RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 CCDC141Q6ZP82 1450 aa18.53■□□□□ 0.56
CSMD2-202ENST00000338325 KDM5DQ9BY66 1539 aa18.52■□□□□ 0.56
CSMD2-202ENST00000338325 UBAP1LF5GYI3 381 aa18.51■□□□□ 0.55
CSMD2-202ENST00000338325 CAMSAP2Q08AD1 1489 aa18.51■□□□□ 0.55
CSMD2-202ENST00000338325 NEURL4Q96JN8 1562 aa18.5■□□□□ 0.55
CSMD2-202ENST00000338325 PZPP20742 1482 aa18.49■□□□□ 0.55
CSMD2-202ENST00000338325 NCOA2Q15596 1464 aa18.49■□□□□ 0.55
CSMD2-202ENST00000338325 TNRQ92752 1358 aa18.48■□□□□ 0.55
CSMD2-202ENST00000338325 KIF3BO15066 747 aa18.47■□□□□ 0.55
CSMD2-202ENST00000338325 ARHGEF5Q12774 1597 aa18.46■□□□□ 0.55
CSMD2-202ENST00000338325 CPS1P31327 1500 aa18.45■□□□□ 0.54
CSMD2-202ENST00000338325 FBXO31Q5XUX0 539 aaPredicted RBP18.44■□□□□ 0.54
CSMD2-202ENST00000338325 RSPH4AQ5TD94 716 aa18.44■□□□□ 0.54
CSMD2-202ENST00000338325 NLRP1Q9C000 1473 aa18.42■□□□□ 0.54
CSMD2-202ENST00000338325 WASHC2CQ9Y4E1 1318 aa18.42■□□□□ 0.54
CSMD2-202ENST00000338325 SHANK2Q9UPX8 1470 aa18.41■□□□□ 0.54
CSMD2-202ENST00000338325 RNF17Q9BXT8 1623 aaKnown RBP18.41■□□□□ 0.54
CSMD2-202ENST00000338325 ZC3H13Q5T200 1668 aaKnown RBP18.41■□□□□ 0.54
CSMD2-202ENST00000338325 DEPDC5O75140 1603 aa18.41■□□□□ 0.54
CSMD2-202ENST00000338325 UGGT1Q9NYU2 1555 aa18.4■□□□□ 0.54
CSMD2-202ENST00000338325 VWDEQ8N2E2 1590 aa18.4■□□□□ 0.54
CSMD2-202ENST00000338325 MIA2Q96PC5 1412 aa18.39■□□□□ 0.54
CSMD2-202ENST00000338325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.39■□□□□ 0.53
CSMD2-202ENST00000338325 MAST1Q9Y2H9 1570 aa18.39■□□□□ 0.53
CSMD2-202ENST00000338325 EIF2AK4Q9P2K8 1649 aaKnown RBP18.38■□□□□ 0.53
CSMD2-202ENST00000338325 ANKLE2Q86XL3 938 aa18.38■□□□□ 0.53
CSMD2-202ENST00000338325 IQGAP1P46940 1657 aa18.37■□□□□ 0.53
CSMD2-202ENST00000338325 MED14O60244 1454 aa18.37■□□□□ 0.53
CSMD2-202ENST00000338325 TSPY4P0CV99 314 aa18.36■□□□□ 0.53
CSMD2-202ENST00000338325 TSPY10P0CW01 314 aa18.36■□□□□ 0.53
CSMD2-202ENST00000338325 THEMISQ8N1K5 641 aaPredicted RBP18.36■□□□□ 0.53
CSMD2-202ENST00000338325 ABCC3O15438 1527 aa18.36■□□□□ 0.53
CSMD2-202ENST00000338325 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
CSMD2-202ENST00000338325 NPHP4O75161 1426 aaPredicted RBP18.35■□□□□ 0.53
CSMD2-202ENST00000338325 LRRC9Q6ZRR7 1453 aa18.35■□□□□ 0.53
CSMD2-202ENST00000338325 MED1Q15648 1581 aaPredicted RBP18.35■□□□□ 0.53
CSMD2-202ENST00000338325 TOM1O60784 492 aa18.34■□□□□ 0.53
CSMD2-202ENST00000338325 CEP152O94986 1710 aa18.33■□□□□ 0.53
CSMD2-202ENST00000338325 PIP4K2BP78356 416 aa18.33■□□□□ 0.53
CSMD2-202ENST00000338325 MROH1Q8NDA8 1641 aa18.33■□□□□ 0.52
CSMD2-202ENST00000338325 HSPA1LP34931 641 aa18.33■□□□□ 0.52
CSMD2-202ENST00000338325 ERVK-7P63135 1459 aa18.31■□□□□ 0.52
CSMD2-202ENST00000338325 VPS8Q8N3P4 1428 aa18.31■□□□□ 0.52
CSMD2-202ENST00000338325 STRCP1A6NGW2 1772 aa18.31■□□□□ 0.52
CSMD2-202ENST00000338325 ALKQ9UM73 1620 aa18.3■□□□□ 0.52
CSMD2-202ENST00000338325 SYNMO15061 1565 aa18.3■□□□□ 0.52
CSMD2-202ENST00000338325 UBR1Q8IWV7 1749 aa18.3■□□□□ 0.52
CSMD2-202ENST00000338325 CFAP65Q6ZU64 1925 aaKnown RBP18.29■□□□□ 0.52
CSMD2-202ENST00000338325 MAP3K1Q13233 1512 aa18.27■□□□□ 0.52
CSMD2-202ENST00000338325 DUOX2Q9NRD8 1548 aa18.27■□□□□ 0.51
CSMD2-202ENST00000338325 MYOM3Q5VTT5 1437 aa18.26■□□□□ 0.51
CSMD2-202ENST00000338325 CROCC2H7BZ55 1655 aa18.26■□□□□ 0.51
CSMD2-202ENST00000338325 LRRC7Q96NW7 1537 aa18.25■□□□□ 0.51
CSMD2-202ENST00000338325 PRDM15P57071 1507 aaPredicted RBP18.23■□□□□ 0.51
CSMD2-202ENST00000338325 SCAF11Q99590 1463 aaKnown RBP18.22■□□□□ 0.51
CSMD2-202ENST00000338325 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
CSMD2-202ENST00000338325 SLIT1O75093 1534 aa18.2■□□□□ 0.5
CSMD2-202ENST00000338325 ARHGAP23Q9P227 1491 aa18.2■□□□□ 0.5
CSMD2-202ENST00000338325 ARHGAP31Q2M1Z3 1444 aa18.19■□□□□ 0.5
CSMD2-202ENST00000338325 ERBINQ96RT1 1412 aa18.19■□□□□ 0.5
CSMD2-202ENST00000338325 XIRP1Q702N8 1843 aaKnown RBP18.18■□□□□ 0.5
CSMD2-202ENST00000338325 KIF15Q9NS87 1388 aa18.18■□□□□ 0.5
CSMD2-202ENST00000338325 PIK3C2BO00750 1634 aa18.18■□□□□ 0.5
CSMD2-202ENST00000338325 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
CSMD2-202ENST00000338325 PHF23Q9BUL5 403 aaPredicted RBP18.16■□□□□ 0.5
CSMD2-202ENST00000338325 ABCC5O15440 1437 aa18.15■□□□□ 0.5
CSMD2-202ENST00000338325 KDM5AP29375 1690 aaKnown RBP18.14■□□□□ 0.5
CSMD2-202ENST00000338325 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
CSMD2-202ENST00000338325 LTKP29376 864 aa18.13■□□□□ 0.49
CSMD2-202ENST00000338325 TXNDC2Q86VQ3 553 aa18.13■□□□□ 0.49
CSMD2-202ENST00000338325 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
CSMD2-202ENST00000338325 DAPK1P53355 1430 aa18.11■□□□□ 0.49
CSMD2-202ENST00000338325 RRP7BPQ9NSQ0 103 aa18.11■□□□□ 0.49
CSMD2-202ENST00000338325 EID1Q9Y6B2 187 aa18.11■□□□□ 0.49
CSMD2-202ENST00000338325 KANK1Q14678 1352 aa18.1■□□□□ 0.49
CSMD2-202ENST00000338325 LMTK2Q8IWU2 1503 aa18.1■□□□□ 0.49
CSMD2-202ENST00000338325 EFCAB6Q5THR3 1501 aa18.09■□□□□ 0.49
CSMD2-202ENST00000338325 TMEM2Q9UHN6 1383 aa18.09■□□□□ 0.49
CSMD2-202ENST00000338325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.49
CSMD2-202ENST00000338325 FGD6Q6ZV73 1430 aa18.07■□□□□ 0.48
CSMD2-202ENST00000338325 STAG3Q9UJ98 1225 aa18.05■□□□□ 0.48
CSMD2-202ENST00000338325 ADGRB3O60242 1522 aa18.04■□□□□ 0.48
CSMD2-202ENST00000338325 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
CSMD2-202ENST00000338325 TET3O43151 1660 aa18.04■□□□□ 0.48
CSMD2-202ENST00000338325 APLP2Q06481 763 aa18.03■□□□□ 0.48
CSMD2-202ENST00000338325 FAM135BQ49AJ0 1406 aa18.02■□□□□ 0.48
CSMD2-202ENST00000338325 NWD1Q149M9 1564 aa18.02■□□□□ 0.47
CSMD2-202ENST00000338325 ROBO1Q9Y6N7 1651 aa18.02■□□□□ 0.47
CSMD2-202ENST00000338325 NOS1P29475 1434 aa18.01■□□□□ 0.47
CSMD2-202ENST00000338325 TMEM94Q12767 1356 aa18.01■□□□□ 0.47
CSMD2-202ENST00000338325 IDI1Q13907 227 aa18.01■□□□□ 0.47
CSMD2-202ENST00000338325 CHIC2Q9UKJ5 165 aa18■□□□□ 0.47
CSMD2-202ENST00000338325 NKTRP30414 1462 aaKnown RBP18■□□□□ 0.47
CSMD2-202ENST00000338325 ADGRL2O95490 1459 aa17.99■□□□□ 0.47
CSMD2-202ENST00000338325 MYO5BQ9ULV0 1848 aa17.98■□□□□ 0.47
CSMD2-202ENST00000338325 KCNA6P17658 529 aa17.98■□□□□ 0.47
CSMD2-202ENST00000338325 RGS17Q9UGC6 210 aaPredicted RBP17.97■□□□□ 0.47
CSMD2-202ENST00000338325 GCC2Q8IWJ2 1684 aa17.97■□□□□ 0.47
CSMD2-202ENST00000338325 RPRD2Q5VT52 1461 aaKnown RBP17.96■□□□□ 0.47
CSMD2-202ENST00000338325 SLC26A8Q96RN1 970 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms