RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 SENP3-EIF4A1A0A087X0R7 540 aa21.63■■□□□ 1.05
UPK3B-202ENST00000334348 RCAN3Q9UKA8 241 aa21.63■■□□□ 1.05
UPK3B-202ENST00000334348 KIF14Q15058 1648 aa21.62■■□□□ 1.05
UPK3B-202ENST00000334348 MYBBP1AQ9BQG0 1328 aaKnown RBP21.6■■□□□ 1.05
UPK3B-202ENST00000334348 RALBP1Q15311 655 aa21.6■■□□□ 1.05
UPK3B-202ENST00000334348 PDE3BQ13370 1112 aa21.59■■□□□ 1.05
UPK3B-202ENST00000334348 KIAA1107Q9UPP5 1409 aa21.59■■□□□ 1.05
UPK3B-202ENST00000334348 RAPGEF6Q8TEU7 1601 aa21.58■■□□□ 1.04
UPK3B-202ENST00000334348 ADCY10Q96PN6 1610 aa21.57■■□□□ 1.04
UPK3B-202ENST00000334348 UHRF1BP1Q6BDS2 1440 aa21.57■■□□□ 1.04
UPK3B-202ENST00000334348 RTN4Q9NQC3 1192 aaKnown RBP21.57■■□□□ 1.04
UPK3B-202ENST00000334348 ABCA8O94911 1581 aa21.57■■□□□ 1.04
UPK3B-202ENST00000334348 NUP153P49790 1475 aaKnown RBP21.56■■□□□ 1.04
UPK3B-202ENST00000334348 ZNF326Q5BKZ1 582 aaKnown RBP21.56■■□□□ 1.04
UPK3B-202ENST00000334348 DDRGK1Q96HY6 314 aa21.55■■□□□ 1.04
UPK3B-202ENST00000334348 ZNF644Q9H582 1327 aaPredicted RBP21.55■■□□□ 1.04
UPK3B-202ENST00000334348 RALGAPBQ86X10 1494 aa21.55■■□□□ 1.04
UPK3B-202ENST00000334348 ABCC2Q92887 1545 aa21.52■■□□□ 1.04
UPK3B-202ENST00000334348 CARD11Q9BXL7 1154 aa21.5■■□□□ 1.03
UPK3B-202ENST00000334348 ATP10BO94823 1461 aa21.49■■□□□ 1.03
UPK3B-202ENST00000334348 PKD2Q13563 968 aa21.48■■□□□ 1.03
UPK3B-202ENST00000334348 GSE1Q14687 1217 aa21.47■■□□□ 1.03
UPK3B-202ENST00000334348 NLRP13Q86W25 1043 aa21.47■■□□□ 1.03
UPK3B-202ENST00000334348 UHRF1BP1LA0JNW5 1464 aa21.45■■□□□ 1.02
UPK3B-202ENST00000334348 ARHGEF12Q9NZN5 1544 aa21.45■■□□□ 1.02
UPK3B-202ENST00000334348 ST20-MTHFSA0A0A6YYL1 179 aa21.44■■□□□ 1.02
UPK3B-202ENST00000334348 ADGRL2O95490 1459 aa21.44■■□□□ 1.02
UPK3B-202ENST00000334348 E9PCH4 1651 aa21.44■■□□□ 1.02
UPK3B-202ENST00000334348 PARD3Q8TEW0 1356 aa21.44■■□□□ 1.02
UPK3B-202ENST00000334348 NPM1P06748 294 aaKnown RBP eCLIP21.43■■□□□ 1.02
UPK3B-202ENST00000334348 INSRP06213 1382 aa21.42■■□□□ 1.02
UPK3B-202ENST00000334348 NFKBIBQ15653 356 aa21.42■■□□□ 1.02
UPK3B-202ENST00000334348 ZCCHC11Q5TAX3 1644 aaKnown RBP21.42■■□□□ 1.02
UPK3B-202ENST00000334348 CDCA7LQ96GN5 454 aa21.41■■□□□ 1.02
UPK3B-202ENST00000334348 ADGBQ8N7X0 1667 aa21.41■■□□□ 1.02
UPK3B-202ENST00000334348 CAMSAP2Q08AD1 1489 aa21.41■■□□□ 1.02
UPK3B-202ENST00000334348 BRPF3Q9ULD4 1205 aa21.4■■□□□ 1.02
UPK3B-202ENST00000334348 CRBNQ96SW2 442 aa21.39■■□□□ 1.02
UPK3B-202ENST00000334348 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.38■■□□□ 1.01
UPK3B-202ENST00000334348 PLIN1O60240 522 aa21.38■■□□□ 1.01
UPK3B-202ENST00000334348 ZMYM4Q5VZL5 1548 aa21.37■■□□□ 1.01
UPK3B-202ENST00000334348 CFDP1Q9UEE9 299 aaPredicted RBP21.37■■□□□ 1.01
UPK3B-202ENST00000334348 ANKRD30AQ9BXX3 1397 aa21.37■■□□□ 1.01
UPK3B-202ENST00000334348 BLMP54132 1417 aaPredicted RBP21.35■■□□□ 1.01
UPK3B-202ENST00000334348 ASXL2Q76L83 1435 aa21.35■■□□□ 1.01
UPK3B-202ENST00000334348 ANKRD50Q9ULJ7 1429 aa21.34■■□□□ 1.01
UPK3B-202ENST00000334348 SKAP1Q86WV1 359 aa21.34■■□□□ 1.01
UPK3B-202ENST00000334348 KDM2BQ8NHM5 1336 aa21.33■■□□□ 1.01
UPK3B-202ENST00000334348 FRAT1Q92837 279 aaPredicted RBP21.33■■□□□ 1.01
UPK3B-202ENST00000334348 PLEKHD1A6NEE1 506 aa21.33■■□□□ 1
UPK3B-202ENST00000334348 DAXXQ9UER7 740 aaPredicted RBP21.33■■□□□ 1
UPK3B-202ENST00000334348 PER1O15534 1290 aaPredicted RBP21.32■■□□□ 1
UPK3B-202ENST00000334348 TROQ12816 1431 aaPredicted RBP21.32■■□□□ 1
UPK3B-202ENST00000334348 KDM2AQ9Y2K7 1162 aa21.31■■□□□ 1
UPK3B-202ENST00000334348 GPATCH8Q9UKJ3 1502 aaKnown RBP21.31■■□□□ 1
UPK3B-202ENST00000334348 PLEKHH2Q8IVE3 1493 aa21.31■■□□□ 1
UPK3B-202ENST00000334348 CROCC2H7BZ55 1655 aa21.31■■□□□ 1
UPK3B-202ENST00000334348 ITSN2Q9NZM3 1697 aa21.3■■□□□ 1
UPK3B-202ENST00000334348 NUP155O75694 1391 aa21.3■■□□□ 1
UPK3B-202ENST00000334348 CENPQQ7L2Z9 268 aaPredicted RBP21.3■■□□□ 1
UPK3B-202ENST00000334348 SLC4A3P48751 1232 aa21.29■■□□□ 1
UPK3B-202ENST00000334348 DCAF11Q8TEB1 546 aa21.29■■□□□ 1
UPK3B-202ENST00000334348 FAM161AQ3B820 660 aa21.28■■□□□ 1
UPK3B-202ENST00000334348 KDM5DQ9BY66 1539 aa21.27■□□□□ 0.99
UPK3B-202ENST00000334348 UBE2Q2Q8WVN8 375 aa21.26■□□□□ 0.99
UPK3B-202ENST00000334348 C20orf194Q5TEA3 1177 aa21.25■□□□□ 0.99
UPK3B-202ENST00000334348 WDR7Q9Y4E6 1490 aa21.25■□□□□ 0.99
UPK3B-202ENST00000334348 C8orf34Q49A92 452 aa21.25■□□□□ 0.99
UPK3B-202ENST00000334348 ZNF777Q9ULD5 760 aaPredicted RBP21.25■□□□□ 0.99
UPK3B-202ENST00000334348 FAM69CQ0P6D2 419 aa21.22■□□□□ 0.99
UPK3B-202ENST00000334348 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
UPK3B-202ENST00000334348 SHANK2Q9UPX8 1470 aa21.2■□□□□ 0.98
UPK3B-202ENST00000334348 PRAG1Q86YV5 1406 aa21.19■□□□□ 0.98
UPK3B-202ENST00000334348 CC2D1BQ5T0F9 858 aaKnown RBP21.19■□□□□ 0.98
UPK3B-202ENST00000334348 COL17A1Q9UMD9 1497 aaPredicted RBP21.18■□□□□ 0.98
UPK3B-202ENST00000334348 FRAT2O75474 233 aaPredicted RBP21.18■□□□□ 0.98
UPK3B-202ENST00000334348 FAM43AQ8N2R8 423 aa21.18■□□□□ 0.98
UPK3B-202ENST00000334348 GPRASP1Q5JY77 1395 aa21.17■□□□□ 0.98
UPK3B-202ENST00000334348 TRPM1Q7Z4N2 1603 aa21.17■□□□□ 0.98
UPK3B-202ENST00000334348 C9orf84Q5VXU9 1444 aa21.17■□□□□ 0.98
UPK3B-202ENST00000334348 DUSP27Q5VZP5 1158 aa21.15■□□□□ 0.98
UPK3B-202ENST00000334348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.14■□□□□ 0.98
UPK3B-202ENST00000334348 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.14■□□□□ 0.97
UPK3B-202ENST00000334348 RSPH6AQ9H0K4 717 aa21.14■□□□□ 0.97
UPK3B-202ENST00000334348 PANK3Q9H999 370 aa21.14■□□□□ 0.97
UPK3B-202ENST00000334348 TTC37Q6PGP7 1564 aa21.14■□□□□ 0.97
UPK3B-202ENST00000334348 ABCC10Q5T3U5 1492 aa21.14■□□□□ 0.97
UPK3B-202ENST00000334348 TESK2Q96S53 571 aa21.13■□□□□ 0.97
UPK3B-202ENST00000334348 ADAMTS8Q9UP79 889 aa21.13■□□□□ 0.97
UPK3B-202ENST00000334348 DISP3Q9P2K9 1392 aa21.12■□□□□ 0.97
UPK3B-202ENST00000334348 DIP2BQ9P265 1576 aa21.12■□□□□ 0.97
UPK3B-202ENST00000334348 NBPF1Q3BBV0 1214 aa21.12■□□□□ 0.97
UPK3B-202ENST00000334348 EIF5BO60841 1220 aaKnown RBP21.11■□□□□ 0.97
UPK3B-202ENST00000334348 ZNF521Q96K83 1311 aa21.1■□□□□ 0.97
UPK3B-202ENST00000334348 PLEKHH1Q9ULM0 1364 aa21.1■□□□□ 0.97
UPK3B-202ENST00000334348 KIF13AQ9H1H9 1805 aa21.1■□□□□ 0.97
UPK3B-202ENST00000334348 LAMC1P11047 1609 aa21.1■□□□□ 0.97
UPK3B-202ENST00000334348 TSPY4P0CV99 314 aa21.1■□□□□ 0.97
UPK3B-202ENST00000334348 TSPY10P0CW01 314 aa21.1■□□□□ 0.97
UPK3B-202ENST00000334348 CDC42BPAQ5VT25 1732 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms