RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CARD11Q9BXL7 1154 aa20.09■□□□□ 0.81
TPM3-206ENST00000330188 PLA2R1Q13018 1463 aa20.09■□□□□ 0.81
TPM3-206ENST00000330188 CCDC144AA2RUR9 1427 aa20.08■□□□□ 0.81
TPM3-206ENST00000330188 DCAF11Q8TEB1 546 aa20.08■□□□□ 0.81
TPM3-206ENST00000330188 KDM2AQ9Y2K7 1162 aa20.08■□□□□ 0.81
TPM3-206ENST00000330188 ERBINQ96RT1 1412 aa20.08■□□□□ 0.8
TPM3-206ENST00000330188 EFCAB2Q5VUJ9 269 aa20.07■□□□□ 0.8
TPM3-206ENST00000330188 BCANQ96GW7 911 aa20.07■□□□□ 0.8
TPM3-206ENST00000330188 TRPM1Q7Z4N2 1603 aa20.06■□□□□ 0.8
TPM3-206ENST00000330188 MRS2Q9HD23 443 aa20.06■□□□□ 0.8
TPM3-206ENST00000330188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.05■□□□□ 0.84e-9■■■■■ 28.1
TPM3-206ENST00000330188 ARAP3Q8WWN8 1544 aa20.04■□□□□ 0.8
TPM3-206ENST00000330188 PRAG1Q86YV5 1406 aa20.04■□□□□ 0.8
TPM3-206ENST00000330188 TRAPPC8Q9Y2L5 1435 aa20.04■□□□□ 0.8
TPM3-206ENST00000330188 ROCK2O75116 1388 aaKnown RBP20.03■□□□□ 0.8
TPM3-206ENST00000330188 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.8
TPM3-206ENST00000330188 FAM9BQ8IZU0 186 aa20.02■□□□□ 0.79
TPM3-206ENST00000330188 ATP10AO60312 1499 aa20.01■□□□□ 0.79
TPM3-206ENST00000330188 A2MP01023 1474 aa20.01■□□□□ 0.79
TPM3-206ENST00000330188 ST20-MTHFSA0A0A6YYL1 179 aa20■□□□□ 0.79
TPM3-206ENST00000330188 E9PCH4 1651 aa19.99■□□□□ 0.79
TPM3-206ENST00000330188 ZFYVE16Q7Z3T8 1539 aa19.98■□□□□ 0.79
TPM3-206ENST00000330188 LAMC1P11047 1609 aa19.97■□□□□ 0.79
TPM3-206ENST00000330188 WDR7Q9Y4E6 1490 aa19.97■□□□□ 0.79
TPM3-206ENST00000330188 RTEL1-TNFRSF6BF6WH68 1400 aa19.97■□□□□ 0.79
TPM3-206ENST00000330188 RGL3Q3MIN7 710 aa19.96■□□□□ 0.79
TPM3-206ENST00000330188 TSHZ2Q9NRE2 1034 aa19.96■□□□□ 0.79
TPM3-206ENST00000330188 GPRASP1Q5JY77 1395 aa19.96■□□□□ 0.79
TPM3-206ENST00000330188 ABCA9Q8IUA7 1624 aa19.96■□□□□ 0.79
TPM3-206ENST00000330188 ZBED9Q6R2W3 1325 aa19.95■□□□□ 0.78
TPM3-206ENST00000330188 EIF2AK4Q9P2K8 1649 aaKnown RBP19.94■□□□□ 0.78
TPM3-206ENST00000330188 SPAG9O60271 1321 aaKnown RBP19.94■□□□□ 0.78
TPM3-206ENST00000330188 PRDM15P57071 1507 aaPredicted RBP19.93■□□□□ 0.78
TPM3-206ENST00000330188 DEPDC5O75140 1603 aa19.92■□□□□ 0.78
TPM3-206ENST00000330188 NBPF1Q3BBV0 1214 aa19.91■□□□□ 0.78
TPM3-206ENST00000330188 AFAP1Q8N556 730 aa19.91■□□□□ 0.78
TPM3-206ENST00000330188 INO80Q9ULG1 1556 aaPredicted RBP19.9■□□□□ 0.78
TPM3-206ENST00000330188 CNGB1Q14028 1251 aaPredicted RBP19.9■□□□□ 0.78
TPM3-206ENST00000330188 FANCAO15360 1455 aa19.9■□□□□ 0.78
TPM3-206ENST00000330188 RNF17Q9BXT8 1623 aaKnown RBP19.88■□□□□ 0.77
TPM3-206ENST00000330188 ATP7AQ04656 1500 aa19.88■□□□□ 0.77
TPM3-206ENST00000330188 TRPM2O94759 1503 aa19.86■□□□□ 0.77
TPM3-206ENST00000330188 SPHKAPQ2M3C7 1700 aa19.86■□□□□ 0.77
TPM3-206ENST00000330188 CEP152O94986 1710 aa19.85■□□□□ 0.77
TPM3-206ENST00000330188 COL17A1Q9UMD9 1497 aaPredicted RBP19.85■□□□□ 0.77
TPM3-206ENST00000330188 TET3O43151 1660 aa19.85■□□□□ 0.77
TPM3-206ENST00000330188 KTN1Q86UP2 1357 aaKnown RBP19.85■□□□□ 0.77
TPM3-206ENST00000330188 VWDEQ8N2E2 1590 aa19.83■□□□□ 0.77
TPM3-206ENST00000330188 ASXL2Q76L83 1435 aa19.83■□□□□ 0.77
TPM3-206ENST00000330188 ADGRL1O94910 1474 aa19.83■□□□□ 0.76
TPM3-206ENST00000330188 PTPRTO14522 1441 aa19.83■□□□□ 0.76
TPM3-206ENST00000330188 MADDQ8WXG6 1647 aa19.82■□□□□ 0.76
TPM3-206ENST00000330188 CLTCL1P53675 1640 aa19.82■□□□□ 0.76
TPM3-206ENST00000330188 IRX6P78412 446 aaPredicted RBP19.82■□□□□ 0.76
TPM3-206ENST00000330188 PNISRQ8TF01 805 aaKnown RBP19.81■□□□□ 0.76
TPM3-206ENST00000330188 TESK2Q96S53 571 aa19.81■□□□□ 0.76
TPM3-206ENST00000330188 RALBP1Q15311 655 aa19.81■□□□□ 0.76
TPM3-206ENST00000330188 SCAPERQ9BY12 1400 aa19.8■□□□□ 0.76
TPM3-206ENST00000330188 MYBBP1AQ9BQG0 1328 aaKnown RBP19.8■□□□□ 0.76
TPM3-206ENST00000330188 BRD4O60885 1362 aaPredicted RBP19.8■□□□□ 0.76
TPM3-206ENST00000330188 ERICH6BQ5W0A0 696 aa19.79■□□□□ 0.76
TPM3-206ENST00000330188 DISP3Q9P2K9 1392 aa19.79■□□□□ 0.76
TPM3-206ENST00000330188 TMC1Q8TDI8 760 aa19.79■□□□□ 0.76
TPM3-206ENST00000330188 MROH1Q8NDA8 1641 aa19.78■□□□□ 0.76
TPM3-206ENST00000330188 SMG6Q86US8 1419 aaKnown RBP19.77■□□□□ 0.76
TPM3-206ENST00000330188 IQGAP1P46940 1657 aa19.77■□□□□ 0.76
TPM3-206ENST00000330188 LRPPRCP42704 1394 aaKnown RBP19.77■□□□□ 0.76
TPM3-206ENST00000330188 KANK1Q14678 1352 aa19.76■□□□□ 0.75
TPM3-206ENST00000330188 PARD3Q8TEW0 1356 aa19.76■□□□□ 0.75
TPM3-206ENST00000330188 KIDINS220Q9ULH0 1771 aa19.75■□□□□ 0.75
TPM3-206ENST00000330188 PER1O15534 1290 aaPredicted RBP19.75■□□□□ 0.75
TPM3-206ENST00000330188 KIF3BO15066 747 aa19.73■□□□□ 0.75
TPM3-206ENST00000330188 NEURL4Q96JN8 1562 aa19.72■□□□□ 0.75
TPM3-206ENST00000330188 TMF1P82094 1093 aa19.72■□□□□ 0.75
TPM3-206ENST00000330188 PHF23Q9BUL5 403 aaPredicted RBP19.72■□□□□ 0.75
TPM3-206ENST00000330188 STAC3Q96MF2 364 aa19.71■□□□□ 0.75
TPM3-206ENST00000330188 MYT1LQ9UL68 1186 aa19.71■□□□□ 0.75
TPM3-206ENST00000330188 NUDCQ9Y266 331 aa19.71■□□□□ 0.75
TPM3-206ENST00000330188 PPP4R2Q9NY27 417 aa19.7■□□□□ 0.74
TPM3-206ENST00000330188 NLRP13Q86W25 1043 aa19.69■□□□□ 0.74
TPM3-206ENST00000330188 WASHC2CQ9Y4E1 1318 aa19.69■□□□□ 0.74
TPM3-206ENST00000330188 ZNF518AQ6AHZ1 1483 aa19.69■□□□□ 0.74
TPM3-206ENST00000330188 KIAA1210Q9ULL0 1709 aa19.69■□□□□ 0.74
TPM3-206ENST00000330188 EFCAB6Q5THR3 1501 aa19.68■□□□□ 0.74
TPM3-206ENST00000330188 CFAP74Q9C0B2 1584 aa19.68■□□□□ 0.74
TPM3-206ENST00000330188 OSCARQ8IYS5 282 aa19.67■□□□□ 0.74
TPM3-206ENST00000330188 PANK3Q9H999 370 aa19.67■□□□□ 0.74
TPM3-206ENST00000330188 SCAF11Q99590 1463 aaKnown RBP19.67■□□□□ 0.74
TPM3-206ENST00000330188 PPRC1Q5VV67 1664 aaKnown RBP19.66■□□□□ 0.74
TPM3-206ENST00000330188 KIF1BO60333 1816 aa19.66■□□□□ 0.74
TPM3-206ENST00000330188 UGGT1Q9NYU2 1555 aa19.65■□□□□ 0.74
TPM3-206ENST00000330188 NPM1P06748 294 aaKnown RBP eCLIP19.65■□□□□ 0.74
TPM3-206ENST00000330188 LMTK2Q8IWU2 1503 aa19.65■□□□□ 0.74
TPM3-206ENST00000330188 RNF123Q5XPI4 1314 aa19.64■□□□□ 0.73
TPM3-206ENST00000330188 MAP3K4Q9Y6R4 1608 aa19.64■□□□□ 0.73
TPM3-206ENST00000330188 IFT172Q9UG01 1749 aa19.63■□□□□ 0.73
TPM3-206ENST00000330188 CD109Q6YHK3 1445 aa19.63■□□□□ 0.73
TPM3-206ENST00000330188 SENP3-EIF4A1A0A087X0R7 540 aa19.63■□□□□ 0.73
TPM3-206ENST00000330188 MYOM2P54296 1465 aa19.63■□□□□ 0.73
TPM3-206ENST00000330188 POGZQ7Z3K3 1410 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms