RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.96■■□□□ 1.27
PRKCD-201ENST00000330452 POLR3GLQ9BT43 218 aa22.96■■□□□ 1.27
PRKCD-201ENST00000330452 CROCC2H7BZ55 1655 aa22.96■■□□□ 1.27
PRKCD-201ENST00000330452 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
PRKCD-201ENST00000330452 MBD5Q9P267 1494 aa22.94■■□□□ 1.26
PRKCD-201ENST00000330452 C9orf84Q5VXU9 1444 aa22.94■■□□□ 1.26
PRKCD-201ENST00000330452 PPP4R2Q9NY27 417 aa22.94■■□□□ 1.26
PRKCD-201ENST00000330452 USP35Q9P2H5 1018 aa22.94■■□□□ 1.26
PRKCD-201ENST00000330452 NUP155O75694 1391 aa22.93■■□□□ 1.26
PRKCD-201ENST00000330452 FGD1P98174 961 aa22.93■■□□□ 1.26
PRKCD-201ENST00000330452 TTC37Q6PGP7 1564 aa22.93■■□□□ 1.26
PRKCD-201ENST00000330452 ANP32AP39687 249 aaKnown RBP22.93■■□□□ 1.26
PRKCD-201ENST00000330452 USP47Q96K76 1375 aa22.93■■□□□ 1.26
PRKCD-201ENST00000330452 NEFMP07197 916 aa22.91■■□□□ 1.26
PRKCD-201ENST00000330452 PDE4CQ08493 712 aa22.91■■□□□ 1.26
PRKCD-201ENST00000330452 RBM10P98175 930 aaKnown RBP22.9■■□□□ 1.26
PRKCD-201ENST00000330452 AAMPQ13685 434 aa22.9■■□□□ 1.26
PRKCD-201ENST00000330452 ARHGAP5Q13017 1502 aa22.89■■□□□ 1.26
PRKCD-201ENST00000330452 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.25
PRKCD-201ENST00000330452 ABCC2Q92887 1545 aa22.89■■□□□ 1.25
PRKCD-201ENST00000330452 KIF15Q9NS87 1388 aa22.88■■□□□ 1.25
PRKCD-201ENST00000330452 POLR1AO95602 1720 aaPredicted RBP22.87■■□□□ 1.25
PRKCD-201ENST00000330452 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.87■■□□□ 1.25
PRKCD-201ENST00000330452 CDC42BPBQ9Y5S2 1711 aa22.87■■□□□ 1.25
PRKCD-201ENST00000330452 BCORL1Q5H9F3 1711 aa22.86■■□□□ 1.25
PRKCD-201ENST00000330452 SAMD9LQ8IVG5 1584 aa22.86■■□□□ 1.25
PRKCD-201ENST00000330452 DHX29Q7Z478 1369 aaKnown RBP22.86■■□□□ 1.25
PRKCD-201ENST00000330452 ZBED9Q6R2W3 1325 aa22.85■■□□□ 1.25
PRKCD-201ENST00000330452 SYCP2Q9BX26 1530 aa22.85■■□□□ 1.25
PRKCD-201ENST00000330452 KDM2AQ9Y2K7 1162 aa22.85■■□□□ 1.25
PRKCD-201ENST00000330452 SHANK2Q9UPX8 1470 aa22.83■■□□□ 1.25
PRKCD-201ENST00000330452 FAM43AQ8N2R8 423 aa22.83■■□□□ 1.25
PRKCD-201ENST00000330452 AFAP1Q8N556 730 aa22.82■■□□□ 1.24
PRKCD-201ENST00000330452 CARD11Q9BXL7 1154 aa22.81■■□□□ 1.24
PRKCD-201ENST00000330452 KDM5CP41229 1560 aa22.8■■□□□ 1.24
PRKCD-201ENST00000330452 ZCCHC11Q5TAX3 1644 aaKnown RBP22.8■■□□□ 1.24
PRKCD-201ENST00000330452 B4GALNT3Q6L9W6 998 aa22.79■■□□□ 1.24
PRKCD-201ENST00000330452 UHRF1BP1Q6BDS2 1440 aa22.78■■□□□ 1.24
PRKCD-201ENST00000330452 OSCARQ8IYS5 282 aa22.78■■□□□ 1.24
PRKCD-201ENST00000330452 ARHGEF12Q9NZN5 1544 aa22.78■■□□□ 1.24
PRKCD-201ENST00000330452 DCAF11Q8TEB1 546 aa22.77■■□□□ 1.24
PRKCD-201ENST00000330452 GSE1Q14687 1217 aa22.76■■□□□ 1.23
PRKCD-201ENST00000330452 RALGAPBQ86X10 1494 aa22.76■■□□□ 1.23
PRKCD-201ENST00000330452 PREX2Q70Z35 1606 aa22.76■■□□□ 1.23
PRKCD-201ENST00000330452 SENP3-EIF4A1A0A087X0R7 540 aa22.75■■□□□ 1.23
PRKCD-201ENST00000330452 RGL3Q3MIN7 710 aa22.75■■□□□ 1.23
PRKCD-201ENST00000330452 LAS1LQ9Y4W2 734 aaKnown RBP22.75■■□□□ 1.23
PRKCD-201ENST00000330452 CCDC141Q6ZP82 1450 aa22.75■■□□□ 1.23
PRKCD-201ENST00000330452 ST20-MTHFSA0A0A6YYL1 179 aa22.74■■□□□ 1.23
PRKCD-201ENST00000330452 PDIA4P13667 645 aaKnown RBP22.74■■□□□ 1.23
PRKCD-201ENST00000330452 KDM5DQ9BY66 1539 aa22.73■■□□□ 1.23
PRKCD-201ENST00000330452 ARID4BQ4LE39 1312 aaPredicted RBP22.73■■□□□ 1.23
PRKCD-201ENST00000330452 EFCAB2Q5VUJ9 269 aa22.72■■□□□ 1.23
PRKCD-201ENST00000330452 TRAPPC8Q9Y2L5 1435 aa22.71■■□□□ 1.23
PRKCD-201ENST00000330452 ARHGEF5Q12774 1597 aa22.71■■□□□ 1.23
PRKCD-201ENST00000330452 HSP90AA2PQ14568 343 aaPredicted RBP22.71■■□□□ 1.23
PRKCD-201ENST00000330452 PLEKHH2Q8IVE3 1493 aa22.69■■□□□ 1.22
PRKCD-201ENST00000330452 RRP9O43818 475 aaKnown RBP22.68■■□□□ 1.22
PRKCD-201ENST00000330452 ROCK2O75116 1388 aaKnown RBP22.66■■□□□ 1.22
PRKCD-201ENST00000330452 FAM135AQ9P2D6 1515 aa22.66■■□□□ 1.22
PRKCD-201ENST00000330452 PLCH2O75038 1416 aa22.66■■□□□ 1.22
PRKCD-201ENST00000330452 BCL11BQ9C0K0 894 aaPredicted RBP22.65■■□□□ 1.22
PRKCD-201ENST00000330452 MYO5CQ9NQX4 1742 aa22.65■■□□□ 1.22
PRKCD-201ENST00000330452 TMC1Q8TDI8 760 aa22.65■■□□□ 1.22
PRKCD-201ENST00000330452 PNISRQ8TF01 805 aaKnown RBP22.65■■□□□ 1.22
PRKCD-201ENST00000330452 PPM1GO15355 546 aaPredicted RBP22.64■■□□□ 1.21
PRKCD-201ENST00000330452 RSPH4AQ5TD94 716 aa22.63■■□□□ 1.21
PRKCD-201ENST00000330452 SMG6Q86US8 1419 aaKnown RBP22.62■■□□□ 1.21
PRKCD-201ENST00000330452 FRAT1Q92837 279 aaPredicted RBP22.61■■□□□ 1.21
PRKCD-201ENST00000330452 SPAG9O60271 1321 aaKnown RBP22.6■■□□□ 1.21
PRKCD-201ENST00000330452 NUDCQ9Y266 331 aa22.6■■□□□ 1.21
PRKCD-201ENST00000330452 CCDC144AA2RUR9 1427 aa22.6■■□□□ 1.21
PRKCD-201ENST00000330452 UHRF1BP1LA0JNW5 1464 aa22.59■■□□□ 1.21
PRKCD-201ENST00000330452 ASXL2Q76L83 1435 aa22.59■■□□□ 1.21
PRKCD-201ENST00000330452 NBPF1Q3BBV0 1214 aa22.59■■□□□ 1.21
PRKCD-201ENST00000330452 CYB5RLQ6IPT4 315 aa22.58■■□□□ 1.2
PRKCD-201ENST00000330452 WDR7Q9Y4E6 1490 aa22.57■■□□□ 1.2
PRKCD-201ENST00000330452 NPM1P06748 294 aaKnown RBP eCLIP22.57■■□□□ 1.2
PRKCD-201ENST00000330452 PLA2R1Q13018 1463 aa22.56■■□□□ 1.2
PRKCD-201ENST00000330452 PRAG1Q86YV5 1406 aa22.56■■□□□ 1.2
PRKCD-201ENST00000330452 MYBBP1AQ9BQG0 1328 aaKnown RBP22.54■■□□□ 1.2
PRKCD-201ENST00000330452 SCAPERQ9BY12 1400 aa22.53■■□□□ 1.2
PRKCD-201ENST00000330452 FANCAO15360 1455 aa22.52■■□□□ 1.2
PRKCD-201ENST00000330452 RALBP1Q15311 655 aa22.52■■□□□ 1.2
PRKCD-201ENST00000330452 HSP90AA1P07900 732 aaKnown RBP22.51■■□□□ 1.19
PRKCD-201ENST00000330452 KIF3BO15066 747 aa22.51■■□□□ 1.19
PRKCD-201ENST00000330452 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
PRKCD-201ENST00000330452 A2MP01023 1474 aa22.5■■□□□ 1.19
PRKCD-201ENST00000330452 TRPM1Q7Z4N2 1603 aa22.5■■□□□ 1.19
PRKCD-201ENST00000330452 ABCC1P33527 1531 aa22.5■■□□□ 1.19
PRKCD-201ENST00000330452 RRAGDQ9NQL2 400 aaPredicted RBP22.49■■□□□ 1.19
PRKCD-201ENST00000330452 LRPPRCP42704 1394 aaKnown RBP22.49■■□□□ 1.19
PRKCD-201ENST00000330452 RNF123Q5XPI4 1314 aa22.49■■□□□ 1.19
PRKCD-201ENST00000330452 UNC13BO14795 1591 aa22.48■■□□□ 1.19
PRKCD-201ENST00000330452 MAST1Q9Y2H9 1570 aa22.48■■□□□ 1.19
PRKCD-201ENST00000330452 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
PRKCD-201ENST00000330452 E9PCH4 1651 aa22.47■■□□□ 1.19
PRKCD-201ENST00000330452 NPM2Q86SE8 214 aaKnown RBP22.45■■□□□ 1.19
PRKCD-201ENST00000330452 SENP3Q9H4L4 574 aaPredicted RBP22.45■■□□□ 1.19
PRKCD-201ENST00000330452 KTN1Q86UP2 1357 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms