RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 SPAG9O60271 1321 aaKnown RBP24.94■■□□□ 1.58
LYSMD4-201ENST00000332728 SALL2Q9Y467 1007 aaPredicted RBP24.94■■□□□ 1.58
LYSMD4-201ENST00000332728 ZCCHC11Q5TAX3 1644 aaKnown RBP24.93■■□□□ 1.58
LYSMD4-201ENST00000332728 ARHGEF5Q12774 1597 aa24.92■■□□□ 1.58
LYSMD4-201ENST00000332728 PLCH2O75038 1416 aa24.88■■□□□ 1.57
LYSMD4-201ENST00000332728 PLA2R1Q13018 1463 aa24.88■■□□□ 1.57
LYSMD4-201ENST00000332728 MYO5CQ9NQX4 1742 aa24.87■■□□□ 1.57
LYSMD4-201ENST00000332728 KIF3BO15066 747 aa24.87■■□□□ 1.57
LYSMD4-201ENST00000332728 TSHZ2Q9NRE2 1034 aa24.86■■□□□ 1.57
LYSMD4-201ENST00000332728 CLASP1Q7Z460 1538 aa24.85■■□□□ 1.57
LYSMD4-201ENST00000332728 DHX29Q7Z478 1369 aaKnown RBP24.85■■□□□ 1.57
LYSMD4-201ENST00000332728 KDM5CP41229 1560 aa24.82■■□□□ 1.56
LYSMD4-201ENST00000332728 CC2D1BQ5T0F9 858 aaKnown RBP24.81■■□□□ 1.56
LYSMD4-201ENST00000332728 TMC1Q8TDI8 760 aa24.81■■□□□ 1.56
LYSMD4-201ENST00000332728 SCAPERQ9BY12 1400 aa24.81■■□□□ 1.56
LYSMD4-201ENST00000332728 RALGAPBQ86X10 1494 aa24.8■■□□□ 1.56
LYSMD4-201ENST00000332728 KDM5DQ9BY66 1539 aa24.77■■□□□ 1.56
LYSMD4-201ENST00000332728 CHGAP10645 457 aaKnown RBP24.77■■□□□ 1.56
LYSMD4-201ENST00000332728 UHRF1BP1Q6BDS2 1440 aa24.77■■□□□ 1.56
LYSMD4-201ENST00000332728 A2MP01023 1474 aa24.77■■□□□ 1.56
LYSMD4-201ENST00000332728 PRAG1Q86YV5 1406 aa24.75■■□□□ 1.55
LYSMD4-201ENST00000332728 NPM1P06748 294 aaKnown RBP eCLIP24.73■■□□□ 1.55
LYSMD4-201ENST00000332728 OSCARQ8IYS5 282 aa24.72■■□□□ 1.55
LYSMD4-201ENST00000332728 FANCAO15360 1455 aa24.71■■□□□ 1.55
LYSMD4-201ENST00000332728 DISP3Q9P2K9 1392 aa24.71■■□□□ 1.55
LYSMD4-201ENST00000332728 GGT6Q6P531 493 aa24.71■■□□□ 1.55
LYSMD4-201ENST00000332728 ABCC1P33527 1531 aa24.7■■□□□ 1.54
LYSMD4-201ENST00000332728 DUOX2Q9NRD8 1548 aa24.7■■□□□ 1.54
LYSMD4-201ENST00000332728 ASXL2Q76L83 1435 aa24.69■■□□□ 1.54
LYSMD4-201ENST00000332728 WDR7Q9Y4E6 1490 aa24.69■■□□□ 1.54
LYSMD4-201ENST00000332728 PANK3Q9H999 370 aa24.67■■□□□ 1.54
LYSMD4-201ENST00000332728 NUTM2DQ5VT03 806 aaPredicted RBP24.67■■□□□ 1.54
LYSMD4-201ENST00000332728 B4GALNT3Q6L9W6 998 aa24.67■■□□□ 1.54
LYSMD4-201ENST00000332728 UHRF1BP1LA0JNW5 1464 aa24.66■■□□□ 1.54
LYSMD4-201ENST00000332728 ZBED9Q6R2W3 1325 aa24.65■■□□□ 1.54
LYSMD4-201ENST00000332728 ADGRL1O94910 1474 aa24.64■■□□□ 1.54
LYSMD4-201ENST00000332728 TESK2Q96S53 571 aa24.64■■□□□ 1.54
LYSMD4-201ENST00000332728 PNISRQ8TF01 805 aaKnown RBP24.64■■□□□ 1.53
LYSMD4-201ENST00000332728 UNC13BO14795 1591 aa24.64■■□□□ 1.53
LYSMD4-201ENST00000332728 RAPGEF3O95398 923 aa24.63■■□□□ 1.53
LYSMD4-201ENST00000332728 MAST1Q9Y2H9 1570 aa24.63■■□□□ 1.53
LYSMD4-201ENST00000332728 ERBINQ96RT1 1412 aa24.62■■□□□ 1.53
LYSMD4-201ENST00000332728 PLXNC1O60486 1568 aa24.61■■□□□ 1.53
LYSMD4-201ENST00000332728 UGGT1Q9NYU2 1555 aa24.6■■□□□ 1.53
LYSMD4-201ENST00000332728 CFAP65Q6ZU64 1925 aaKnown RBP24.59■■□□□ 1.53
LYSMD4-201ENST00000332728 POLR1AO95602 1720 aaPredicted RBP24.59■■□□□ 1.53
LYSMD4-201ENST00000332728 CFAP70Q5T0N1 1121 aa24.59■■□□□ 1.53
LYSMD4-201ENST00000332728 IQGAP3Q86VI3 1631 aa24.59■■□□□ 1.53
LYSMD4-201ENST00000332728 ZFYVE16Q7Z3T8 1539 aa24.57■■□□□ 1.52
LYSMD4-201ENST00000332728 TRPM1Q7Z4N2 1603 aa24.56■■□□□ 1.52
LYSMD4-201ENST00000332728 TMF1P82094 1093 aa24.56■■□□□ 1.52
LYSMD4-201ENST00000332728 CYB5RLQ6IPT4 315 aa24.56■■□□□ 1.52
LYSMD4-201ENST00000332728 MYBBP1AQ9BQG0 1328 aaKnown RBP24.55■■□□□ 1.52
LYSMD4-201ENST00000332728 ARID4BQ4LE39 1312 aaPredicted RBP24.54■■□□□ 1.52
LYSMD4-201ENST00000332728 ATP10AO60312 1499 aa24.54■■□□□ 1.52
LYSMD4-201ENST00000332728 KANK1Q14678 1352 aa24.53■■□□□ 1.52
LYSMD4-201ENST00000332728 ADGRF5Q8IZF2 1346 aa24.53■■□□□ 1.52
LYSMD4-201ENST00000332728 PER1O15534 1290 aaPredicted RBP24.53■■□□□ 1.52
LYSMD4-201ENST00000332728 ATP7AQ04656 1500 aa24.52■■□□□ 1.52
LYSMD4-201ENST00000332728 E9PCH4 1651 aa24.52■■□□□ 1.52
LYSMD4-201ENST00000332728 KTN1Q86UP2 1357 aaKnown RBP24.52■■□□□ 1.52
LYSMD4-201ENST00000332728 RALBP1Q15311 655 aa24.48■■□□□ 1.51
LYSMD4-201ENST00000332728 CD109Q6YHK3 1445 aa24.47■■□□□ 1.51
LYSMD4-201ENST00000332728 TMEM132EQ6IEE7 984 aa24.47■■□□□ 1.51
LYSMD4-201ENST00000332728 CDCA7LQ96GN5 454 aa24.47■■□□□ 1.51
LYSMD4-201ENST00000332728 RBM19Q9Y4C8 960 aaKnown RBP24.47■■□□□ 1.51
LYSMD4-201ENST00000332728 MAGI2Q86UL8 1455 aa24.46■■□□□ 1.51
LYSMD4-201ENST00000332728 NUDCQ9Y266 331 aa24.45■■□□□ 1.5
LYSMD4-201ENST00000332728 GPRASP1Q5JY77 1395 aa24.44■■□□□ 1.5
LYSMD4-201ENST00000332728 NLRP13Q86W25 1043 aa24.44■■□□□ 1.5
LYSMD4-201ENST00000332728 RTEL1-TNFRSF6BF6WH68 1400 aa24.44■■□□□ 1.5
LYSMD4-201ENST00000332728 TRAK1Q9UPV9 953 aa24.43■■□□□ 1.5
LYSMD4-201ENST00000332728 CLTCL1P53675 1640 aa24.43■■□□□ 1.5
LYSMD4-201ENST00000332728 WASHC2CQ9Y4E1 1318 aa24.42■■□□□ 1.5
LYSMD4-201ENST00000332728 COL17A1Q9UMD9 1497 aaPredicted RBP24.42■■□□□ 1.5
LYSMD4-201ENST00000332728 SAFB2Q14151 953 aaKnown RBP eCLIP24.42■■□□□ 1.5
LYSMD4-201ENST00000332728 KNSTRNQ9Y448 316 aa24.42■■□□□ 1.5
LYSMD4-201ENST00000332728 PPP4R2Q9NY27 417 aa24.4■■□□□ 1.5
LYSMD4-201ENST00000332728 TNNT2P45379 298 aaPredicted RBP24.4■■□□□ 1.5
LYSMD4-201ENST00000332728 ABCA9Q8IUA7 1624 aa24.39■■□□□ 1.5
LYSMD4-201ENST00000332728 PRDM15P57071 1507 aaPredicted RBP24.39■■□□□ 1.49
LYSMD4-201ENST00000332728 BRD4O60885 1362 aaPredicted RBP24.38■■□□□ 1.49
LYSMD4-201ENST00000332728 PARD3Q8TEW0 1356 aa24.36■■□□□ 1.49
LYSMD4-201ENST00000332728 INO80Q9ULG1 1556 aaPredicted RBP24.34■■□□□ 1.49
LYSMD4-201ENST00000332728 PLIN1O60240 522 aa24.34■■□□□ 1.49
LYSMD4-201ENST00000332728 ADAMTS8Q9UP79 889 aa24.34■■□□□ 1.49
LYSMD4-201ENST00000332728 CCDC146Q8IYE0 955 aa24.34■■□□□ 1.49
LYSMD4-201ENST00000332728 TRPM2O94759 1503 aa24.33■■□□□ 1.49
LYSMD4-201ENST00000332728 SPHKAPQ2M3C7 1700 aa24.33■■□□□ 1.49
LYSMD4-201ENST00000332728 PTPRTO14522 1441 aa24.33■■□□□ 1.48
LYSMD4-201ENST00000332728 KIDINS220Q9ULH0 1771 aa24.31■■□□□ 1.48
LYSMD4-201ENST00000332728 SMG6Q86US8 1419 aaKnown RBP24.31■■□□□ 1.48
LYSMD4-201ENST00000332728 NOS1P29475 1434 aa24.31■■□□□ 1.48
LYSMD4-201ENST00000332728 MADDQ8WXG6 1647 aa24.31■■□□□ 1.48
LYSMD4-201ENST00000332728 LRPPRCP42704 1394 aaKnown RBP24.3■■□□□ 1.48
LYSMD4-201ENST00000332728 STK26Q9P289 416 aa24.3■■□□□ 1.48
LYSMD4-201ENST00000332728 ZNF518AQ6AHZ1 1483 aa24.29■■□□□ 1.48
LYSMD4-201ENST00000332728 MLECQ14165 292 aa24.29■■□□□ 1.48
LYSMD4-201ENST00000332728 PPP2R1AP30153 589 aa24.29■■□□□ 1.48
LYSMD4-201ENST00000332728 CCDC136Q96JN2 1154 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms