RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 ZFYVE16Q7Z3T8 1539 aa12.79□□□□□ -0.36
SIMC1-201ENST00000332772 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
SIMC1-201ENST00000332772 UHRF1BP1Q6BDS2 1440 aa12.78□□□□□ -0.36
SIMC1-201ENST00000332772 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.36
SIMC1-201ENST00000332772 DEPDC5O75140 1603 aa12.77□□□□□ -0.37
SIMC1-201ENST00000332772 SPAG9O60271 1321 aaKnown RBP12.77□□□□□ -0.37
SIMC1-201ENST00000332772 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
SIMC1-201ENST00000332772 ATP7AQ04656 1500 aa12.76□□□□□ -0.37
SIMC1-201ENST00000332772 ADGRL1O94910 1474 aa12.76□□□□□ -0.37
SIMC1-201ENST00000332772 POLR1AO95602 1720 aaPredicted RBP12.75□□□□□ -0.37
SIMC1-201ENST00000332772 ZNF518AQ6AHZ1 1483 aa12.73□□□□□ -0.37
SIMC1-201ENST00000332772 SPATA31E1Q6ZUB1 1445 aa12.73□□□□□ -0.37
SIMC1-201ENST00000332772 SCAPERQ9BY12 1400 aa12.73□□□□□ -0.37
SIMC1-201ENST00000332772 CD109Q6YHK3 1445 aa12.72□□□□□ -0.37
SIMC1-201ENST00000332772 VWDEQ8N2E2 1590 aa12.72□□□□□ -0.37
SIMC1-201ENST00000332772 NEO1Q92859 1461 aa12.71□□□□□ -0.37
SIMC1-201ENST00000332772 KDM5CP41229 1560 aa12.71□□□□□ -0.37
SIMC1-201ENST00000332772 CCDC144AA2RUR9 1427 aa12.71□□□□□ -0.37
SIMC1-201ENST00000332772 HSPA5P11021 654 aaKnown RBP12.71□□□□□ -0.37
SIMC1-201ENST00000332772 NBPF8Q3BBV2 869 aa12.71□□□□□ -0.37
SIMC1-201ENST00000332772 RALGAPBQ86X10 1494 aa12.71□□□□□ -0.38
SIMC1-201ENST00000332772 DDX10Q13206 875 aaKnown RBP12.7□□□□□ -0.38
SIMC1-201ENST00000332772 GLI2P10070 1586 aa12.7□□□□□ -0.38
SIMC1-201ENST00000332772 DHX29Q7Z478 1369 aaKnown RBP12.7□□□□□ -0.38
SIMC1-201ENST00000332772 TET3O43151 1660 aa12.7□□□□□ -0.38
SIMC1-201ENST00000332772 AFAP1Q8N556 730 aa12.7□□□□□ -0.38
SIMC1-201ENST00000332772 MLH3Q9UHC1 1453 aa12.69□□□□□ -0.38
SIMC1-201ENST00000332772 KIDINS220Q9ULH0 1771 aa12.69□□□□□ -0.38
SIMC1-201ENST00000332772 CCER2I3L3R5 266 aa12.69□□□□□ -0.38
SIMC1-201ENST00000332772 ARID4BQ4LE39 1312 aaPredicted RBP12.69□□□□□ -0.38
SIMC1-201ENST00000332772 BCORL1Q5H9F3 1711 aa12.69□□□□□ -0.38
SIMC1-201ENST00000332772 PLA2R1Q13018 1463 aa12.68□□□□□ -0.38
SIMC1-201ENST00000332772 PRDM15P57071 1507 aaPredicted RBP12.68□□□□□ -0.38
SIMC1-201ENST00000332772 NEURL4Q96JN8 1562 aa12.68□□□□□ -0.38
SIMC1-201ENST00000332772 STAC3Q96MF2 364 aa12.68□□□□□ -0.38
SIMC1-201ENST00000332772 KANK1Q14678 1352 aa12.67□□□□□ -0.38
SIMC1-201ENST00000332772 POGZQ7Z3K3 1410 aa12.67□□□□□ -0.38
SIMC1-201ENST00000332772 PTPRTO14522 1441 aa12.66□□□□□ -0.38
SIMC1-201ENST00000332772 LAMC1P11047 1609 aa12.66□□□□□ -0.38
SIMC1-201ENST00000332772 MAP3K4Q9Y6R4 1608 aa12.66□□□□□ -0.38
SIMC1-201ENST00000332772 E9PCH4 1651 aa12.66□□□□□ -0.38
SIMC1-201ENST00000332772 RNF17Q9BXT8 1623 aaKnown RBP12.66□□□□□ -0.38
SIMC1-201ENST00000332772 TRPM2O94759 1503 aa12.66□□□□□ -0.38
SIMC1-201ENST00000332772 ANP32CO43423 234 aa12.65□□□□□ -0.38
SIMC1-201ENST00000332772 LMTK2Q8IWU2 1503 aa12.65□□□□□ -0.38
SIMC1-201ENST00000332772 SPHKAPQ2M3C7 1700 aa12.65□□□□□ -0.39
SIMC1-201ENST00000332772 RIMBP3CA6NJZ7 1639 aa12.64□□□□□ -0.39
SIMC1-201ENST00000332772 RIMBP3BA6NNM3 1639 aa12.64□□□□□ -0.39
SIMC1-201ENST00000332772 RIMBP3Q9UFD9 1639 aa12.64□□□□□ -0.39
SIMC1-201ENST00000332772 HECW2Q9P2P5 1572 aa12.64□□□□□ -0.39
SIMC1-201ENST00000332772 WASHC2AQ641Q2 1341 aa12.64□□□□□ -0.39
SIMC1-201ENST00000332772 CCDC7Q96M83 1385 aa12.64□□□□□ -0.39
SIMC1-201ENST00000332772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.63□□□□□ -0.39
SIMC1-201ENST00000332772 HIRIP3Q9BW71 556 aaPredicted RBP12.63□□□□□ -0.39
SIMC1-201ENST00000332772 MROH1Q8NDA8 1641 aa12.63□□□□□ -0.39
SIMC1-201ENST00000332772 TRPM1Q7Z4N2 1603 aa12.63□□□□□ -0.39
SIMC1-201ENST00000332772 A2MP01023 1474 aa12.63□□□□□ -0.39
SIMC1-201ENST00000332772 CEP152O94986 1710 aa12.63□□□□□ -0.39
SIMC1-201ENST00000332772 PRAG1Q86YV5 1406 aa12.62□□□□□ -0.39
SIMC1-201ENST00000332772 CNTLNQ9NXG0 1405 aa12.62□□□□□ -0.39
SIMC1-201ENST00000332772 USP47Q96K76 1375 aa12.62□□□□□ -0.39
SIMC1-201ENST00000332772 GPRASP1Q5JY77 1395 aa12.61□□□□□ -0.39
SIMC1-201ENST00000332772 DCAF11Q8TEB1 546 aa12.59□□□□□ -0.39
SIMC1-201ENST00000332772 ROCK2O75116 1388 aaKnown RBP12.59□□□□□ -0.39
SIMC1-201ENST00000332772 EFCAB6Q5THR3 1501 aa12.59□□□□□ -0.39
SIMC1-201ENST00000332772 RICTORQ6R327 1708 aa12.59□□□□□ -0.39
SIMC1-201ENST00000332772 KIF3BO15066 747 aa12.57□□□□□ -0.4
SIMC1-201ENST00000332772 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
SIMC1-201ENST00000332772 CARD11Q9BXL7 1154 aa12.57□□□□□ -0.4
SIMC1-201ENST00000332772 FRMPD1Q5SYB0 1578 aa12.56□□□□□ -0.4
SIMC1-201ENST00000332772 ABCA6Q8N139 1617 aa12.56□□□□□ -0.4
SIMC1-201ENST00000332772 KIF7Q2M1P5 1343 aa12.56□□□□□ -0.4
SIMC1-201ENST00000332772 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
SIMC1-201ENST00000332772 KIAA1210Q9ULL0 1709 aa12.56□□□□□ -0.4
SIMC1-201ENST00000332772 CLTCL1P53675 1640 aa12.55□□□□□ -0.4
SIMC1-201ENST00000332772 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
SIMC1-201ENST00000332772 ZMYM4Q5VZL5 1548 aa12.55□□□□□ -0.4
SIMC1-201ENST00000332772 KIF1BO60333 1816 aa12.54□□□□□ -0.4
SIMC1-201ENST00000332772 C11orf95C9JLR9 678 aaPredicted RBP12.54□□□□□ -0.4
SIMC1-201ENST00000332772 CYB5RLQ6IPT4 315 aa12.54□□□□□ -0.4
SIMC1-201ENST00000332772 ZC3H13Q5T200 1668 aaKnown RBP12.54□□□□□ -0.4
SIMC1-201ENST00000332772 PPRC1Q5VV67 1664 aaKnown RBP12.54□□□□□ -0.4
SIMC1-201ENST00000332772 DIP2CQ9Y2E4 1556 aa12.53□□□□□ -0.4
SIMC1-201ENST00000332772 ZNF326Q5BKZ1 582 aaKnown RBP12.53□□□□□ -0.4
SIMC1-201ENST00000332772 MADDQ8WXG6 1647 aa12.53□□□□□ -0.4
SIMC1-201ENST00000332772 KDM2AQ9Y2K7 1162 aa12.53□□□□□ -0.4
SIMC1-201ENST00000332772 MYOM2P54296 1465 aa12.51□□□□□ -0.41
SIMC1-201ENST00000332772 REREQ9P2R6 1566 aa12.51□□□□□ -0.41
SIMC1-201ENST00000332772 ARHGAP31Q2M1Z3 1444 aa12.5□□□□□ -0.41
SIMC1-201ENST00000332772 RGL3Q3MIN7 710 aa12.5□□□□□ -0.41
SIMC1-201ENST00000332772 IFT172Q9UG01 1749 aa12.49□□□□□ -0.41
SIMC1-201ENST00000332772 ABCC3O15438 1527 aa12.49□□□□□ -0.41
SIMC1-201ENST00000332772 KTN1Q86UP2 1357 aaKnown RBP12.48□□□□□ -0.41
SIMC1-201ENST00000332772 IQGAP1P46940 1657 aa12.48□□□□□ -0.41
SIMC1-201ENST00000332772 CAMSAP1Q5T5Y3 1602 aa12.48□□□□□ -0.41
SIMC1-201ENST00000332772 SLC24A1O60721 1099 aa12.48□□□□□ -0.41
SIMC1-201ENST00000332772 POTEHQ6S545 545 aa12.48□□□□□ -0.41
SIMC1-201ENST00000332772 PRKRIP1Q9H875 184 aaPredicted RBP12.48□□□□□ -0.41
SIMC1-201ENST00000332772 ST20-MTHFSA0A0A6YYL1 179 aa12.47□□□□□ -0.41
SIMC1-201ENST00000332772 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms