RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 IFFO2Q5TF58 517 aa20.35■□□□□ 0.85
SMAD3-201ENST00000327367 CRBNQ96SW2 442 aa20.35■□□□□ 0.85
SMAD3-201ENST00000327367 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
SMAD3-201ENST00000327367 CCDC9Q9Y3X0 531 aaKnown RBP20.34■□□□□ 0.85
SMAD3-201ENST00000327367 BCL2L13Q9BXK5 485 aa20.33■□□□□ 0.85
SMAD3-201ENST00000327367 RILPL2Q969X0 211 aa20.33■□□□□ 0.84
SMAD3-201ENST00000327367 CENPJQ9HC77 1338 aaPredicted RBP20.33■□□□□ 0.84
SMAD3-201ENST00000327367 CEP89Q96ST8 783 aa20.32■□□□□ 0.84
SMAD3-201ENST00000327367 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
SMAD3-201ENST00000327367 NFKBIBQ15653 356 aa20.3■□□□□ 0.84
SMAD3-201ENST00000327367 GORABQ5T7V8 394 aa20.3■□□□□ 0.84
SMAD3-201ENST00000327367 STK26Q9P289 416 aa20.3■□□□□ 0.84
SMAD3-201ENST00000327367 RRP7AQ9Y3A4 280 aaKnown RBP20.3■□□□□ 0.84
SMAD3-201ENST00000327367 IFT57Q9NWB7 429 aa20.29■□□□□ 0.84
SMAD3-201ENST00000327367 ANKRD45Q5TZF3 282 aa20.29■□□□□ 0.84
SMAD3-201ENST00000327367 CCDC34Q96HJ3 373 aa20.29■□□□□ 0.84
SMAD3-201ENST00000327367 TOMM22Q9NS69 142 aa20.29■□□□□ 0.84
SMAD3-201ENST00000327367 MCTP1Q6DN14 999 aa20.29■□□□□ 0.84
SMAD3-201ENST00000327367 CENPQQ7L2Z9 268 aaPredicted RBP20.29■□□□□ 0.84
SMAD3-201ENST00000327367 RALBP1Q15311 655 aa20.28■□□□□ 0.84
SMAD3-201ENST00000327367 GPATCH3Q96I76 525 aa20.28■□□□□ 0.84
SMAD3-201ENST00000327367 TSR1Q2NL82 804 aaKnown RBP20.28■□□□□ 0.84
SMAD3-201ENST00000327367 NOM1Q5C9Z4 860 aaKnown RBP20.28■□□□□ 0.84
SMAD3-201ENST00000327367 CCDC70Q6NSX1 233 aa20.27■□□□□ 0.84
SMAD3-201ENST00000327367 SKIDA1Q1XH10 827 aa20.25■□□□□ 0.83
SMAD3-201ENST00000327367 FAM184AQ8NB25 1140 aa20.25■□□□□ 0.83
SMAD3-201ENST00000327367 DHX37Q8IY37 1157 aaKnown RBP20.25■□□□□ 0.83
SMAD3-201ENST00000327367 RRP12Q5JTH9 1297 aaKnown RBP20.24■□□□□ 0.83
SMAD3-201ENST00000327367 TNIKQ9UKE5 1360 aa20.24■□□□□ 0.83
SMAD3-201ENST00000327367 RRP1P56182 461 aaKnown RBP20.24■□□□□ 0.83
SMAD3-201ENST00000327367 PCMTD1Q96MG8 357 aaPredicted RBP20.24■□□□□ 0.83
SMAD3-201ENST00000327367 VPS53Q5VIR6 699 aa20.23■□□□□ 0.83
SMAD3-201ENST00000327367 MAP7D2Q96T17 732 aa20.23■□□□□ 0.83
SMAD3-201ENST00000327367 PLCD4Q9BRC7 762 aa20.23■□□□□ 0.83
SMAD3-201ENST00000327367 ROCK2O75116 1388 aaKnown RBP20.23■□□□□ 0.83
SMAD3-201ENST00000327367 SETD5Q9C0A6 1442 aa20.22■□□□□ 0.83
SMAD3-201ENST00000327367 HMMRO75330 724 aa20.22■□□□□ 0.83
SMAD3-201ENST00000327367 FOSBP53539 338 aa20.22■□□□□ 0.83
SMAD3-201ENST00000327367 RNF214Q8ND24 703 aa20.22■□□□□ 0.83
SMAD3-201ENST00000327367 MNS1Q8NEH6 495 aa20.21■□□□□ 0.83
SMAD3-201ENST00000327367 COG6Q9Y2V7 657 aa20.2■□□□□ 0.82
SMAD3-201ENST00000327367 TPM1P09493 284 aa20.2■□□□□ 0.82
SMAD3-201ENST00000327367 STK31Q9BXU1 1019 aa20.2■□□□□ 0.82
SMAD3-201ENST00000327367 CHMP5Q9NZZ3 219 aa20.19■□□□□ 0.82
SMAD3-201ENST00000327367 MARCH6O60337 910 aa20.18■□□□□ 0.82
SMAD3-201ENST00000327367 ELL2O00472 640 aaPredicted RBP20.18■□□□□ 0.82
SMAD3-201ENST00000327367 NASPP49321 788 aaPredicted RBP20.18■□□□□ 0.82
SMAD3-201ENST00000327367 H0YHG0 523 aa20.18■□□□□ 0.82
SMAD3-201ENST00000327367 BICD2Q8TD16 824 aa20.17■□□□□ 0.82
SMAD3-201ENST00000327367 RUFY1Q96T51 708 aa20.17■□□□□ 0.82
SMAD3-201ENST00000327367 HSP90AB3PQ58FF7 597 aa20.17■□□□□ 0.82
SMAD3-201ENST00000327367 PKD2Q13563 968 aa20.16■□□□□ 0.82
SMAD3-201ENST00000327367 ARGLU1Q9NWB6 273 aaPredicted RBP20.16■□□□□ 0.82
SMAD3-201ENST00000327367 ATP6V1DQ9Y5K8 247 aa20.15■□□□□ 0.82
SMAD3-201ENST00000327367 AK7Q96M32 723 aa20.14■□□□□ 0.82
SMAD3-201ENST00000327367 EEA1Q15075 1411 aa20.14■□□□□ 0.81
SMAD3-201ENST00000327367 PAK3O75914 559 aaPredicted RBP20.14■□□□□ 0.81
SMAD3-201ENST00000327367 TPM2P07951 284 aa20.14■□□□□ 0.81
SMAD3-201ENST00000327367 TTLL5Q6EMB2 1281 aa20.14■□□□□ 0.81
SMAD3-201ENST00000327367 HDGFL2Q7Z4V5 671 aaPredicted RBP20.14■□□□□ 0.81
SMAD3-201ENST00000327367 MPNDQ8N594 471 aa20.14■□□□□ 0.81
SMAD3-201ENST00000327367 RDXP35241 583 aaKnown RBP20.13■□□□□ 0.81
SMAD3-201ENST00000327367 CCDC39Q9UFE4 941 aa20.13■□□□□ 0.81
SMAD3-201ENST00000327367 CCDC66A2RUB6 948 aa20.12■□□□□ 0.81
SMAD3-201ENST00000327367 HSP90B2PQ58FF3 399 aa20.12■□□□□ 0.81
SMAD3-201ENST00000327367 RAB3GAP2Q9H2M9 1393 aa20.12■□□□□ 0.81
SMAD3-201ENST00000327367 VPS37CA5D8V6 355 aaPredicted RBP20.11■□□□□ 0.81
SMAD3-201ENST00000327367 MRE11P49959 708 aa20.11■□□□□ 0.81
SMAD3-201ENST00000327367 KIF3AQ9Y496 699 aa20.11■□□□□ 0.81
SMAD3-201ENST00000327367 ANO2Q9NQ90 1003 aa20.11■□□□□ 0.81
SMAD3-201ENST00000327367 NAP1L1P55209 391 aaKnown RBP20.11■□□□□ 0.81
SMAD3-201ENST00000327367 CWC15Q9P013 229 aaKnown RBP20.11■□□□□ 0.81
SMAD3-201ENST00000327367 PDE3BQ13370 1112 aa20.1■□□□□ 0.81
SMAD3-201ENST00000327367 SASS6Q6UVJ0 657 aa20.1■□□□□ 0.81
SMAD3-201ENST00000327367 FRAT2O75474 233 aaPredicted RBP20.1■□□□□ 0.81
SMAD3-201ENST00000327367 DIAPH3Q9NSV4 1193 aa20.09■□□□□ 0.81
SMAD3-201ENST00000327367 KANK4Q5T7N3 995 aaPredicted RBP20.09■□□□□ 0.81
SMAD3-201ENST00000327367 CEP164Q9UPV0 1460 aa20.08■□□□□ 0.81
SMAD3-201ENST00000327367 PDILTQ8N807 584 aa20.08■□□□□ 0.81
SMAD3-201ENST00000327367 PRDM10Q9NQV6 1147 aa20.08■□□□□ 0.8
SMAD3-201ENST00000327367 IPO7O95373 1038 aaKnown RBP20.08■□□□□ 0.8
SMAD3-201ENST00000327367 SPAG9O60271 1321 aaKnown RBP20.07■□□□□ 0.8
SMAD3-201ENST00000327367 NLRP13Q86W25 1043 aa20.07■□□□□ 0.8
SMAD3-201ENST00000327367 TRAK2O60296 914 aa20.07■□□□□ 0.8
SMAD3-201ENST00000327367 CAVIN1Q6NZI2 390 aaKnown RBP20.07■□□□□ 0.8
SMAD3-201ENST00000327367 ERICH4A6NGS2 130 aa20.06■□□□□ 0.8
SMAD3-201ENST00000327367 MTERF4Q7Z6M4 381 aaKnown RBP20.05■□□□□ 0.8
SMAD3-201ENST00000327367 ACBD3Q9H3P7 528 aa20.05■□□□□ 0.8
SMAD3-201ENST00000327367 SPC24Q8NBT2 197 aa20.05■□□□□ 0.8
SMAD3-201ENST00000327367 MPHOSPH9Q99550 1183 aa20.04■□□□□ 0.8
SMAD3-201ENST00000327367 MLECQ14165 292 aa20.04■□□□□ 0.8
SMAD3-201ENST00000327367 TSPYL1Q9H0U9 437 aa20.04■□□□□ 0.8
SMAD3-201ENST00000327367 CCDC191Q8NCU4 936 aa20.03■□□□□ 0.8
SMAD3-201ENST00000327367 UQCRHLA0A096LP55 91 aa20.02■□□□□ 0.8
SMAD3-201ENST00000327367 UQCRHP07919 91 aa20.02■□□□□ 0.8
SMAD3-201ENST00000327367 CSB-PGBD3P0DP91 1061 aa20.02■□□□□ 0.8
SMAD3-201ENST00000327367 KDM4AO75164 1064 aa20.02■□□□□ 0.8
SMAD3-201ENST00000327367 CAGE1Q8TC20 777 aa20.02■□□□□ 0.8
SMAD3-201ENST00000327367 C22orf23Q9BZE7 217 aa20.02■□□□□ 0.8
SMAD3-201ENST00000327367 CCDC27Q2M243 656 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms