RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 MYO5CQ9NQX4 1742 aa15.85■□□□□ 0.13
RBM39-202ENST00000338163 TMC1Q8TDI8 760 aa15.85■□□□□ 0.13
RBM39-202ENST00000338163 PREX2Q70Z35 1606 aa15.85■□□□□ 0.13
RBM39-202ENST00000338163 CDC42BPBQ9Y5S2 1711 aa15.85■□□□□ 0.13
RBM39-202ENST00000338163 DIP2BQ9P265 1576 aa15.85■□□□□ 0.13
RBM39-202ENST00000338163 TCOF1Q13428 1488 aaKnown RBP15.84■□□□□ 0.13
RBM39-202ENST00000338163 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
RBM39-202ENST00000338163 KDM6BO15054 1643 aa15.83■□□□□ 0.12
RBM39-202ENST00000338163 AFAP1Q8N556 730 aa15.81■□□□□ 0.12
RBM39-202ENST00000338163 SAMD9LQ8IVG5 1584 aa15.81■□□□□ 0.12
RBM39-202ENST00000338163 TSPY4P0CV99 314 aa15.81■□□□□ 0.12
RBM39-202ENST00000338163 TSPY10P0CW01 314 aa15.81■□□□□ 0.12
RBM39-202ENST00000338163 GLI2P10070 1586 aa15.8■□□□□ 0.12
RBM39-202ENST00000338163 ABCC5O15440 1437 aa15.8■□□□□ 0.12
RBM39-202ENST00000338163 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.8■□□□□ 0.12
RBM39-202ENST00000338163 SYCP2Q9BX26 1530 aa15.8■□□□□ 0.12
RBM39-202ENST00000338163 DAPK1P53355 1430 aa15.79■□□□□ 0.12
RBM39-202ENST00000338163 SCAPERQ9BY12 1400 aa15.79■□□□□ 0.12
RBM39-202ENST00000338163 RNF123Q5XPI4 1314 aa15.79■□□□□ 0.12
RBM39-202ENST00000338163 EXOC6Q8TAG9 804 aa15.79■□□□□ 0.12
RBM39-202ENST00000338163 ADGRL1O94910 1474 aa15.78■□□□□ 0.12
RBM39-202ENST00000338163 ARHGEF12Q9NZN5 1544 aa15.78■□□□□ 0.12
RBM39-202ENST00000338163 ARAP3Q8WWN8 1544 aa15.78■□□□□ 0.12
RBM39-202ENST00000338163 MBD5Q9P267 1494 aa15.78■□□□□ 0.12
RBM39-202ENST00000338163 TSPOAP1O95153 1857 aa15.77■□□□□ 0.12
RBM39-202ENST00000338163 RAPGEF3O95398 923 aa15.77■□□□□ 0.12
RBM39-202ENST00000338163 MAP3K4Q9Y6R4 1608 aa15.77■□□□□ 0.11
RBM39-202ENST00000338163 ANKRD30BQ9BXX2 1392 aa15.77■□□□□ 0.11
RBM39-202ENST00000338163 KIAA1107Q9UPP5 1409 aa15.77■□□□□ 0.11
RBM39-202ENST00000338163 TRAPPC8Q9Y2L5 1435 aa15.77■□□□□ 0.11
RBM39-202ENST00000338163 PLEKHH2Q8IVE3 1493 aa15.76■□□□□ 0.11
RBM39-202ENST00000338163 SPATA31E1Q6ZUB1 1445 aa15.76■□□□□ 0.11
RBM39-202ENST00000338163 PDE4AP27815 886 aa15.76■□□□□ 0.11
RBM39-202ENST00000338163 PNISRQ8TF01 805 aaKnown RBP15.76■□□□□ 0.11
RBM39-202ENST00000338163 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
RBM39-202ENST00000338163 RPRD2Q5VT52 1461 aaKnown RBP15.76■□□□□ 0.11
RBM39-202ENST00000338163 RSPH4AQ5TD94 716 aa15.75■□□□□ 0.11
RBM39-202ENST00000338163 RRP1P56182 461 aaKnown RBP15.75■□□□□ 0.11
RBM39-202ENST00000338163 USP47Q96K76 1375 aa15.74■□□□□ 0.11
RBM39-202ENST00000338163 KIF13AQ9H1H9 1805 aa15.74■□□□□ 0.11
RBM39-202ENST00000338163 CCDC141Q6ZP82 1450 aa15.74■□□□□ 0.11
RBM39-202ENST00000338163 ABCC1P33527 1531 aa15.74■□□□□ 0.11
RBM39-202ENST00000338163 TEX14Q8IWB6 1497 aa15.74■□□□□ 0.11
RBM39-202ENST00000338163 SPAG9O60271 1321 aaKnown RBP15.73■□□□□ 0.11
RBM39-202ENST00000338163 DNMT1P26358 1616 aaKnown RBP15.73■□□□□ 0.11
RBM39-202ENST00000338163 C9orf84Q5VXU9 1444 aa15.73■□□□□ 0.11
RBM39-202ENST00000338163 TCERG1O14776 1098 aaKnown RBP15.73■□□□□ 0.11
RBM39-202ENST00000338163 GCC2Q8IWJ2 1684 aa15.72■□□□□ 0.11
RBM39-202ENST00000338163 NEO1Q92859 1461 aa15.72■□□□□ 0.11
RBM39-202ENST00000338163 RCAN3Q9UKA8 241 aa15.72■□□□□ 0.11
RBM39-202ENST00000338163 SKAP1Q86WV1 359 aa15.71■□□□□ 0.11
RBM39-202ENST00000338163 ANKRD30AQ9BXX3 1397 aa15.69■□□□□ 0.1
RBM39-202ENST00000338163 BACH2Q9BYV9 841 aa15.69■□□□□ 0.1
RBM39-202ENST00000338163 ARHGEF5Q12774 1597 aa15.69■□□□□ 0.1
RBM39-202ENST00000338163 USP35Q9P2H5 1018 aa15.68■□□□□ 0.1
RBM39-202ENST00000338163 CFAP74Q9C0B2 1584 aa15.68■□□□□ 0.1
RBM39-202ENST00000338163 PPM1GO15355 546 aaPredicted RBP15.68■□□□□ 0.1
RBM39-202ENST00000338163 PPRC1Q5VV67 1664 aaKnown RBP15.67■□□□□ 0.1
RBM39-202ENST00000338163 PLIN1O60240 522 aa15.67■□□□□ 0.1
RBM39-202ENST00000338163 BRPF3Q9ULD4 1205 aa15.67■□□□□ 0.1
RBM39-202ENST00000338163 POGZQ7Z3K3 1410 aa15.67■□□□□ 0.1
RBM39-202ENST00000338163 ZNF518AQ6AHZ1 1483 aa15.66■□□□□ 0.1
RBM39-202ENST00000338163 KIF15Q9NS87 1388 aa15.66■□□□□ 0.1
RBM39-202ENST00000338163 CARD11Q9BXL7 1154 aa15.66■□□□□ 0.1
RBM39-202ENST00000338163 ROCK1Q13464 1354 aa15.66■□□□□ 0.1
RBM39-202ENST00000338163 SLC4A3P48751 1232 aa15.65■□□□□ 0.1
RBM39-202ENST00000338163 KDM2AQ9Y2K7 1162 aa15.65■□□□□ 0.1
RBM39-202ENST00000338163 SHANK2Q9UPX8 1470 aa15.65■□□□□ 0.1
RBM39-202ENST00000338163 DAXXQ9UER7 740 aaPredicted RBP15.64■□□□□ 0.09
RBM39-202ENST00000338163 COL17A1Q9UMD9 1497 aaPredicted RBP15.64■□□□□ 0.09
RBM39-202ENST00000338163 CDCA7LQ96GN5 454 aa15.63■□□□□ 0.09
RBM39-202ENST00000338163 PKD2Q13563 968 aa15.63■□□□□ 0.09
RBM39-202ENST00000338163 MYBBP1AQ9BQG0 1328 aaKnown RBP15.62■□□□□ 0.09
RBM39-202ENST00000338163 CROCC2H7BZ55 1655 aa15.62■□□□□ 0.09
RBM39-202ENST00000338163 EIF5BO60841 1220 aaKnown RBP15.62■□□□□ 0.09
RBM39-202ENST00000338163 ST20-MTHFSA0A0A6YYL1 179 aa15.61■□□□□ 0.09
RBM39-202ENST00000338163 MS4A1P11836 297 aa15.61■□□□□ 0.09
RBM39-202ENST00000338163 ADGRL2O95490 1459 aa15.61■□□□□ 0.09
RBM39-202ENST00000338163 BCORL1Q5H9F3 1711 aa15.61■□□□□ 0.09
RBM39-202ENST00000338163 ANKRD50Q9ULJ7 1429 aa15.6■□□□□ 0.09
RBM39-202ENST00000338163 GSE1Q14687 1217 aa15.6■□□□□ 0.09
RBM39-202ENST00000338163 POLR1AO95602 1720 aaPredicted RBP15.59■□□□□ 0.09
RBM39-202ENST00000338163 DDRGK1Q96HY6 314 aa15.59■□□□□ 0.09
RBM39-202ENST00000338163 RTEL1-TNFRSF6BF6WH68 1400 aa15.59■□□□□ 0.09
RBM39-202ENST00000338163 ATP7AQ04656 1500 aa15.59■□□□□ 0.09
RBM39-202ENST00000338163 ZFYVE16Q7Z3T8 1539 aa15.58■□□□□ 0.09
RBM39-202ENST00000338163 ROCK2O75116 1388 aaKnown RBP15.58■□□□□ 0.08
RBM39-202ENST00000338163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.084e-13■■□□□ 11.5
RBM39-202ENST00000338163 BRD4O60885 1362 aaPredicted RBP15.58■□□□□ 0.08
RBM39-202ENST00000338163 LRPPRCP42704 1394 aaKnown RBP15.58■□□□□ 0.08
RBM39-202ENST00000338163 WASHC2CQ9Y4E1 1318 aa15.58■□□□□ 0.08
RBM39-202ENST00000338163 NFKBIBQ15653 356 aa15.58■□□□□ 0.08
RBM39-202ENST00000338163 CRBNQ96SW2 442 aa15.58■□□□□ 0.08
RBM39-202ENST00000338163 YEATS2Q9ULM3 1422 aa15.57■□□□□ 0.08
RBM39-202ENST00000338163 RALBP1Q15311 655 aa15.57■□□□□ 0.08
RBM39-202ENST00000338163 MAST1Q9Y2H9 1570 aa15.57■□□□□ 0.08
RBM39-202ENST00000338163 ARID4BQ4LE39 1312 aaPredicted RBP15.56■□□□□ 0.08
RBM39-202ENST00000338163 KDM5CP41229 1560 aa15.56■□□□□ 0.08
RBM39-202ENST00000338163 MLH3Q9UHC1 1453 aa15.56■□□□□ 0.08
RBM39-202ENST00000338163 ADGBQ8N7X0 1667 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms