RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 PTPN23Q9H3S7 1636 aa23.06■■□□□ 1.28
TSPO-201ENST00000329563 FAM135AQ9P2D6 1515 aa23.05■■□□□ 1.28
TSPO-201ENST00000329563 KDM5DQ9BY66 1539 aa23.04■■□□□ 1.28
TSPO-201ENST00000329563 CROCC2H7BZ55 1655 aa23.04■■□□□ 1.28
TSPO-201ENST00000329563 CEP170BQ9Y4F5 1589 aaPredicted RBP23.03■■□□□ 1.28
TSPO-201ENST00000329563 RNF17Q9BXT8 1623 aaKnown RBP23.02■■□□□ 1.28
TSPO-201ENST00000329563 APLP2Q06481 763 aa23.02■■□□□ 1.28
TSPO-201ENST00000329563 ABCC5O15440 1437 aa23.01■■□□□ 1.27
TSPO-201ENST00000329563 PLA2R1Q13018 1463 aa23.01■■□□□ 1.27
TSPO-201ENST00000329563 MROH1Q8NDA8 1641 aa23■■□□□ 1.27
TSPO-201ENST00000329563 FGD6Q6ZV73 1430 aa23■■□□□ 1.27
TSPO-201ENST00000329563 TCOF1Q13428 1488 aaKnown RBP22.99■■□□□ 1.27
TSPO-201ENST00000329563 IQSEC2Q5JU85 1478 aa22.99■■□□□ 1.27
TSPO-201ENST00000329563 EIF2AK4Q9P2K8 1649 aaKnown RBP22.99■■□□□ 1.27
TSPO-201ENST00000329563 DNMT1P26358 1616 aaKnown RBP22.98■■□□□ 1.27
TSPO-201ENST00000329563 PKD2Q13563 968 aa22.97■■□□□ 1.27
TSPO-201ENST00000329563 FBXO31Q5XUX0 539 aaPredicted RBP22.97■■□□□ 1.27
TSPO-201ENST00000329563 PZPP20742 1482 aa22.97■■□□□ 1.27
TSPO-201ENST00000329563 SHANK2Q9UPX8 1470 aa22.97■■□□□ 1.27
TSPO-201ENST00000329563 DAPK1P53355 1430 aa22.96■■□□□ 1.27
TSPO-201ENST00000329563 LTBP4Q8N2S1 1624 aa22.96■■□□□ 1.27
TSPO-201ENST00000329563 WASHC2CQ9Y4E1 1318 aa22.95■■□□□ 1.26
TSPO-201ENST00000329563 ABCC3O15438 1527 aa22.94■■□□□ 1.26
TSPO-201ENST00000329563 DUOX2Q9NRD8 1548 aa22.94■■□□□ 1.26
TSPO-201ENST00000329563 A2ML1A8K2U0 1454 aa22.94■■□□□ 1.26
TSPO-201ENST00000329563 ZC3H13Q5T200 1668 aaKnown RBP22.92■■□□□ 1.26
TSPO-201ENST00000329563 NCKAP5LQ9HCH0 1330 aa22.91■■□□□ 1.26
TSPO-201ENST00000329563 CEP152O94986 1710 aa22.91■■□□□ 1.26
TSPO-201ENST00000329563 TNRQ92752 1358 aa22.9■■□□□ 1.26
TSPO-201ENST00000329563 KIF15Q9NS87 1388 aa22.9■■□□□ 1.26
TSPO-201ENST00000329563 POLR1AO95602 1720 aaPredicted RBP22.88■■□□□ 1.25
TSPO-201ENST00000329563 RRP7BPQ9NSQ0 103 aa22.87■■□□□ 1.25
TSPO-201ENST00000329563 PRDM15P57071 1507 aaPredicted RBP22.87■■□□□ 1.25
TSPO-201ENST00000329563 ERBINQ96RT1 1412 aa22.86■■□□□ 1.25
TSPO-201ENST00000329563 SPATA31D1Q6ZQQ2 1576 aa22.85■■□□□ 1.25
TSPO-201ENST00000329563 DEPDC5O75140 1603 aa22.85■■□□□ 1.25
TSPO-201ENST00000329563 NLRP1Q9C000 1473 aa22.84■■□□□ 1.25
TSPO-201ENST00000329563 CHIC2Q9UKJ5 165 aa22.83■■□□□ 1.25
TSPO-201ENST00000329563 NEURL4Q96JN8 1562 aa22.82■■□□□ 1.24
TSPO-201ENST00000329563 ZNF335Q9H4Z2 1342 aaPredicted RBP22.82■■□□□ 1.24
TSPO-201ENST00000329563 ERVK-7P63135 1459 aa22.81■■□□□ 1.24
TSPO-201ENST00000329563 ADGRL2O95490 1459 aa22.79■■□□□ 1.24
TSPO-201ENST00000329563 THEMISQ8N1K5 641 aaPredicted RBP22.78■■□□□ 1.24
TSPO-201ENST00000329563 UGGT1Q9NYU2 1555 aa22.78■■□□□ 1.24
TSPO-201ENST00000329563 ANKRD30AQ9BXX3 1397 aa22.77■■□□□ 1.24
TSPO-201ENST00000329563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.76■■□□□ 1.23
TSPO-201ENST00000329563 FAM50AQ14320 339 aaKnown RBP22.76■■□□□ 1.23
TSPO-201ENST00000329563 ANKLE2Q86XL3 938 aa22.76■■□□□ 1.23
TSPO-201ENST00000329563 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
TSPO-201ENST00000329563 CFAP65Q6ZU64 1925 aaKnown RBP22.74■■□□□ 1.23
TSPO-201ENST00000329563 CPS1P31327 1500 aa22.74■■□□□ 1.23
TSPO-201ENST00000329563 DISP3Q9P2K9 1392 aa22.74■■□□□ 1.23
TSPO-201ENST00000329563 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
TSPO-201ENST00000329563 UBAP1LF5GYI3 381 aa22.73■■□□□ 1.23
TSPO-201ENST00000329563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.73■■□□□ 1.23
TSPO-201ENST00000329563 UBR1Q8IWV7 1749 aa22.71■■□□□ 1.23
TSPO-201ENST00000329563 PPARGC1BQ86YN6 1023 aaKnown RBP22.71■■□□□ 1.23
TSPO-201ENST00000329563 LMTK2Q8IWU2 1503 aa22.71■■□□□ 1.23
TSPO-201ENST00000329563 MED14O60244 1454 aa22.68■■□□□ 1.22
TSPO-201ENST00000329563 IQGAP1P46940 1657 aa22.68■■□□□ 1.22
TSPO-201ENST00000329563 NPHP4O75161 1426 aaPredicted RBP22.66■■□□□ 1.22
TSPO-201ENST00000329563 ANKRD50Q9ULJ7 1429 aa22.65■■□□□ 1.22
TSPO-201ENST00000329563 PIK3C2BO00750 1634 aa22.65■■□□□ 1.22
TSPO-201ENST00000329563 EFCAB6Q5THR3 1501 aa22.65■■□□□ 1.22
TSPO-201ENST00000329563 KANK1Q14678 1352 aa22.64■■□□□ 1.22
TSPO-201ENST00000329563 SYNMO15061 1565 aa22.64■■□□□ 1.22
TSPO-201ENST00000329563 TOM1O60784 492 aa22.62■■□□□ 1.21
TSPO-201ENST00000329563 ARHGAP23Q9P227 1491 aa22.6■■□□□ 1.21
TSPO-201ENST00000329563 UNC13BO14795 1591 aa22.6■■□□□ 1.21
TSPO-201ENST00000329563 SLIT1O75093 1534 aa22.59■■□□□ 1.21
TSPO-201ENST00000329563 STRCP1A6NGW2 1772 aa22.58■■□□□ 1.21
TSPO-201ENST00000329563 NOS1P29475 1434 aa22.58■■□□□ 1.21
TSPO-201ENST00000329563 ROCK1Q13464 1354 aa22.58■■□□□ 1.21
TSPO-201ENST00000329563 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
TSPO-201ENST00000329563 TET3O43151 1660 aa22.56■■□□□ 1.2
TSPO-201ENST00000329563 LTKP29376 864 aa22.56■■□□□ 1.2
TSPO-201ENST00000329563 SCAF11Q99590 1463 aaKnown RBP22.55■■□□□ 1.2
TSPO-201ENST00000329563 KDM5AP29375 1690 aaKnown RBP22.55■■□□□ 1.2
TSPO-201ENST00000329563 IDI1Q13907 227 aa22.54■■□□□ 1.2
TSPO-201ENST00000329563 GCC2Q8IWJ2 1684 aa22.53■■□□□ 1.2
TSPO-201ENST00000329563 ITGAEP38570 1179 aa22.52■■□□□ 1.2
TSPO-201ENST00000329563 EID1Q9Y6B2 187 aa22.52■■□□□ 1.2
TSPO-201ENST00000329563 PIP4K2BP78356 416 aa22.51■■□□□ 1.19
TSPO-201ENST00000329563 RPRD2Q5VT52 1461 aaKnown RBP22.51■■□□□ 1.19
TSPO-201ENST00000329563 E9PCH4 1651 aa22.51■■□□□ 1.19
TSPO-201ENST00000329563 TMEM2Q9UHN6 1383 aa22.5■■□□□ 1.19
TSPO-201ENST00000329563 STAG3Q9UJ98 1225 aa22.5■■□□□ 1.19
TSPO-201ENST00000329563 ADGRB3O60242 1522 aa22.5■■□□□ 1.19
TSPO-201ENST00000329563 IQGAP3Q86VI3 1631 aa22.49■■□□□ 1.19
TSPO-201ENST00000329563 ILDR2Q71H61 639 aa22.49■■□□□ 1.19
TSPO-201ENST00000329563 TXNDC2Q86VQ3 553 aa22.49■■□□□ 1.19
TSPO-201ENST00000329563 RRBP1Q9P2E9 1410 aaKnown RBP22.48■■□□□ 1.19
TSPO-201ENST00000329563 SOCS7O14512 581 aa22.48■■□□□ 1.19
TSPO-201ENST00000329563 ALKQ9UM73 1620 aa22.48■■□□□ 1.19
TSPO-201ENST00000329563 MYO5BQ9ULV0 1848 aa22.45■■□□□ 1.19
TSPO-201ENST00000329563 LRRC7Q96NW7 1537 aa22.45■■□□□ 1.18
TSPO-201ENST00000329563 HSPA1LP34931 641 aa22.44■■□□□ 1.18
TSPO-201ENST00000329563 TMEM131LA2VDJ0 1609 aa22.42■■□□□ 1.18
TSPO-201ENST00000329563 SLC52A1Q9NWF4 448 aa22.42■■□□□ 1.18
TSPO-201ENST00000329563 XIRP1Q702N8 1843 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms