RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 KDM5CP41229 1560 aa23.2■■□□□ 1.31
TMEM39B-201ENST00000336294 FANCAO15360 1455 aa23.2■■□□□ 1.3
TMEM39B-201ENST00000336294 ZFYVE16Q7Z3T8 1539 aa23.19■■□□□ 1.3
TMEM39B-201ENST00000336294 ASXL2Q76L83 1435 aa23.19■■□□□ 1.3
TMEM39B-201ENST00000336294 KIF7Q2M1P5 1343 aa23.19■■□□□ 1.3
TMEM39B-201ENST00000336294 PLA2R1Q13018 1463 aa23.16■■□□□ 1.3
TMEM39B-201ENST00000336294 DCAF11Q8TEB1 546 aa23.15■■□□□ 1.3
TMEM39B-201ENST00000336294 ATP10AO60312 1499 aa23.15■■□□□ 1.3
TMEM39B-201ENST00000336294 AFAP1Q8N556 730 aa23.13■■□□□ 1.29
TMEM39B-201ENST00000336294 INO80Q9ULG1 1556 aaPredicted RBP23.13■■□□□ 1.29
TMEM39B-201ENST00000336294 KDM2AQ9Y2K7 1162 aa23.12■■□□□ 1.29
TMEM39B-201ENST00000336294 ARID4BQ4LE39 1312 aaPredicted RBP23.12■■□□□ 1.29
TMEM39B-201ENST00000336294 ATP7AQ04656 1500 aa23.12■■□□□ 1.29
TMEM39B-201ENST00000336294 BCORL1Q5H9F3 1711 aa23.11■■□□□ 1.29
TMEM39B-201ENST00000336294 ADGRL1O94910 1474 aa23.11■■□□□ 1.29
TMEM39B-201ENST00000336294 CARD11Q9BXL7 1154 aa23.11■■□□□ 1.29
TMEM39B-201ENST00000336294 NPM1P06748 294 aaKnown RBP eCLIP23.1■■□□□ 1.29
TMEM39B-201ENST00000336294 PRAG1Q86YV5 1406 aa23.08■■□□□ 1.29
TMEM39B-201ENST00000336294 SCAPERQ9BY12 1400 aa23.08■■□□□ 1.29
TMEM39B-201ENST00000336294 DEPDC5O75140 1603 aa23.08■■□□□ 1.28
TMEM39B-201ENST00000336294 TRPM1Q7Z4N2 1603 aa23.07■■□□□ 1.28
TMEM39B-201ENST00000336294 A2MP01023 1474 aa23.06■■□□□ 1.28
TMEM39B-201ENST00000336294 ROCK2O75116 1388 aaKnown RBP23.06■■□□□ 1.28
TMEM39B-201ENST00000336294 PRKRIP1Q9H875 184 aaPredicted RBP23.05■■□□□ 1.28
TMEM39B-201ENST00000336294 E9PCH4 1651 aa23.03■■□□□ 1.28
TMEM39B-201ENST00000336294 EIF2AK4Q9P2K8 1649 aaKnown RBP23.03■■□□□ 1.28
TMEM39B-201ENST00000336294 RGL3Q3MIN7 710 aa23.02■■□□□ 1.28
TMEM39B-201ENST00000336294 CFAP74Q9C0B2 1584 aa23.02■■□□□ 1.28
TMEM39B-201ENST00000336294 KANK1Q14678 1352 aa23■■□□□ 1.27
TMEM39B-201ENST00000336294 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
TMEM39B-201ENST00000336294 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
TMEM39B-201ENST00000336294 LAMC1P11047 1609 aa23■■□□□ 1.27
TMEM39B-201ENST00000336294 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
TMEM39B-201ENST00000336294 TET3O43151 1660 aa23■■□□□ 1.27
TMEM39B-201ENST00000336294 TRPM2O94759 1503 aa22.99■■□□□ 1.27
TMEM39B-201ENST00000336294 VWDEQ8N2E2 1590 aa22.99■■□□□ 1.27
TMEM39B-201ENST00000336294 MYT1LQ9UL68 1186 aa22.98■■□□□ 1.27
TMEM39B-201ENST00000336294 DHX29Q7Z478 1369 aaKnown RBP22.98■■□□□ 1.27
TMEM39B-201ENST00000336294 ZNF518AQ6AHZ1 1483 aa22.98■■□□□ 1.27
TMEM39B-201ENST00000336294 GPRASP1Q5JY77 1395 aa22.98■■□□□ 1.27
TMEM39B-201ENST00000336294 SUPT16HQ9Y5B9 1047 aaKnown RBP22.98■■□□□ 1.27
TMEM39B-201ENST00000336294 ST20-MTHFSA0A0A6YYL1 179 aa22.97■■□□□ 1.27
TMEM39B-201ENST00000336294 SPHKAPQ2M3C7 1700 aa22.97■■□□□ 1.27
TMEM39B-201ENST00000336294 POLR3GLQ9BT43 218 aa22.96■■□□□ 1.27
TMEM39B-201ENST00000336294 PRDM15P57071 1507 aaPredicted RBP22.96■■□□□ 1.27
TMEM39B-201ENST00000336294 PTPRTO14522 1441 aa22.95■■□□□ 1.26
TMEM39B-201ENST00000336294 CD109Q6YHK3 1445 aa22.95■■□□□ 1.26
TMEM39B-201ENST00000336294 KIDINS220Q9ULH0 1771 aa22.94■■□□□ 1.26
TMEM39B-201ENST00000336294 KIF3BO15066 747 aa22.93■■□□□ 1.26
TMEM39B-201ENST00000336294 CEP152O94986 1710 aa22.93■■□□□ 1.26
TMEM39B-201ENST00000336294 HNRNPUQ00839 825 aaKnown RBP eCLIP22.92■■□□□ 1.26
TMEM39B-201ENST00000336294 MROH1Q8NDA8 1641 aa22.91■■□□□ 1.26
TMEM39B-201ENST00000336294 MRS2Q9HD23 443 aa22.91■■□□□ 1.26
TMEM39B-201ENST00000336294 CCDC184Q52MB2 194 aa22.9■■□□□ 1.26
TMEM39B-201ENST00000336294 NBPF1Q3BBV0 1214 aa22.89■■□□□ 1.26
TMEM39B-201ENST00000336294 CLTCL1P53675 1640 aa22.89■■□□□ 1.26
TMEM39B-201ENST00000336294 POGZQ7Z3K3 1410 aa22.89■■□□□ 1.25
TMEM39B-201ENST00000336294 RNF17Q9BXT8 1623 aaKnown RBP22.88■■□□□ 1.25
TMEM39B-201ENST00000336294 CYB5RLQ6IPT4 315 aa22.87■■□□□ 1.25
TMEM39B-201ENST00000336294 STAC3Q96MF2 364 aa22.87■■□□□ 1.25
TMEM39B-201ENST00000336294 MADDQ8WXG6 1647 aa22.85■■□□□ 1.25
TMEM39B-201ENST00000336294 MLH3Q9UHC1 1453 aa22.85■■□□□ 1.25
TMEM39B-201ENST00000336294 NEURL4Q96JN8 1562 aa22.85■■□□□ 1.25
TMEM39B-201ENST00000336294 HECW2Q9P2P5 1572 aa22.84■■□□□ 1.25
TMEM39B-201ENST00000336294 EFCAB6Q5THR3 1501 aa22.83■■□□□ 1.25
TMEM39B-201ENST00000336294 NEO1Q92859 1461 aa22.83■■□□□ 1.24
TMEM39B-201ENST00000336294 LMTK2Q8IWU2 1503 aa22.83■■□□□ 1.24
TMEM39B-201ENST00000336294 COL17A1Q9UMD9 1497 aaPredicted RBP22.82■■□□□ 1.24
TMEM39B-201ENST00000336294 FAM9BQ8IZU0 186 aa22.81■■□□□ 1.24
TMEM39B-201ENST00000336294 NEFLP07196 543 aa22.8■■□□□ 1.24
TMEM39B-201ENST00000336294 KTN1Q86UP2 1357 aaKnown RBP22.8■■□□□ 1.24
TMEM39B-201ENST00000336294 PPRC1Q5VV67 1664 aaKnown RBP22.78■■□□□ 1.24
TMEM39B-201ENST00000336294 FRMPD1Q5SYB0 1578 aa22.78■■□□□ 1.24
TMEM39B-201ENST00000336294 TESK2Q96S53 571 aa22.77■■□□□ 1.24
TMEM39B-201ENST00000336294 FKBP8Q14318 412 aa22.76■■□□□ 1.23
TMEM39B-201ENST00000336294 IQGAP1P46940 1657 aa22.75■■□□□ 1.23
TMEM39B-201ENST00000336294 ABCA6Q8N139 1617 aa22.75■■□□□ 1.23
TMEM39B-201ENST00000336294 KIF1BO60333 1816 aa22.74■■□□□ 1.23
TMEM39B-201ENST00000336294 TMF1P82094 1093 aa22.73■■□□□ 1.23
TMEM39B-201ENST00000336294 DISP3Q9P2K9 1392 aa22.73■■□□□ 1.23
TMEM39B-201ENST00000336294 KIAA1210Q9ULL0 1709 aa22.73■■□□□ 1.23
TMEM39B-201ENST00000336294 ZBED9Q6R2W3 1325 aa22.73■■□□□ 1.23
TMEM39B-201ENST00000336294 RALBP1Q15311 655 aa22.73■■□□□ 1.23
TMEM39B-201ENST00000336294 MAP3K4Q9Y6R4 1608 aa22.72■■□□□ 1.23
TMEM39B-201ENST00000336294 MYT1Q01538 1121 aa22.72■■□□□ 1.23
TMEM39B-201ENST00000336294 CNGB1Q14028 1251 aaPredicted RBP22.72■■□□□ 1.23
TMEM39B-201ENST00000336294 MYOM2P54296 1465 aa22.71■■□□□ 1.23
TMEM39B-201ENST00000336294 UGGT1Q9NYU2 1555 aa22.71■■□□□ 1.23
TMEM39B-201ENST00000336294 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
TMEM39B-201ENST00000336294 MYBBP1AQ9BQG0 1328 aaKnown RBP22.69■■□□□ 1.22
TMEM39B-201ENST00000336294 GLI2P10070 1586 aa22.68■■□□□ 1.22
TMEM39B-201ENST00000336294 BRD4O60885 1362 aaPredicted RBP22.67■■□□□ 1.22
TMEM39B-201ENST00000336294 IFT172Q9UG01 1749 aa22.66■■□□□ 1.22
TMEM39B-201ENST00000336294 TMC1Q8TDI8 760 aa22.66■■□□□ 1.22
TMEM39B-201ENST00000336294 RICTORQ6R327 1708 aa22.66■■□□□ 1.22
TMEM39B-201ENST00000336294 DIP2CQ9Y2E4 1556 aa22.66■■□□□ 1.22
TMEM39B-201ENST00000336294 RAPGEF3O95398 923 aa22.65■■□□□ 1.22
TMEM39B-201ENST00000336294 GGT6Q6P531 493 aa22.65■■□□□ 1.22
TMEM39B-201ENST00000336294 MROH2AA6NES4 1674 aa22.65■■□□□ 1.22
TMEM39B-201ENST00000336294 WASHC2CQ9Y4E1 1318 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms