RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 ABCA8O94911 1581 aa19.84■□□□□ 0.77
RGPD6-202ENST00000330331 C8orf34Q49A92 452 aa19.83■□□□□ 0.77
RGPD6-202ENST00000330331 KDM6BO15054 1643 aa19.83■□□□□ 0.77
RGPD6-202ENST00000330331 LRPPRCP42704 1394 aaKnown RBP19.83■□□□□ 0.76
RGPD6-202ENST00000330331 PTPRGP23470 1445 aa19.83■□□□□ 0.76
RGPD6-202ENST00000330331 MYOM3Q5VTT5 1437 aa19.83■□□□□ 0.76
RGPD6-202ENST00000330331 FAM161AQ3B820 660 aa19.83■□□□□ 0.76
RGPD6-202ENST00000330331 HSP90AA1P07900 732 aaKnown RBP19.82■□□□□ 0.76
RGPD6-202ENST00000330331 C20orf194Q5TEA3 1177 aa19.81■□□□□ 0.76
RGPD6-202ENST00000330331 POLR1AO95602 1720 aaPredicted RBP19.81■□□□□ 0.76
RGPD6-202ENST00000330331 PNNQ9H307 717 aaKnown RBP19.8■□□□□ 0.76
RGPD6-202ENST00000330331 RGS3P49796 1198 aa19.79■□□□□ 0.76
RGPD6-202ENST00000330331 ARHGEF11O15085 1522 aa19.78■□□□□ 0.76
RGPD6-202ENST00000330331 L1TD1Q5T7N2 865 aaKnown RBP19.77■□□□□ 0.76
RGPD6-202ENST00000330331 TEX14Q8IWB6 1497 aa19.77■□□□□ 0.76
RGPD6-202ENST00000330331 RRP9O43818 475 aaKnown RBP19.76■□□□□ 0.75
RGPD6-202ENST00000330331 BCORL1Q5H9F3 1711 aa19.76■□□□□ 0.75
RGPD6-202ENST00000330331 USP47Q96K76 1375 aa19.76■□□□□ 0.75
RGPD6-202ENST00000330331 RPRD2Q5VT52 1461 aaKnown RBP19.76■□□□□ 0.75
RGPD6-202ENST00000330331 PLEKHG5O94827 1062 aa19.76■□□□□ 0.75
RGPD6-202ENST00000330331 ANKRD30BQ9BXX2 1392 aa19.76■□□□□ 0.75
RGPD6-202ENST00000330331 PDE3BQ13370 1112 aa19.75■□□□□ 0.75
RGPD6-202ENST00000330331 KDM2BQ8NHM5 1336 aa19.75■□□□□ 0.75
RGPD6-202ENST00000330331 MYBBP1AQ9BQG0 1328 aaKnown RBP19.75■□□□□ 0.75
RGPD6-202ENST00000330331 KTN1Q86UP2 1357 aaKnown RBP19.75■□□□□ 0.75
RGPD6-202ENST00000330331 SLKQ9H2G2 1235 aaPredicted RBP19.74■□□□□ 0.75
RGPD6-202ENST00000330331 PODXL2Q9NZ53 605 aa19.74■□□□□ 0.75
RGPD6-202ENST00000330331 BRD4O60885 1362 aaPredicted RBP19.74■□□□□ 0.75
RGPD6-202ENST00000330331 MIA2Q96PC5 1412 aa19.73■□□□□ 0.75
RGPD6-202ENST00000330331 ATP10BO94823 1461 aa19.72■□□□□ 0.75
RGPD6-202ENST00000330331 KIF15Q9NS87 1388 aa19.72■□□□□ 0.75
RGPD6-202ENST00000330331 CENPQQ7L2Z9 268 aaPredicted RBP19.72■□□□□ 0.75
RGPD6-202ENST00000330331 XRCC6P12956 609 aaKnown RBP eCLIP19.7■□□□□ 0.74
RGPD6-202ENST00000330331 OSCARQ8IYS5 282 aa19.7■□□□□ 0.74
RGPD6-202ENST00000330331 TROQ12816 1431 aaPredicted RBP19.7■□□□□ 0.74
RGPD6-202ENST00000330331 SLC4A1APQ9BWU0 796 aaKnown RBP19.7■□□□□ 0.74
RGPD6-202ENST00000330331 PANK2Q9BZ23 570 aa19.7■□□□□ 0.74
RGPD6-202ENST00000330331 CLCN1P35523 988 aa19.69■□□□□ 0.74
RGPD6-202ENST00000330331 ARID4BQ4LE39 1312 aaPredicted RBP19.69■□□□□ 0.74
RGPD6-202ENST00000330331 GCC2Q8IWJ2 1684 aa19.68■□□□□ 0.74
RGPD6-202ENST00000330331 RALBP1Q15311 655 aa19.67■□□□□ 0.74
RGPD6-202ENST00000330331 ABCC2Q92887 1545 aa19.66■□□□□ 0.74
RGPD6-202ENST00000330331 GZF1Q9H116 711 aaPredicted RBP19.66■□□□□ 0.74
RGPD6-202ENST00000330331 KIF14Q15058 1648 aa19.65■□□□□ 0.74
RGPD6-202ENST00000330331 ADCY10Q96PN6 1610 aa19.65■□□□□ 0.74
RGPD6-202ENST00000330331 GOLGA6L3A6NEY3 463 aa19.64■□□□□ 0.73
RGPD6-202ENST00000330331 PLEKHD1A6NEE1 506 aa19.64■□□□□ 0.73
RGPD6-202ENST00000330331 ROCK2O75116 1388 aaKnown RBP19.62■□□□□ 0.73
RGPD6-202ENST00000330331 NLRP13Q86W25 1043 aa19.61■□□□□ 0.73
RGPD6-202ENST00000330331 USP19O94966 1318 aa19.61■□□□□ 0.73
RGPD6-202ENST00000330331 SEC24BO95487 1268 aa19.6■□□□□ 0.73
RGPD6-202ENST00000330331 TCOF1Q13428 1488 aaKnown RBP19.6■□□□□ 0.73
RGPD6-202ENST00000330331 BECN1Q14457 450 aa19.58■□□□□ 0.72
RGPD6-202ENST00000330331 CARD11Q9BXL7 1154 aa19.58■□□□□ 0.72
RGPD6-202ENST00000330331 UHRF1BP1LA0JNW5 1464 aa19.57■□□□□ 0.72
RGPD6-202ENST00000330331 ST20-MTHFSA0A0A6YYL1 179 aa19.57■□□□□ 0.72
RGPD6-202ENST00000330331 ITSN2Q9NZM3 1697 aa19.57■□□□□ 0.72
RGPD6-202ENST00000330331 FSD2A1L4K1 749 aa19.56■□□□□ 0.72
RGPD6-202ENST00000330331 SPRYD3Q8NCJ5 442 aa19.56■□□□□ 0.72
RGPD6-202ENST00000330331 ZCCHC11Q5TAX3 1644 aaKnown RBP19.55■□□□□ 0.72
RGPD6-202ENST00000330331 KDM5CP41229 1560 aa19.55■□□□□ 0.72
RGPD6-202ENST00000330331 GPATCH8Q9UKJ3 1502 aaKnown RBP19.55■□□□□ 0.72
RGPD6-202ENST00000330331 ANTXR1Q9H6X2 564 aa19.53■□□□□ 0.72
RGPD6-202ENST00000330331 ABCC10Q5T3U5 1492 aa19.53■□□□□ 0.72
RGPD6-202ENST00000330331 CDC42BPAQ5VT25 1732 aa19.53■□□□□ 0.72
RGPD6-202ENST00000330331 CC2D1BQ5T0F9 858 aaKnown RBP19.52■□□□□ 0.71
RGPD6-202ENST00000330331 ERBB4Q15303 1308 aa19.51■□□□□ 0.71
RGPD6-202ENST00000330331 ZNF644Q9H582 1327 aaPredicted RBP19.5■□□□□ 0.71
RGPD6-202ENST00000330331 ESPNB1AK53 854 aa19.5■□□□□ 0.71
RGPD6-202ENST00000330331 CFDP1Q9UEE9 299 aaPredicted RBP19.5■□□□□ 0.71
RGPD6-202ENST00000330331 MBD5Q9P267 1494 aa19.5■□□□□ 0.71
RGPD6-202ENST00000330331 KDM2AQ9Y2K7 1162 aa19.5■□□□□ 0.71
RGPD6-202ENST00000330331 PARD3Q8TEW0 1356 aa19.48■□□□□ 0.71
RGPD6-202ENST00000330331 MCM4P33991 863 aa19.47■□□□□ 0.71
RGPD6-202ENST00000330331 MYH16Q9H6N6 1097 aa19.47■□□□□ 0.71
RGPD6-202ENST00000330331 IGHDP01880 384 aa19.47■□□□□ 0.71
RGPD6-202ENST00000330331 CAMSAP2Q08AD1 1489 aa19.46■□□□□ 0.71
RGPD6-202ENST00000330331 A0A0U1RQG5 324 aaPredicted RBP19.46■□□□□ 0.71
RGPD6-202ENST00000330331 DUSP27Q5VZP5 1158 aa19.45■□□□□ 0.7
RGPD6-202ENST00000330331 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.45■□□□□ 0.7
RGPD6-202ENST00000330331 DNMT1P26358 1616 aaKnown RBP19.45■□□□□ 0.7
RGPD6-202ENST00000330331 MRE11P49959 708 aa19.45■□□□□ 0.7
RGPD6-202ENST00000330331 TBC1D2Q9BYX2 928 aa19.45■□□□□ 0.7
RGPD6-202ENST00000330331 TRAK2O60296 914 aa19.44■□□□□ 0.7
RGPD6-202ENST00000330331 PDCL3Q9H2J4 239 aa19.44■□□□□ 0.7
RGPD6-202ENST00000330331 ZNF777Q9ULD5 760 aaPredicted RBP19.44■□□□□ 0.7
RGPD6-202ENST00000330331 BLMP54132 1417 aaPredicted RBP19.44■□□□□ 0.7
RGPD6-202ENST00000330331 TTC37Q6PGP7 1564 aa19.43■□□□□ 0.7
RGPD6-202ENST00000330331 DAPK1P53355 1430 aa19.43■□□□□ 0.7
RGPD6-202ENST00000330331 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.43■□□□□ 0.7
RGPD6-202ENST00000330331 PKD2Q13563 968 aa19.43■□□□□ 0.7
RGPD6-202ENST00000330331 GRPEL1Q9HAV7 217 aa19.43■□□□□ 0.7
RGPD6-202ENST00000330331 ADAMTS8Q9UP79 889 aa19.43■□□□□ 0.7
RGPD6-202ENST00000330331 CDC42BPBQ9Y5S2 1711 aa19.42■□□□□ 0.7
RGPD6-202ENST00000330331 PREX2Q70Z35 1606 aa19.42■□□□□ 0.7
RGPD6-202ENST00000330331 ABCC5O15440 1437 aa19.42■□□□□ 0.7
RGPD6-202ENST00000330331 TPM2P07951 284 aa19.41■□□□□ 0.7
RGPD6-202ENST00000330331 TRIM44Q96DX7 344 aaPredicted RBP19.41■□□□□ 0.7
RGPD6-202ENST00000330331 ZMYM4Q5VZL5 1548 aa19.4■□□□□ 0.7
RGPD6-202ENST00000330331 RBM10P98175 930 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms