTM1-201ENST00000338372 EIF2AK4Q9P2K8 1649 aaKnown RBP26.92■■□□□ 1.9
VSTM1-201ENST00000338372 PTPN23Q9H3S7 1636 aa26.9■■□□□ 1.9
VSTM1-201ENST00000338372 ABCC5O15440 1437 aa26.9■■□□□ 1.9
VSTM1-201ENST00000338372 CROCC2H7BZ55 1655 aa26.89■■□□□ 1.9
VSTM1-201ENST00000338372 WASHC2CQ9Y4E1 1318 aa26.89■■□□□ 1.89
VSTM1-201ENST00000338372 TNRQ92752 1358 aa26.87■■□□□ 1.89
VSTM1-201ENST00000338372 ABCC3O15438 1527 aa26.87■■□□□ 1.89
VSTM1-201ENST00000338372 PKD2Q13563 968 aa26.86■■□□□ 1.89
VSTM1-201ENST00000338372 SHANK2Q9UPX8 1470 aa26.85■■□□□ 1.89
VSTM1-201ENST00000338372 ZC3H13Q5T200 1668 aaKnown RBP26.85■■□□□ 1.89
VSTM1-201ENST00000338372 DUOX2Q9NRD8 1548 aa26.84■■□□□ 1.89
VSTM1-201ENST00000338372 FGD6Q6ZV73 1430 aa26.82■■□□□ 1.88
VSTM1-201ENST00000338372 NEURL4Q96JN8 1562 aa26.81■■□□□ 1.88
VSTM1-201ENST00000338372 CEP152O94986 1710 aa26.81■■□□□ 1.88
VSTM1-201ENST00000338372 IQSEC2Q5JU85 1478 aa26.81■■□□□ 1.88
VSTM1-201ENST00000338372 SPATA31D1Q6ZQQ2 1576 aa26.8■■□□□ 1.88
VSTM1-201ENST00000338372 DAPK1P53355 1430 aa26.8■■□□□ 1.88
VSTM1-201ENST00000338372 POLR1AO95602 1720 aaPredicted RBP26.79■■□□□ 1.88
VSTM1-201ENST00000338372 ZNF335Q9H4Z2 1342 aaPredicted RBP26.78■■□□□ 1.88
VSTM1-201ENST00000338372 CFAP65Q6ZU64 1925 aaKnown RBP26.77■■□□□ 1.88
VSTM1-201ENST00000338372 NLRP1Q9C000 1473 aa26.77■■□□□ 1.88
VSTM1-201ENST00000338372 APLP2Q06481 763 aa26.77■■□□□ 1.88
VSTM1-201ENST00000338372 KIF15Q9NS87 1388 aa26.76■■□□□ 1.87
VSTM1-201ENST00000338372 DEPDC5O75140 1603 aa26.75■■□□□ 1.87
VSTM1-201ENST00000338372 PRDM15P57071 1507 aaPredicted RBP26.75■■□□□ 1.87
VSTM1-201ENST00000338372 ERVK-7P63135 1459 aa26.74■■□□□ 1.87
VSTM1-201ENST00000338372 ERBINQ96RT1 1412 aa26.73■■□□□ 1.87
VSTM1-201ENST00000338372 UGGT1Q9NYU2 1555 aa26.71■■□□□ 1.87
VSTM1-201ENST00000338372 RRP7BPQ9NSQ0 103 aa26.71■■□□□ 1.87
VSTM1-201ENST00000338372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.71■■□□□ 1.87
VSTM1-201ENST00000338372 ARHGAP31Q2M1Z3 1444 aa26.69■■□□□ 1.86
VSTM1-201ENST00000338372 MED14O60244 1454 aa26.68■■□□□ 1.86
VSTM1-201ENST00000338372 VWDEQ8N2E2 1590 aa26.67■■□□□ 1.86
VSTM1-201ENST00000338372 THEMISQ8N1K5 641 aaPredicted RBP26.67■■□□□ 1.86
VSTM1-201ENST00000338372 UBR1Q8IWV7 1749 aa26.65■■□□□ 1.86
VSTM1-201ENST00000338372 ADGRL2O95490 1459 aa26.65■■□□□ 1.86
VSTM1-201ENST00000338372 ANKLE2Q86XL3 938 aa26.63■■□□□ 1.85
VSTM1-201ENST00000338372 CHIC2Q9UKJ5 165 aa26.62■■□□□ 1.85
VSTM1-201ENST00000338372 LMTK2Q8IWU2 1503 aa26.61■■□□□ 1.85
VSTM1-201ENST00000338372 ANKRD30AQ9BXX3 1397 aa26.6■■□□□ 1.85
VSTM1-201ENST00000338372 NPHP4O75161 1426 aaPredicted RBP26.58■■□□□ 1.85
VSTM1-201ENST00000338372 IQGAP1P46940 1657 aa26.57■■□□□ 1.84
VSTM1-201ENST00000338372 STRCP1A6NGW2 1772 aa26.57■■□□□ 1.84
VSTM1-201ENST00000338372 ARHGAP23Q9P227 1491 aa26.56■■□□□ 1.84
VSTM1-201ENST00000338372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.54■■□□□ 1.84
VSTM1-201ENST00000338372 SLIT1O75093 1534 aa26.54■■□□□ 1.84
VSTM1-201ENST00000338372 CPS1P31327 1500 aa26.54■■□□□ 1.84
VSTM1-201ENST00000338372 PIK3C2BO00750 1634 aa26.53■■□□□ 1.84
VSTM1-201ENST00000338372 SYNMO15061 1565 aa26.5■■□□□ 1.83
VSTM1-201ENST00000338372 LTKP29376 864 aa26.5■■□□□ 1.83
VSTM1-201ENST00000338372 FAM50AQ14320 339 aaKnown RBP26.49■■□□□ 1.83
VSTM1-201ENST00000338372 KDM5AP29375 1690 aaKnown RBP26.49■■□□□ 1.83
VSTM1-201ENST00000338372 ALKQ9UM73 1620 aa26.49■■□□□ 1.83
VSTM1-201ENST00000338372 EFCAB6Q5THR3 1501 aa26.49■■□□□ 1.83
VSTM1-201ENST00000338372 NOS1P29475 1434 aa26.48■■□□□ 1.83
VSTM1-201ENST00000338372 KANK1Q14678 1352 aa26.48■■□□□ 1.83
VSTM1-201ENST00000338372 UBAP1LF5GYI3 381 aa26.48■■□□□ 1.83
VSTM1-201ENST00000338372 ANKRD50Q9ULJ7 1429 aa26.47■■□□□ 1.83
VSTM1-201ENST00000338372 SCAF11Q99590 1463 aaKnown RBP26.45■■□□□ 1.82
VSTM1-201ENST00000338372 IDI1Q13907 227 aa26.44■■□□□ 1.82
VSTM1-201ENST00000338372 TMEM2Q9UHN6 1383 aa26.41■■□□□ 1.82
VSTM1-201ENST00000338372 LRRC7Q96NW7 1537 aa26.4■■□□□ 1.82
VSTM1-201ENST00000338372 UNC13BO14795 1591 aa26.4■■□□□ 1.82
VSTM1-201ENST00000338372 TET3O43151 1660 aa26.39■■□□□ 1.82
VSTM1-201ENST00000338372 TXNDC2Q86VQ3 553 aa26.39■■□□□ 1.82
VSTM1-201ENST00000338372 ROCK1Q13464 1354 aa26.38■■□□□ 1.81
VSTM1-201ENST00000338372 XIRP1Q702N8 1843 aaKnown RBP26.37■■□□□ 1.81
VSTM1-201ENST00000338372 RPRD2Q5VT52 1461 aaKnown RBP26.36■■□□□ 1.81
VSTM1-201ENST00000338372 GCC2Q8IWJ2 1684 aa26.35■■□□□ 1.81
VSTM1-201ENST00000338372 MYO5BQ9ULV0 1848 aa26.34■■□□□ 1.81
VSTM1-201ENST00000338372 ADGRB3O60242 1522 aa26.34■■□□□ 1.81
VSTM1-201ENST00000338372 ILDR2Q71H61 639 aa26.32■■□□□ 1.8
VSTM1-201ENST00000338372 DISP3Q9P2K9 1392 aa26.32■■□□□ 1.8
VSTM1-201ENST00000338372 E9PCH4 1651 aa26.31■■□□□ 1.8
VSTM1-201ENST00000338372 SLC52A1Q9NWF4 448 aa26.31■■□□□ 1.8
VSTM1-201ENST00000338372 TOM1O60784 492 aa26.3■■□□□ 1.8
VSTM1-201ENST00000338372 PPARGC1BQ86YN6 1023 aaKnown RBP26.3■■□□□ 1.8
VSTM1-201ENST00000338372 IQGAP3Q86VI3 1631 aa26.29■■□□□ 1.8
VSTM1-201ENST00000338372 EID1Q9Y6B2 187 aa26.28■■□□□ 1.8
VSTM1-201ENST00000338372 TMEM131LA2VDJ0 1609 aa26.28■■□□□ 1.8
VSTM1-201ENST00000338372 HSPA1LP34931 641 aa26.27■■□□□ 1.8
VSTM1-201ENST00000338372 ZFYVE9O95405 1425 aa26.26■■□□□ 1.79
VSTM1-201ENST00000338372 PIP4K2BP78356 416 aa26.24■■□□□ 1.79
VSTM1-201ENST00000338372 STAG3Q9UJ98 1225 aa26.24■■□□□ 1.79
VSTM1-201ENST00000338372 RRBP1Q9P2E9 1410 aaKnown RBP26.2■■□□□ 1.78
VSTM1-201ENST00000338372 NWD1Q149M9 1564 aa26.17■■□□□ 1.78
VSTM1-201ENST00000338372 KCNA6P17658 529 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms