RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 NEO1Q92859 1461 aa21.13■□□□□ 0.97
TPM3-205ENST00000328159 HSPA5P11021 654 aaKnown RBP21.13■□□□□ 0.97
TPM3-205ENST00000328159 MAP3K4Q9Y6R4 1608 aa21.12■□□□□ 0.97
TPM3-205ENST00000328159 PLA2R1Q13018 1463 aa21.12■□□□□ 0.97
TPM3-205ENST00000328159 GLI2P10070 1586 aa21.12■□□□□ 0.97
TPM3-205ENST00000328159 EIF4G2P78344 907 aaKnown RBP eCLIP21.12■□□□□ 0.97
TPM3-205ENST00000328159 DHX29Q7Z478 1369 aaKnown RBP21.11■□□□□ 0.97
TPM3-205ENST00000328159 CCDC144AA2RUR9 1427 aa21.11■□□□□ 0.97
TPM3-205ENST00000328159 DDX10Q13206 875 aaKnown RBP21.11■□□□□ 0.97
TPM3-205ENST00000328159 ATP10AO60312 1499 aa21.1■□□□□ 0.97
TPM3-205ENST00000328159 UHRF1BP1Q6BDS2 1440 aa21.09■□□□□ 0.97
TPM3-205ENST00000328159 MLH3Q9UHC1 1453 aa21.07■□□□□ 0.96
TPM3-205ENST00000328159 VWDEQ8N2E2 1590 aa21.07■□□□□ 0.96
TPM3-205ENST00000328159 HECW2Q9P2P5 1572 aa21.07■□□□□ 0.96
TPM3-205ENST00000328159 E9PCH4 1651 aa21.07■□□□□ 0.96
TPM3-205ENST00000328159 TET3O43151 1660 aa21.06■□□□□ 0.96
TPM3-205ENST00000328159 KANK1Q14678 1352 aa21.05■□□□□ 0.96
TPM3-205ENST00000328159 MROH1Q8NDA8 1641 aa21.05■□□□□ 0.96
TPM3-205ENST00000328159 PRDM15P57071 1507 aaPredicted RBP21.05■□□□□ 0.96
TPM3-205ENST00000328159 KIF3BO15066 747 aa21.05■□□□□ 0.96
TPM3-205ENST00000328159 A2MP01023 1474 aa21.04■□□□□ 0.96
TPM3-205ENST00000328159 DIP2BQ9P265 1576 aa21.03■□□□□ 0.96
TPM3-205ENST00000328159 ZNF326Q5BKZ1 582 aaKnown RBP21.02■□□□□ 0.96
TPM3-205ENST00000328159 RALGAPBQ86X10 1494 aa21.02■□□□□ 0.96
TPM3-205ENST00000328159 SPATA31E1Q6ZUB1 1445 aa21.01■□□□□ 0.95
TPM3-205ENST00000328159 DCAF11Q8TEB1 546 aa21■□□□□ 0.95
TPM3-205ENST00000328159 ABCA6Q8N139 1617 aa21■□□□□ 0.95
TPM3-205ENST00000328159 RNF17Q9BXT8 1623 aaKnown RBP21■□□□□ 0.95
TPM3-205ENST00000328159 SPHKAPQ2M3C7 1700 aa21■□□□□ 0.95
TPM3-205ENST00000328159 RICTORQ6R327 1708 aa21■□□□□ 0.95
TPM3-205ENST00000328159 FRMPD1Q5SYB0 1578 aa20.99■□□□□ 0.95
TPM3-205ENST00000328159 TRPM2O94759 1503 aa20.98■□□□□ 0.95
TPM3-205ENST00000328159 CENPBP07199 599 aaPredicted RBP20.98■□□□□ 0.95
TPM3-205ENST00000328159 KDM2AQ9Y2K7 1162 aa20.98■□□□□ 0.95
TPM3-205ENST00000328159 PTPRTO14522 1441 aa20.97■□□□□ 0.95
TPM3-205ENST00000328159 WASHC2AQ641Q2 1341 aa20.97■□□□□ 0.95
TPM3-205ENST00000328159 FAM69CQ0P6D2 419 aa20.97■□□□□ 0.95
TPM3-205ENST00000328159 BCORL1Q5H9F3 1711 aa20.97■□□□□ 0.95
TPM3-205ENST00000328159 RAPGEF3O95398 923 aa20.96■□□□□ 0.95
TPM3-205ENST00000328159 YTHDC1Q96MU7 727 aaKnown RBP20.96■□□□□ 0.95
TPM3-205ENST00000328159 POLR1AO95602 1720 aaPredicted RBP20.96■□□□□ 0.95
TPM3-205ENST00000328159 RGL3Q3MIN7 710 aa20.94■□□□□ 0.94
TPM3-205ENST00000328159 LMTK2Q8IWU2 1503 aa20.94■□□□□ 0.94
TPM3-205ENST00000328159 USP47Q96K76 1375 aa20.93■□□□□ 0.94
TPM3-205ENST00000328159 CEP152O94986 1710 aa20.93■□□□□ 0.94
TPM3-205ENST00000328159 DIP2CQ9Y2E4 1556 aa20.93■□□□□ 0.94
TPM3-205ENST00000328159 PRAG1Q86YV5 1406 aa20.93■□□□□ 0.94
TPM3-205ENST00000328159 EFCAB6Q5THR3 1501 aa20.93■□□□□ 0.94
TPM3-205ENST00000328159 CCDC7Q96M83 1385 aa20.92■□□□□ 0.94
TPM3-205ENST00000328159 CLTCL1P53675 1640 aa20.92■□□□□ 0.94
TPM3-205ENST00000328159 TRPM1Q7Z4N2 1603 aa20.92■□□□□ 0.94
TPM3-205ENST00000328159 PPRC1Q5VV67 1664 aaKnown RBP20.91■□□□□ 0.94
TPM3-205ENST00000328159 TSPOAP1O95153 1857 aa20.91■□□□□ 0.94
TPM3-205ENST00000328159 C11orf95C9JLR9 678 aaPredicted RBP20.9■□□□□ 0.94
TPM3-205ENST00000328159 CARD11Q9BXL7 1154 aa20.9■□□□□ 0.94
TPM3-205ENST00000328159 ANP32CO43423 234 aa20.88■□□□□ 0.93
TPM3-205ENST00000328159 ZMYM4Q5VZL5 1548 aa20.86■□□□□ 0.93
TPM3-205ENST00000328159 ROCK2O75116 1388 aaKnown RBP20.86■□□□□ 0.93
TPM3-205ENST00000328159 CNTLNQ9NXG0 1405 aa20.85■□□□□ 0.93
TPM3-205ENST00000328159 KIF7Q2M1P5 1343 aa20.85■□□□□ 0.93
TPM3-205ENST00000328159 YEATS2Q9ULM3 1422 aa20.84■□□□□ 0.93
TPM3-205ENST00000328159 GGT6Q6P531 493 aa20.84■□□□□ 0.93
TPM3-205ENST00000328159 LAMC1P11047 1609 aa20.84■□□□□ 0.93
TPM3-205ENST00000328159 KIF13AQ9H1H9 1805 aa20.84■□□□□ 0.93
TPM3-205ENST00000328159 NEURL4Q96JN8 1562 aa20.83■□□□□ 0.93
TPM3-205ENST00000328159 GPRASP1Q5JY77 1395 aa20.82■□□□□ 0.92
TPM3-205ENST00000328159 ABCC3O15438 1527 aa20.82■□□□□ 0.92
TPM3-205ENST00000328159 CCER2I3L3R5 266 aa20.81■□□□□ 0.92
TPM3-205ENST00000328159 KIF1BO60333 1816 aa20.81■□□□□ 0.92
TPM3-205ENST00000328159 MADDQ8WXG6 1647 aa20.8■□□□□ 0.92
TPM3-205ENST00000328159 UGGT1Q9NYU2 1555 aa20.79■□□□□ 0.92
TPM3-205ENST00000328159 CAMSAP1Q5T5Y3 1602 aa20.79■□□□□ 0.92
TPM3-205ENST00000328159 ARID4BQ4LE39 1312 aaPredicted RBP20.78■□□□□ 0.92
TPM3-205ENST00000328159 STAC3Q96MF2 364 aa20.78■□□□□ 0.92
TPM3-205ENST00000328159 NPATQ14207 1427 aa20.78■□□□□ 0.92
TPM3-205ENST00000328159 WASHC2CQ9Y4E1 1318 aa20.78■□□□□ 0.92
TPM3-205ENST00000328159 NBPF1Q3BBV0 1214 aa20.77■□□□□ 0.92
TPM3-205ENST00000328159 ZC3H13Q5T200 1668 aaKnown RBP20.77■□□□□ 0.91
TPM3-205ENST00000328159 ST20-MTHFSA0A0A6YYL1 179 aa20.76■□□□□ 0.91
TPM3-205ENST00000328159 CFAP65Q6ZU64 1925 aaKnown RBP20.76■□□□□ 0.91
TPM3-205ENST00000328159 MROH2AA6NES4 1674 aa20.73■□□□□ 0.91
TPM3-205ENST00000328159 IFT172Q9UG01 1749 aa20.72■□□□□ 0.91
TPM3-205ENST00000328159 REREQ9P2R6 1566 aa20.72■□□□□ 0.91
TPM3-205ENST00000328159 ADGRB3O60242 1522 aa20.71■□□□□ 0.91
TPM3-205ENST00000328159 SIGLEC1Q9BZZ2 1709 aa20.71■□□□□ 0.91
TPM3-205ENST00000328159 KIAA1210Q9ULL0 1709 aa20.7■□□□□ 0.9
TPM3-205ENST00000328159 MYOM2P54296 1465 aa20.7■□□□□ 0.9
TPM3-205ENST00000328159 ARHGAP31Q2M1Z3 1444 aa20.69■□□□□ 0.9
TPM3-205ENST00000328159 NOS1P29475 1434 aa20.69■□□□□ 0.9
TPM3-205ENST00000328159 SCAF1Q9H7N4 1312 aaKnown RBP20.69■□□□□ 0.9
TPM3-205ENST00000328159 POLR3GLQ9BT43 218 aa20.68■□□□□ 0.9
TPM3-205ENST00000328159 IQGAP1P46940 1657 aa20.67■□□□□ 0.9
TPM3-205ENST00000328159 AGLP35573 1532 aa20.67■□□□□ 0.9
TPM3-205ENST00000328159 PIK3C2BO00750 1634 aa20.66■□□□□ 0.9
TPM3-205ENST00000328159 SYNMO15061 1565 aa20.65■□□□□ 0.9
TPM3-205ENST00000328159 COL17A1Q9UMD9 1497 aaPredicted RBP20.65■□□□□ 0.9
TPM3-205ENST00000328159 PRKRIP1Q9H875 184 aaPredicted RBP20.63■□□□□ 0.89
TPM3-205ENST00000328159 PPLO60437 1756 aa20.62■□□□□ 0.89
TPM3-205ENST00000328159 ARHGEF40Q8TER5 1519 aa20.62■□□□□ 0.89
TPM3-205ENST00000328159 CHGAP10645 457 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms