RNA–Protein interactions for RNA: ENST00000329255.3

ALX4-201, Transcript of ALX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX4, Length 5,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4-201ENST00000329255 CHMP4CQ96CF2 233 aa16.84■□□□□ 0.29
ALX4-201ENST00000329255 DDX49Q9Y6V7 483 aaKnown RBP16.83■□□□□ 0.29
ALX4-201ENST00000329255 GOLGA6L19H0YKK7 550 aa16.83■□□□□ 0.29
ALX4-201ENST00000329255 GPS2Q13227 327 aa16.83■□□□□ 0.29
ALX4-201ENST00000329255 TSR1Q2NL82 804 aaKnown RBP16.83■□□□□ 0.29
ALX4-201ENST00000329255 RAB3GAP2Q9H2M9 1393 aa16.83■□□□□ 0.28
ALX4-201ENST00000329255 CENPQQ7L2Z9 268 aaPredicted RBP16.83■□□□□ 0.28
ALX4-201ENST00000329255 CCDC146Q8IYE0 955 aa16.83■□□□□ 0.28
ALX4-201ENST00000329255 ERCC6Q03468 1493 aa16.82■□□□□ 0.28
ALX4-201ENST00000329255 H3BQV1 296 aa16.82■□□□□ 0.28
ALX4-201ENST00000329255 TPD52L1Q16890 204 aaPredicted RBP16.82■□□□□ 0.28
ALX4-201ENST00000329255 IFFO2Q5TF58 517 aa16.82■□□□□ 0.28
ALX4-201ENST00000329255 FOXD4L5Q5VV16 416 aaPredicted RBP16.82■□□□□ 0.28
ALX4-201ENST00000329255 VSIG10Q8N0Z9 540 aa16.82■□□□□ 0.28
ALX4-201ENST00000329255 FOXD4L4Q8WXT5 416 aaPredicted RBP16.82■□□□□ 0.28
ALX4-201ENST00000329255 NUP155O75694 1391 aa16.82■□□□□ 0.28
ALX4-201ENST00000329255 FAM161AQ3B820 660 aa16.82■□□□□ 0.28
ALX4-201ENST00000329255 GSE1Q14687 1217 aa16.81■□□□□ 0.28
ALX4-201ENST00000329255 TOMM22Q9NS69 142 aa16.81■□□□□ 0.28
ALX4-201ENST00000329255 NACADO15069 1562 aa16.8■□□□□ 0.28
ALX4-201ENST00000329255 BECN2A8MW95 431 aa16.8■□□□□ 0.28
ALX4-201ENST00000329255 MARCH6O60337 910 aa16.8■□□□□ 0.28
ALX4-201ENST00000329255 TPM1P09493 284 aa16.8■□□□□ 0.28
ALX4-201ENST00000329255 CCDC70Q6NSX1 233 aa16.8■□□□□ 0.28
ALX4-201ENST00000329255 ANKRD30AQ9BXX3 1397 aa16.8■□□□□ 0.28
ALX4-201ENST00000329255 PES1O00541 588 aaKnown RBP16.8■□□□□ 0.28
ALX4-201ENST00000329255 CUX2O14529 1486 aa16.8■□□□□ 0.28
ALX4-201ENST00000329255 FAM184AQ8NB25 1140 aa16.79■□□□□ 0.28
ALX4-201ENST00000329255 TPM2P07951 284 aa16.78■□□□□ 0.28
ALX4-201ENST00000329255 CCAR2Q8N163 923 aaKnown RBP16.78■□□□□ 0.28
ALX4-201ENST00000329255 PDE4AP27815 886 aa16.77■□□□□ 0.28
ALX4-201ENST00000329255 FMN1Q68DA7 1419 aa16.77■□□□□ 0.28
ALX4-201ENST00000329255 KIF15Q9NS87 1388 aa16.77■□□□□ 0.27
ALX4-201ENST00000329255 RILPL2Q969X0 211 aa16.75■□□□□ 0.27
ALX4-201ENST00000329255 MYBBP1AQ9BQG0 1328 aaKnown RBP16.75■□□□□ 0.27
ALX4-201ENST00000329255 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
ALX4-201ENST00000329255 ZNF771Q7L3S4 317 aaPredicted RBP16.74■□□□□ 0.27
ALX4-201ENST00000329255 VPS53Q5VIR6 699 aa16.74■□□□□ 0.27
ALX4-201ENST00000329255 SOGA1O94964 1423 aa16.74■□□□□ 0.27
ALX4-201ENST00000329255 G3V3G9 751 aa16.74■□□□□ 0.27
ALX4-201ENST00000329255 DCAF8Q5TAQ9 597 aa16.74■□□□□ 0.27
ALX4-201ENST00000329255 FRAT2O75474 233 aaPredicted RBP16.73■□□□□ 0.27
ALX4-201ENST00000329255 AKAP17AQ02040 695 aaKnown RBP16.73■□□□□ 0.27
ALX4-201ENST00000329255 ANKRD45Q5TZF3 282 aa16.73■□□□□ 0.27
ALX4-201ENST00000329255 AMPHP49418 695 aa16.72■□□□□ 0.27
ALX4-201ENST00000329255 L3MBTL2Q969R5 705 aa16.72■□□□□ 0.27
ALX4-201ENST00000329255 CARMIL2Q6F5E8 1435 aa16.72■□□□□ 0.27
ALX4-201ENST00000329255 CALRP27797 417 aaKnown RBP16.71■□□□□ 0.27
ALX4-201ENST00000329255 ZKSCAN2Q63HK3 967 aa16.71■□□□□ 0.27
ALX4-201ENST00000329255 EFCAB2Q5VUJ9 269 aa16.7■□□□□ 0.26
ALX4-201ENST00000329255 TEX35Q5T0J7 233 aa16.7■□□□□ 0.26
ALX4-201ENST00000329255 ZNF592Q92610 1267 aa16.7■□□□□ 0.26
ALX4-201ENST00000329255 SLC4A3P48751 1232 aa16.7■□□□□ 0.26
ALX4-201ENST00000329255 IPO7O95373 1038 aaKnown RBP16.7■□□□□ 0.26
ALX4-201ENST00000329255 E9PSI1 815 aa16.69■□□□□ 0.26
ALX4-201ENST00000329255 SYNE3Q6ZMZ3 975 aa16.69■□□□□ 0.26
ALX4-201ENST00000329255 CGNL1Q0VF96 1302 aa16.69■□□□□ 0.26
ALX4-201ENST00000329255 RRP1P56182 461 aaKnown RBP16.69■□□□□ 0.26
ALX4-201ENST00000329255 CPLX2Q6PUV4 134 aaKnown RBP16.69■□□□□ 0.26
ALX4-201ENST00000329255 NGDNQ8NEJ9 315 aaKnown RBP16.69■□□□□ 0.26
ALX4-201ENST00000329255 REC8O95072 547 aa16.68■□□□□ 0.26
ALX4-201ENST00000329255 LRRFIP1Q32MZ4 808 aaKnown RBP16.68■□□□□ 0.26
ALX4-201ENST00000329255 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
ALX4-201ENST00000329255 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
ALX4-201ENST00000329255 RUFY2Q8WXA3 655 aa16.68■□□□□ 0.26
ALX4-201ENST00000329255 DIAPH3Q9NSV4 1193 aa16.68■□□□□ 0.26
ALX4-201ENST00000329255 MCTP1Q6DN14 999 aa16.68■□□□□ 0.26
ALX4-201ENST00000329255 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
ALX4-201ENST00000329255 ANKRD20A12PQ8NF67 263 aa16.67■□□□□ 0.26
ALX4-201ENST00000329255 RRP7AQ9Y3A4 280 aaKnown RBP16.67■□□□□ 0.26
ALX4-201ENST00000329255 GTF2E1P29083 439 aaPredicted RBP16.66■□□□□ 0.26
ALX4-201ENST00000329255 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.66■□□□□ 0.26
ALX4-201ENST00000329255 EXOC6Q8TAG9 804 aa16.66■□□□□ 0.26
ALX4-201ENST00000329255 CCDC47Q96A33 483 aaKnown RBP16.66■□□□□ 0.26
ALX4-201ENST00000329255 TRIM29Q14134 588 aa16.66■□□□□ 0.26
ALX4-201ENST00000329255 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
ALX4-201ENST00000329255 FANCIQ9NVI1 1328 aa16.65■□□□□ 0.26
ALX4-201ENST00000329255 TRHP20396 242 aaPredicted RBP16.65■□□□□ 0.26
ALX4-201ENST00000329255 CRBNQ96SW2 442 aa16.65■□□□□ 0.26
ALX4-201ENST00000329255 CHMP5Q9NZZ3 219 aa16.65■□□□□ 0.26
ALX4-201ENST00000329255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.65■□□□□ 0.26
ALX4-201ENST00000329255 CCDC9Q9Y3X0 531 aaKnown RBP16.65■□□□□ 0.26
ALX4-201ENST00000329255 PATL2C9JE40 543 aaKnown RBP16.64■□□□□ 0.25
ALX4-201ENST00000329255 PCMTD1Q96MG8 357 aaPredicted RBP16.64■□□□□ 0.25
ALX4-201ENST00000329255 ZBED9Q6R2W3 1325 aa16.64■□□□□ 0.25
ALX4-201ENST00000329255 HOMER1Q86YM7 354 aa16.64■□□□□ 0.25
ALX4-201ENST00000329255 HOOK1Q9UJC3 728 aaKnown RBP16.64■□□□□ 0.25
ALX4-201ENST00000329255 KIF3BO15066 747 aa16.64■□□□□ 0.25
ALX4-201ENST00000329255 LTV1Q96GA3 475 aaPredicted RBP16.63■□□□□ 0.25
ALX4-201ENST00000329255 BCL2L13Q9BXK5 485 aa16.63■□□□□ 0.25
ALX4-201ENST00000329255 PLIN1O60240 522 aa16.63■□□□□ 0.25
ALX4-201ENST00000329255 EID1Q9Y6B2 187 aa16.63■□□□□ 0.25
ALX4-201ENST00000329255 FAM13BQ9NYF5 915 aa16.62■□□□□ 0.25
ALX4-201ENST00000329255 PANK3Q9H999 370 aa16.62■□□□□ 0.25
ALX4-201ENST00000329255 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
ALX4-201ENST00000329255 COG6Q9Y2V7 657 aa16.61■□□□□ 0.25
ALX4-201ENST00000329255 BICD2Q8TD16 824 aa16.61■□□□□ 0.25
ALX4-201ENST00000329255 ANO2Q9NQ90 1003 aa16.61■□□□□ 0.25
ALX4-201ENST00000329255 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
ALX4-201ENST00000329255 RSPH4AQ5TD94 716 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms