RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 PHLDB1Q86UU1 1377 aa23.72■■□□□ 1.39
NPLOC4-201ENST00000331134 MCCP23508 829 aa23.72■■□□□ 1.39
NPLOC4-201ENST00000331134 DDX49Q9Y6V7 483 aaKnown RBP23.71■■□□□ 1.39
NPLOC4-201ENST00000331134 NUTM2DQ5VT03 806 aaPredicted RBP23.71■■□□□ 1.39
NPLOC4-201ENST00000331134 FRAT2O75474 233 aaPredicted RBP23.7■■□□□ 1.38
NPLOC4-201ENST00000331134 AKNAQ7Z591 1439 aa23.69■■□□□ 1.38
NPLOC4-201ENST00000331134 TRAK1Q9UPV9 953 aa23.64■■□□□ 1.37
NPLOC4-201ENST00000331134 ANKRD45Q5TZF3 282 aa23.63■■□□□ 1.37
NPLOC4-201ENST00000331134 SLC4A10Q6U841 1118 aa23.63■■□□□ 1.37
NPLOC4-201ENST00000331134 TRIM6-TRIM34B2RNG4 842 aa23.62■■□□□ 1.37
NPLOC4-201ENST00000331134 ZNF644Q9H582 1327 aaPredicted RBP23.62■■□□□ 1.37
NPLOC4-201ENST00000331134 DDX11L8A8MPP1 907 aa23.61■■□□□ 1.37
NPLOC4-201ENST00000331134 KIAA1211Q6ZU35 1233 aa23.61■■□□□ 1.37
NPLOC4-201ENST00000331134 CGNL1Q0VF96 1302 aa23.61■■□□□ 1.37
NPLOC4-201ENST00000331134 PANK1Q8TE04 598 aa23.6■■□□□ 1.37
NPLOC4-201ENST00000331134 CNTLNQ9NXG0 1405 aa23.6■■□□□ 1.37
NPLOC4-201ENST00000331134 NRDCO43847 1150 aa23.6■■□□□ 1.37
NPLOC4-201ENST00000331134 E9PSI1 815 aa23.59■■□□□ 1.37
NPLOC4-201ENST00000331134 PTMSP20962 102 aa23.59■■□□□ 1.37
NPLOC4-201ENST00000331134 SKAP1Q86WV1 359 aa23.59■■□□□ 1.37
NPLOC4-201ENST00000331134 MLECQ14165 292 aa23.58■■□□□ 1.37
NPLOC4-201ENST00000331134 KIF3BO15066 747 aa23.58■■□□□ 1.37
NPLOC4-201ENST00000331134 FAM13BQ9NYF5 915 aa23.58■■□□□ 1.37
NPLOC4-201ENST00000331134 GOLGA6L6A8MZA4 724 aa23.58■■□□□ 1.36
NPLOC4-201ENST00000331134 KIF21BO75037 1637 aa23.58■■□□□ 1.36
NPLOC4-201ENST00000331134 KANK1Q14678 1352 aa23.57■■□□□ 1.36
NPLOC4-201ENST00000331134 RTF1Q92541 710 aaKnown RBP23.56■■□□□ 1.36
NPLOC4-201ENST00000331134 ADAMTS8Q9UP79 889 aa23.55■■□□□ 1.36
NPLOC4-201ENST00000331134 ZKSCAN2Q63HK3 967 aa23.55■■□□□ 1.36
NPLOC4-201ENST00000331134 HDGFL2Q7Z4V5 671 aaPredicted RBP23.55■■□□□ 1.36
NPLOC4-201ENST00000331134 SYAP1Q96A49 352 aaPredicted RBP23.55■■□□□ 1.36
NPLOC4-201ENST00000331134 TULP1O00294 542 aaPredicted RBP23.54■■□□□ 1.36
NPLOC4-201ENST00000331134 CHMP5Q9NZZ3 219 aa23.53■■□□□ 1.36
NPLOC4-201ENST00000331134 BACH2Q9BYV9 841 aa23.53■■□□□ 1.36
NPLOC4-201ENST00000331134 CFAP44Q96MT7 982 aa23.52■■□□□ 1.36
NPLOC4-201ENST00000331134 NBPF8Q3BBV2 869 aa23.51■■□□□ 1.35
NPLOC4-201ENST00000331134 LNPKQ9C0E8 428 aa23.51■■□□□ 1.35
NPLOC4-201ENST00000331134 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.51■■□□□ 1.352e-6■■■■□ 23
NPLOC4-201ENST00000331134 ST18O60284 1047 aa23.49■■□□□ 1.35
NPLOC4-201ENST00000331134 UACAQ9BZF9 1416 aa23.49■■□□□ 1.35
NPLOC4-201ENST00000331134 HAP1P54257 671 aaPredicted RBP23.49■■□□□ 1.35
NPLOC4-201ENST00000331134 CCDC144AA2RUR9 1427 aa23.48■■□□□ 1.35
NPLOC4-201ENST00000331134 FGD6Q6ZV73 1430 aa23.47■■□□□ 1.35
NPLOC4-201ENST00000331134 FAM43AQ8N2R8 423 aa23.46■■□□□ 1.35
NPLOC4-201ENST00000331134 ARAP1Q96P48 1450 aa23.46■■□□□ 1.35
NPLOC4-201ENST00000331134 IGF1RP08069 1367 aa23.46■■□□□ 1.35
NPLOC4-201ENST00000331134 C22orf23Q9BZE7 217 aa23.45■■□□□ 1.35
NPLOC4-201ENST00000331134 NUTM2FA1L443 756 aa23.45■■□□□ 1.34
NPLOC4-201ENST00000331134 EFCAB2Q5VUJ9 269 aa23.45■■□□□ 1.34
NPLOC4-201ENST00000331134 PNISRQ8TF01 805 aaKnown RBP23.44■■□□□ 1.34
NPLOC4-201ENST00000331134 RILPL2Q969X0 211 aa23.44■■□□□ 1.34
NPLOC4-201ENST00000331134 DZIP1LQ8IYY4 767 aaKnown RBP23.43■■□□□ 1.34
NPLOC4-201ENST00000331134 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
NPLOC4-201ENST00000331134 PRKCSHP14314 528 aaPredicted RBP23.41■■□□□ 1.34
NPLOC4-201ENST00000331134 STK31Q9BXU1 1019 aa23.41■■□□□ 1.34
NPLOC4-201ENST00000331134 HMMRO75330 724 aa23.41■■□□□ 1.34
NPLOC4-201ENST00000331134 SKOR2Q2VWA4 1001 aaPredicted RBP23.41■■□□□ 1.34
NPLOC4-201ENST00000331134 TRAK2O60296 914 aa23.4■■□□□ 1.34
NPLOC4-201ENST00000331134 EIF3AQ14152 1382 aaKnown RBP23.39■■□□□ 1.34
NPLOC4-201ENST00000331134 CHMP3Q9Y3E7 222 aa23.39■■□□□ 1.34
NPLOC4-201ENST00000331134 BCAR3O75815 825 aa23.39■■□□□ 1.34
NPLOC4-201ENST00000331134 LRRC9Q6ZRR7 1453 aa23.39■■□□□ 1.33
NPLOC4-201ENST00000331134 SMARCA2P51531 1590 aa23.39■■□□□ 1.33
NPLOC4-201ENST00000331134 TERF2IPQ9NYB0 399 aa23.38■■□□□ 1.33
NPLOC4-201ENST00000331134 ATAD2BQ9ULI0 1458 aa23.37■■□□□ 1.33
NPLOC4-201ENST00000331134 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
NPLOC4-201ENST00000331134 RNF214Q8ND24 703 aa23.36■■□□□ 1.33
NPLOC4-201ENST00000331134 C11orf95C9JLR9 678 aaPredicted RBP23.36■■□□□ 1.33
NPLOC4-201ENST00000331134 MCTP1Q6DN14 999 aa23.36■■□□□ 1.33
NPLOC4-201ENST00000331134 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
NPLOC4-201ENST00000331134 BCL11BQ9C0K0 894 aaPredicted RBP23.36■■□□□ 1.33
NPLOC4-201ENST00000331134 DDX19BQ9UMR2 479 aa23.35■■□□□ 1.33
NPLOC4-201ENST00000331134 NBPF1Q3BBV0 1214 aa23.34■■□□□ 1.33
NPLOC4-201ENST00000331134 R3HCC1Q9Y3T6 440 aaKnown RBP23.34■■□□□ 1.33
NPLOC4-201ENST00000331134 CARMIL2Q6F5E8 1435 aa23.34■■□□□ 1.33
NPLOC4-201ENST00000331134 GNL2Q13823 731 aaKnown RBP23.34■■□□□ 1.33
NPLOC4-201ENST00000331134 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.33■■□□□ 1.33
NPLOC4-201ENST00000331134 BRD4O60885 1362 aaPredicted RBP23.33■■□□□ 1.33
NPLOC4-201ENST00000331134 SPAG9O60271 1321 aaKnown RBP23.33■■□□□ 1.33
NPLOC4-201ENST00000331134 MRE11P49959 708 aa23.32■■□□□ 1.32
NPLOC4-201ENST00000331134 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
NPLOC4-201ENST00000331134 PDZRN3Q9UPQ7 1066 aa23.31■■□□□ 1.32
NPLOC4-201ENST00000331134 HSP90B1P14625 803 aaKnown RBP23.31■■□□□ 1.32
NPLOC4-201ENST00000331134 MYOM3Q5VTT5 1437 aa23.31■■□□□ 1.32
NPLOC4-201ENST00000331134 RIPK4P57078 832 aa23.3■■□□□ 1.32
NPLOC4-201ENST00000331134 TNNT3P45378 269 aaPredicted RBP23.3■■□□□ 1.32
NPLOC4-201ENST00000331134 ERCC6Q03468 1493 aa23.3■■□□□ 1.32
NPLOC4-201ENST00000331134 PHF14O94880 888 aa23.3■■□□□ 1.32
NPLOC4-201ENST00000331134 LTV1Q96GA3 475 aaPredicted RBP23.3■■□□□ 1.32
NPLOC4-201ENST00000331134 SMARCA4P51532 1647 aa23.29■■□□□ 1.32
NPLOC4-201ENST00000331134 NASPP49321 788 aaPredicted RBP23.29■■□□□ 1.32
NPLOC4-201ENST00000331134 ZNF592Q92610 1267 aa23.28■■□□□ 1.32
NPLOC4-201ENST00000331134 MPNDQ8N594 471 aa23.28■■□□□ 1.32
NPLOC4-201ENST00000331134 ZNF330Q9Y3S2 320 aaPredicted RBP23.28■■□□□ 1.32
NPLOC4-201ENST00000331134 KIF16BQ96L93 1317 aa23.28■■□□□ 1.32
NPLOC4-201ENST00000331134 RBM10P98175 930 aaKnown RBP23.28■■□□□ 1.32
NPLOC4-201ENST00000331134 TCP11L2Q8N4U5 519 aa23.26■■□□□ 1.31
NPLOC4-201ENST00000331134 NECTIN2Q92692 538 aa23.26■■□□□ 1.31
NPLOC4-201ENST00000331134 CCDC9Q9Y3X0 531 aaKnown RBP23.26■■□□□ 1.31
NPLOC4-201ENST00000331134 ANO2Q9NQ90 1003 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms