RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 MADDQ8WXG6 1647 aa8.12□□□□□ -1.11
PRPF4B-201ENST00000337659 PPLO60437 1756 aa8.11□□□□□ -1.11
PRPF4B-201ENST00000337659 FANCAO15360 1455 aa8.11□□□□□ -1.11
PRPF4B-201ENST00000337659 KDM4FA0A1W2PPD8 638 aa8.11□□□□□ -1.11
PRPF4B-201ENST00000337659 COL17A1Q9UMD9 1497 aaPredicted RBP8.1□□□□□ -1.11
PRPF4B-201ENST00000337659 ANKRD30AQ9BXX3 1397 aa8.1□□□□□ -1.11
PRPF4B-201ENST00000337659 ARHGAP31Q2M1Z3 1444 aa8.1□□□□□ -1.11
PRPF4B-201ENST00000337659 PLA2R1Q13018 1463 aa8.09□□□□□ -1.11
PRPF4B-201ENST00000337659 ADGRB3O60242 1522 aa8.09□□□□□ -1.11
PRPF4B-201ENST00000337659 SETD1AO15047 1707 aaKnown RBP8.09□□□□□ -1.11
PRPF4B-201ENST00000337659 SPATA31E1Q6ZUB1 1445 aa8.09□□□□□ -1.11
PRPF4B-201ENST00000337659 SETBP1Q9Y6X0 1596 aa8.09□□□□□ -1.11
PRPF4B-201ENST00000337659 UGGT1Q9NYU2 1555 aa8.09□□□□□ -1.11
PRPF4B-201ENST00000337659 CLTCL1P53675 1640 aa8.09□□□□□ -1.11
PRPF4B-201ENST00000337659 ANKRD50Q9ULJ7 1429 aa8.08□□□□□ -1.12
PRPF4B-201ENST00000337659 MYOM2P54296 1465 aa8.08□□□□□ -1.12
PRPF4B-201ENST00000337659 RALGAPBQ86X10 1494 aa8.08□□□□□ -1.12
PRPF4B-201ENST00000337659 FER1L4A9Z1Z3 1794 aa8.08□□□□□ -1.12
PRPF4B-201ENST00000337659 PREX1Q8TCU6 1659 aa8.08□□□□□ -1.12
PRPF4B-201ENST00000337659 TRAPPC8Q9Y2L5 1435 aa8.07□□□□□ -1.12
PRPF4B-201ENST00000337659 TRHP20396 242 aaPredicted RBP8.07□□□□□ -1.12
PRPF4B-201ENST00000337659 SYNMO15061 1565 aa8.06□□□□□ -1.12
PRPF4B-201ENST00000337659 P3H3Q8IVL6 736 aa8.06□□□□□ -1.12
PRPF4B-201ENST00000337659 KIF1BO60333 1816 aa8.05□□□□□ -1.12
PRPF4B-201ENST00000337659 ABCC3O15438 1527 aa8.05□□□□□ -1.12
PRPF4B-201ENST00000337659 GPRASP1Q5JY77 1395 aa8.05□□□□□ -1.12
PRPF4B-201ENST00000337659 PLEKHD1A6NEE1 506 aa8.05□□□□□ -1.12
PRPF4B-201ENST00000337659 ZNF142P52746 1687 aaPredicted RBP8.04□□□□□ -1.12
PRPF4B-201ENST00000337659 SPATA31D1Q6ZQQ2 1576 aa8.04□□□□□ -1.12
PRPF4B-201ENST00000337659 KNDC1Q76NI1 1749 aa8.04□□□□□ -1.12
PRPF4B-201ENST00000337659 CLTCQ00610 1675 aaKnown RBP8.03□□□□□ -1.12
PRPF4B-201ENST00000337659 KIF15Q9NS87 1388 aa8.03□□□□□ -1.12
PRPF4B-201ENST00000337659 PRAG1Q86YV5 1406 aa8.02□□□□□ -1.13
PRPF4B-201ENST00000337659 SCAPERQ9BY12 1400 aa8.02□□□□□ -1.13
PRPF4B-201ENST00000337659 AEBP2Q6ZN18 517 aaPredicted RBP8.02□□□□□ -1.13
PRPF4B-201ENST00000337659 DHX29Q7Z478 1369 aaKnown RBP8.02□□□□□ -1.13
PRPF4B-201ENST00000337659 NOS1P29475 1434 aa8.02□□□□□ -1.13
PRPF4B-201ENST00000337659 USP32Q8NFA0 1604 aa8.01□□□□□ -1.13
PRPF4B-201ENST00000337659 MYOM1P52179 1685 aa8.01□□□□□ -1.13
PRPF4B-201ENST00000337659 TMEM131LA2VDJ0 1609 aa8.01□□□□□ -1.13
PRPF4B-201ENST00000337659 RIMS1Q86UR5 1692 aaKnown RBP8□□□□□ -1.13
PRPF4B-201ENST00000337659 A2MP01023 1474 aa8□□□□□ -1.13
PRPF4B-201ENST00000337659 LMTK3Q96Q04 1460 aa8□□□□□ -1.13
PRPF4B-201ENST00000337659 FBLN2P98095 1184 aa7.99□□□□□ -1.13
PRPF4B-201ENST00000337659 STRCQ7RTU9 1775 aa7.99□□□□□ -1.13
PRPF4B-201ENST00000337659 ZNF644Q9H582 1327 aaPredicted RBP7.99□□□□□ -1.13
PRPF4B-201ENST00000337659 EHMT2Q96KQ7 1210 aa7.99□□□□□ -1.13
PRPF4B-201ENST00000337659 ZFYVE9O95405 1425 aa7.99□□□□□ -1.13
PRPF4B-201ENST00000337659 CD109Q6YHK3 1445 aa7.99□□□□□ -1.13
PRPF4B-201ENST00000337659 CFDP1Q9UEE9 299 aaPredicted RBP7.98□□□□□ -1.13
PRPF4B-201ENST00000337659 CNTLNQ9NXG0 1405 aa7.98□□□□□ -1.13
PRPF4B-201ENST00000337659 PTPRMP28827 1452 aa7.97□□□□□ -1.13
PRPF4B-201ENST00000337659 NEXMIFQ5QGS0 1516 aa7.97□□□□□ -1.13
PRPF4B-201ENST00000337659 FAM69CQ0P6D2 419 aa7.97□□□□□ -1.13
PRPF4B-201ENST00000337659 ADGRB1O14514 1584 aa7.96□□□□□ -1.14
PRPF4B-201ENST00000337659 PPARGC1BQ86YN6 1023 aaKnown RBP7.95□□□□□ -1.14
PRPF4B-201ENST00000337659 STAC3Q96MF2 364 aa7.95□□□□□ -1.14
PRPF4B-201ENST00000337659 USP54Q70EL1 1684 aa7.95□□□□□ -1.14
PRPF4B-201ENST00000337659 PPP1R15AO75807 674 aaPredicted RBP7.95□□□□□ -1.14
PRPF4B-201ENST00000337659 EFCAB2Q5VUJ9 269 aa7.95□□□□□ -1.14
PRPF4B-201ENST00000337659 NRXN3Q9Y4C0 1643 aa7.95□□□□□ -1.14
PRPF4B-201ENST00000337659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.95□□□□□ -1.14
PRPF4B-201ENST00000337659 ARHGEF28Q8N1W1 1705 aaKnown RBP7.95□□□□□ -1.14
PRPF4B-201ENST00000337659 MPHOSPH9Q99550 1183 aa7.94□□□□□ -1.14
PRPF4B-201ENST00000337659 ARID4BQ4LE39 1312 aaPredicted RBP7.94□□□□□ -1.14
PRPF4B-201ENST00000337659 NPM1P06748 294 aaKnown RBP eCLIP7.93□□□□□ -1.14
PRPF4B-201ENST00000337659 MYO5BQ9ULV0 1848 aa7.92□□□□□ -1.14
PRPF4B-201ENST00000337659 UBR1Q8IWV7 1749 aa7.92□□□□□ -1.14
PRPF4B-201ENST00000337659 PPP6R1Q9UPN7 881 aa7.92□□□□□ -1.14
PRPF4B-201ENST00000337659 DLC1Q96QB1 1528 aa7.91□□□□□ -1.14
PRPF4B-201ENST00000337659 ANKRD26Q9UPS8 1709 aa7.91□□□□□ -1.14
PRPF4B-201ENST00000337659 CCER1Q8TC90 406 aaPredicted RBP7.91□□□□□ -1.14
PRPF4B-201ENST00000337659 ADGRB2O60241 1585 aa7.91□□□□□ -1.14
PRPF4B-201ENST00000337659 C3P01024 1663 aa7.91□□□□□ -1.14
PRPF4B-201ENST00000337659 HNRNPUL2Q1KMD3 747 aaKnown RBP7.91□□□□□ -1.14
PRPF4B-201ENST00000337659 INSRP06213 1382 aa7.9□□□□□ -1.15
PRPF4B-201ENST00000337659 SETD1BQ9UPS6 1966 aaKnown RBP7.9□□□□□ -1.15
PRPF4B-201ENST00000337659 FAM50AQ14320 339 aaKnown RBP7.89□□□□□ -1.15
PRPF4B-201ENST00000337659 LTBP4Q8N2S1 1624 aa7.89□□□□□ -1.15
PRPF4B-201ENST00000337659 NUP155O75694 1391 aa7.89□□□□□ -1.15
PRPF4B-201ENST00000337659 SBNO2Q9Y2G9 1366 aa7.89□□□□□ -1.15
PRPF4B-201ENST00000337659 NPATQ14207 1427 aa7.89□□□□□ -1.15
PRPF4B-201ENST00000337659 ASXL1Q8IXJ9 1541 aa7.89□□□□□ -1.15
PRPF4B-201ENST00000337659 DIP2AQ14689 1571 aa7.89□□□□□ -1.15
PRPF4B-201ENST00000337659 PIK3C2GO75747 1445 aa7.88□□□□□ -1.15
PRPF4B-201ENST00000337659 TOPAZ1Q8N9V7 1692 aa7.88□□□□□ -1.15
PRPF4B-201ENST00000337659 ZNF316A6NFI3 1004 aaPredicted RBP7.88□□□□□ -1.15
PRPF4B-201ENST00000337659 FBXO41Q8TF61 875 aa7.88□□□□□ -1.15
PRPF4B-201ENST00000337659 ERVK-7P63135 1459 aa7.88□□□□□ -1.15
PRPF4B-201ENST00000337659 RANGAP1P46060 587 aaPredicted RBP7.87□□□□□ -1.15
PRPF4B-201ENST00000337659 QRICH2Q9H0J4 1663 aa7.87□□□□□ -1.15
PRPF4B-201ENST00000337659 SLIT1O75093 1534 aa7.86□□□□□ -1.15
PRPF4B-201ENST00000337659 CPS1P31327 1500 aa7.86□□□□□ -1.15
PRPF4B-201ENST00000337659 ILDR1Q86SU0 546 aaPredicted RBP7.85□□□□□ -1.15
PRPF4B-201ENST00000337659 LRRC7Q96NW7 1537 aa7.85□□□□□ -1.15
PRPF4B-201ENST00000337659 HNRNPMP52272 730 aaKnown RBP eCLIP7.84□□□□□ -1.15
PRPF4B-201ENST00000337659 ARHGAP23Q9P227 1491 aa7.84□□□□□ -1.15
PRPF4B-201ENST00000337659 MED14O60244 1454 aa7.84□□□□□ -1.16
PRPF4B-201ENST00000337659 XRN1Q8IZH2 1706 aaKnown RBP7.84□□□□□ -1.16
PRPF4B-201ENST00000337659 YEATS2Q9ULM3 1422 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms