RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 ESF1Q9H501 851 aaKnown RBP12.27□□□□□ -0.45
COPB2-201ENST00000333188 RPRD2Q5VT52 1461 aaKnown RBP12.27□□□□□ -0.45
COPB2-201ENST00000333188 DNMT1P26358 1616 aaKnown RBP12.26□□□□□ -0.45
COPB2-201ENST00000333188 KANK1Q14678 1352 aa12.26□□□□□ -0.45
COPB2-201ENST00000333188 CCER2I3L3R5 266 aa12.25□□□□□ -0.45
COPB2-201ENST00000333188 PANK3Q9H999 370 aa12.25□□□□□ -0.45
COPB2-201ENST00000333188 MBD5Q9P267 1494 aa12.25□□□□□ -0.45
COPB2-201ENST00000333188 ABCC2Q92887 1545 aa12.25□□□□□ -0.45
COPB2-201ENST00000333188 PLCH2O75038 1416 aa12.24□□□□□ -0.45
COPB2-201ENST00000333188 FANCAO15360 1455 aa12.24□□□□□ -0.45
COPB2-201ENST00000333188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.24□□□□□ -0.45
COPB2-201ENST00000333188 TTC37Q6PGP7 1564 aa12.24□□□□□ -0.45
COPB2-201ENST00000333188 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
COPB2-201ENST00000333188 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
COPB2-201ENST00000333188 CD109Q6YHK3 1445 aa12.23□□□□□ -0.45
COPB2-201ENST00000333188 ARHGEF12Q9NZN5 1544 aa12.23□□□□□ -0.45
COPB2-201ENST00000333188 ADGRL1O94910 1474 aa12.22□□□□□ -0.45
COPB2-201ENST00000333188 TMF1P82094 1093 aa12.21□□□□□ -0.45
COPB2-201ENST00000333188 KNSTRNQ9Y448 316 aa12.21□□□□□ -0.46
COPB2-201ENST00000333188 FBXO31Q5XUX0 539 aaPredicted RBP12.2□□□□□ -0.46
COPB2-201ENST00000333188 NEUROD2Q15784 382 aa12.19□□□□□ -0.46
COPB2-201ENST00000333188 SAMD9LQ8IVG5 1584 aa12.19□□□□□ -0.46
COPB2-201ENST00000333188 ITSN2Q9NZM3 1697 aa12.18□□□□□ -0.46
COPB2-201ENST00000333188 NUTM2FA1L443 756 aa12.18□□□□□ -0.46
COPB2-201ENST00000333188 ADGRF5Q8IZF2 1346 aa12.18□□□□□ -0.46
COPB2-201ENST00000333188 WDR7Q9Y4E6 1490 aa12.18□□□□□ -0.46
COPB2-201ENST00000333188 CDC42BPAQ5VT25 1732 aa12.18□□□□□ -0.46
COPB2-201ENST00000333188 CFAP65Q6ZU64 1925 aaKnown RBP12.18□□□□□ -0.46
COPB2-201ENST00000333188 CNTLNQ9NXG0 1405 aa12.17□□□□□ -0.46
COPB2-201ENST00000333188 FAM135AQ9P2D6 1515 aa12.16□□□□□ -0.46
COPB2-201ENST00000333188 TEX14Q8IWB6 1497 aa12.15□□□□□ -0.46
COPB2-201ENST00000333188 B4GALNT3Q6L9W6 998 aa12.15□□□□□ -0.46
COPB2-201ENST00000333188 PPM1GO15355 546 aaPredicted RBP12.15□□□□□ -0.47
COPB2-201ENST00000333188 CCDC146Q8IYE0 955 aa12.14□□□□□ -0.47
COPB2-201ENST00000333188 GCC2Q8IWJ2 1684 aa12.14□□□□□ -0.47
COPB2-201ENST00000333188 POGKQ9P215 609 aa12.13□□□□□ -0.47
COPB2-201ENST00000333188 SRPK2P78362 688 aaKnown RBP12.13□□□□□ -0.47
COPB2-201ENST00000333188 ADGRL2O95490 1459 aa12.12□□□□□ -0.47
COPB2-201ENST00000333188 ZCCHC11Q5TAX3 1644 aaKnown RBP12.12□□□□□ -0.47
COPB2-201ENST00000333188 WDR43Q15061 677 aaKnown RBP eCLIP12.12□□□□□ -0.47
COPB2-201ENST00000333188 KDM5BQ9UGL1 1544 aa12.11□□□□□ -0.47
COPB2-201ENST00000333188 SOX12O15370 315 aa12.11□□□□□ -0.47
COPB2-201ENST00000333188 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
COPB2-201ENST00000333188 IDI1Q13907 227 aa12.11□□□□□ -0.47
COPB2-201ENST00000333188 DISP3Q9P2K9 1392 aa12.11□□□□□ -0.47
COPB2-201ENST00000333188 SLC12A5Q9H2X9 1139 aa12.1□□□□□ -0.47
COPB2-201ENST00000333188 CDC42BPBQ9Y5S2 1711 aa12.1□□□□□ -0.47
COPB2-201ENST00000333188 BCL11AQ9H165 835 aa12.1□□□□□ -0.47
COPB2-201ENST00000333188 CABP2Q9NPB3 220 aa12.09□□□□□ -0.47
COPB2-201ENST00000333188 DHX29Q7Z478 1369 aaKnown RBP12.09□□□□□ -0.47
COPB2-201ENST00000333188 CEBPAP49715 358 aaPredicted RBP12.09□□□□□ -0.47
COPB2-201ENST00000333188 PLA2R1Q13018 1463 aa12.09□□□□□ -0.47
COPB2-201ENST00000333188 KTN1Q86UP2 1357 aaKnown RBP12.09□□□□□ -0.47
COPB2-201ENST00000333188 ERBINQ96RT1 1412 aa12.08□□□□□ -0.48
COPB2-201ENST00000333188 CDCA7LQ96GN5 454 aa12.07□□□□□ -0.48
COPB2-201ENST00000333188 TESK2Q96S53 571 aa12.07□□□□□ -0.48
COPB2-201ENST00000333188 SHANK2Q9UPX8 1470 aa12.07□□□□□ -0.48
COPB2-201ENST00000333188 CLASP1Q7Z460 1538 aa12.07□□□□□ -0.48
COPB2-201ENST00000333188 UGGT1Q9NYU2 1555 aa12.06□□□□□ -0.48
COPB2-201ENST00000333188 RRP7AQ9Y3A4 280 aaKnown RBP12.06□□□□□ -0.48
COPB2-201ENST00000333188 ADCY10Q96PN6 1610 aa12.06□□□□□ -0.48
COPB2-201ENST00000333188 PLIN1O60240 522 aa12.05□□□□□ -0.48
COPB2-201ENST00000333188 A2MP01023 1474 aa12.05□□□□□ -0.48
COPB2-201ENST00000333188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.05□□□□□ -0.484e-8■■■■■ 31.2
COPB2-201ENST00000333188 PREX2Q70Z35 1606 aa12.05□□□□□ -0.48
COPB2-201ENST00000333188 NLRP13Q86W25 1043 aa12.04□□□□□ -0.48
COPB2-201ENST00000333188 PRAG1Q86YV5 1406 aa12.04□□□□□ -0.48
COPB2-201ENST00000333188 DUOX2Q9NRD8 1548 aa12.04□□□□□ -0.48
COPB2-201ENST00000333188 MYBBP1AQ9BQG0 1328 aaKnown RBP12.04□□□□□ -0.48
COPB2-201ENST00000333188 PNISRQ8TF01 805 aaKnown RBP12.04□□□□□ -0.48
COPB2-201ENST00000333188 SPATA31E1Q6ZUB1 1445 aa12.04□□□□□ -0.48
COPB2-201ENST00000333188 CDCA8Q53HL2 280 aa12.03□□□□□ -0.48
COPB2-201ENST00000333188 MORC1Q86VD1 984 aa12.03□□□□□ -0.48
COPB2-201ENST00000333188 MYO5CQ9NQX4 1742 aa12.03□□□□□ -0.48
COPB2-201ENST00000333188 RALBP1Q15311 655 aa12.03□□□□□ -0.48
COPB2-201ENST00000333188 ADAMTS8Q9UP79 889 aa12.03□□□□□ -0.48
COPB2-201ENST00000333188 FBLN1P23142 703 aa12.02□□□□□ -0.48
COPB2-201ENST00000333188 YEATS2Q9ULM3 1422 aa12.02□□□□□ -0.48
COPB2-201ENST00000333188 U2SURPO15042 1029 aaKnown RBP12.02□□□□□ -0.49
COPB2-201ENST00000333188 NOS1P29475 1434 aa12.02□□□□□ -0.49
COPB2-201ENST00000333188 WAPLQ7Z5K2 1190 aa12.02□□□□□ -0.49
COPB2-201ENST00000333188 CENPJQ9HC77 1338 aaPredicted RBP12.01□□□□□ -0.49
COPB2-201ENST00000333188 VGFO15240 615 aaPredicted RBP12.01□□□□□ -0.49
COPB2-201ENST00000333188 CCDC136Q96JN2 1154 aa12.01□□□□□ -0.49
COPB2-201ENST00000333188 ADGBQ8N7X0 1667 aa12.01□□□□□ -0.49
COPB2-201ENST00000333188 RBM33Q96EV2 1170 aaKnown RBP12.01□□□□□ -0.49
COPB2-201ENST00000333188 SHROOM2Q13796 1616 aa12□□□□□ -0.49
COPB2-201ENST00000333188 UHRF1BP1LA0JNW5 1464 aa12□□□□□ -0.49
COPB2-201ENST00000333188 PRAM1Q96QH2 718 aa12□□□□□ -0.49
COPB2-201ENST00000333188 GGNBP2Q9H3C7 697 aa12□□□□□ -0.49
COPB2-201ENST00000333188 ARHGEF5Q12774 1597 aa11.99□□□□□ -0.49
COPB2-201ENST00000333188 ABCC1P33527 1531 aa11.99□□□□□ -0.49
COPB2-201ENST00000333188 ATP7AQ04656 1500 aa11.99□□□□□ -0.49
COPB2-201ENST00000333188 TXNDC2Q86VQ3 553 aa11.99□□□□□ -0.49
COPB2-201ENST00000333188 SLC26A8Q96RN1 970 aa11.98□□□□□ -0.49
COPB2-201ENST00000333188 APAF1O14727 1248 aa11.98□□□□□ -0.49
COPB2-201ENST00000333188 ZNF518AQ6AHZ1 1483 aa11.98□□□□□ -0.49
COPB2-201ENST00000333188 RALGAPBQ86X10 1494 aa11.97□□□□□ -0.49
COPB2-201ENST00000333188 ZBTB7CA1YPR0 619 aa11.97□□□□□ -0.49
COPB2-201ENST00000333188 ZBED9Q6R2W3 1325 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms