RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 MBD5Q9P267 1494 aa14.37□□□□□ -0.11
CUL4A-201ENST00000326335 TTC37Q6PGP7 1564 aa14.37□□□□□ -0.11
CUL4A-201ENST00000326335 CFAP70Q5T0N1 1121 aa14.37□□□□□ -0.11
CUL4A-201ENST00000326335 ITSN2Q9NZM3 1697 aa14.36□□□□□ -0.11
CUL4A-201ENST00000326335 TMEM132EQ6IEE7 984 aa14.36□□□□□ -0.11
CUL4A-201ENST00000326335 CDCA7LQ96GN5 454 aa14.35□□□□□ -0.11
CUL4A-201ENST00000326335 TRAK1Q9UPV9 953 aa14.35□□□□□ -0.11
CUL4A-201ENST00000326335 PLIN1O60240 522 aa14.35□□□□□ -0.11
CUL4A-201ENST00000326335 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
CUL4A-201ENST00000326335 RSPH4AQ5TD94 716 aa14.34□□□□□ -0.11
CUL4A-201ENST00000326335 STK26Q9P289 416 aa14.34□□□□□ -0.11
CUL4A-201ENST00000326335 RBM19Q9Y4C8 960 aaKnown RBP14.34□□□□□ -0.11
CUL4A-201ENST00000326335 SAMD9LQ8IVG5 1584 aa14.34□□□□□ -0.11
CUL4A-201ENST00000326335 NEUROD2Q15784 382 aa14.34□□□□□ -0.11
CUL4A-201ENST00000326335 CCDC146Q8IYE0 955 aa14.33□□□□□ -0.11
CUL4A-201ENST00000326335 ARHGEF12Q9NZN5 1544 aa14.33□□□□□ -0.11
CUL4A-201ENST00000326335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.33□□□□□ -0.123e-8■■■□□ 17.7
CUL4A-201ENST00000326335 CFAP65Q6ZU64 1925 aaKnown RBP14.33□□□□□ -0.12
CUL4A-201ENST00000326335 TMF1P82094 1093 aa14.32□□□□□ -0.12
CUL4A-201ENST00000326335 SPATA31E1Q6ZUB1 1445 aa14.32□□□□□ -0.12
CUL4A-201ENST00000326335 FAM135AQ9P2D6 1515 aa14.32□□□□□ -0.12
CUL4A-201ENST00000326335 CCDC136Q96JN2 1154 aa14.31□□□□□ -0.12
CUL4A-201ENST00000326335 DISP3Q9P2K9 1392 aa14.31□□□□□ -0.12
CUL4A-201ENST00000326335 KNSTRNQ9Y448 316 aa14.3□□□□□ -0.12
CUL4A-201ENST00000326335 SKAP1Q86WV1 359 aa14.3□□□□□ -0.12
CUL4A-201ENST00000326335 PNISRQ8TF01 805 aaKnown RBP14.3□□□□□ -0.12
CUL4A-201ENST00000326335 DHX29Q7Z478 1369 aaKnown RBP14.29□□□□□ -0.12
CUL4A-201ENST00000326335 ADGRL2O95490 1459 aa14.28□□□□□ -0.12
CUL4A-201ENST00000326335 BCORL1Q5H9F3 1711 aa14.28□□□□□ -0.12
CUL4A-201ENST00000326335 ZBED9Q6R2W3 1325 aa14.28□□□□□ -0.12
CUL4A-201ENST00000326335 NPM2Q86SE8 214 aaKnown RBP14.28□□□□□ -0.12
CUL4A-201ENST00000326335 WASHC2CQ9Y4E1 1318 aa14.27□□□□□ -0.12
CUL4A-201ENST00000326335 CDC42BPBQ9Y5S2 1711 aa14.27□□□□□ -0.12
CUL4A-201ENST00000326335 ADGRF5Q8IZF2 1346 aa14.26□□□□□ -0.13
CUL4A-201ENST00000326335 KTN1Q86UP2 1357 aaKnown RBP14.26□□□□□ -0.13
CUL4A-201ENST00000326335 ABCC2Q92887 1545 aa14.25□□□□□ -0.13
CUL4A-201ENST00000326335 PLA2R1Q13018 1463 aa14.25□□□□□ -0.13
CUL4A-201ENST00000326335 PLCH2O75038 1416 aa14.25□□□□□ -0.13
CUL4A-201ENST00000326335 ERICH6Q7L0X2 663 aa14.25□□□□□ -0.13
CUL4A-201ENST00000326335 STAG3Q9UJ98 1225 aa14.25□□□□□ -0.13
CUL4A-201ENST00000326335 WDR43Q15061 677 aaKnown RBP eCLIP14.24□□□□□ -0.13
CUL4A-201ENST00000326335 MYBBP1AQ9BQG0 1328 aaKnown RBP14.24□□□□□ -0.13
CUL4A-201ENST00000326335 ADGBQ8N7X0 1667 aa14.24□□□□□ -0.13
CUL4A-201ENST00000326335 TESK2Q96S53 571 aa14.24□□□□□ -0.13
CUL4A-201ENST00000326335 PPP4R2Q9NY27 417 aa14.24□□□□□ -0.13
CUL4A-201ENST00000326335 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
CUL4A-201ENST00000326335 NUDCQ9Y266 331 aa14.23□□□□□ -0.13
CUL4A-201ENST00000326335 FANCAO15360 1455 aa14.23□□□□□ -0.13
CUL4A-201ENST00000326335 KANK1Q14678 1352 aa14.23□□□□□ -0.13
CUL4A-201ENST00000326335 ADAMTS8Q9UP79 889 aa14.23□□□□□ -0.13
CUL4A-201ENST00000326335 A2MP01023 1474 aa14.22□□□□□ -0.13
CUL4A-201ENST00000326335 NLRP13Q86W25 1043 aa14.22□□□□□ -0.13
CUL4A-201ENST00000326335 RRP7AQ9Y3A4 280 aaKnown RBP14.22□□□□□ -0.13
CUL4A-201ENST00000326335 PRAG1Q86YV5 1406 aa14.21□□□□□ -0.13
CUL4A-201ENST00000326335 EXOC6Q8TAG9 804 aa14.21□□□□□ -0.13
CUL4A-201ENST00000326335 ASXL2Q76L83 1435 aa14.2□□□□□ -0.14
CUL4A-201ENST00000326335 ADGRL1O94910 1474 aa14.2□□□□□ -0.14
CUL4A-201ENST00000326335 UGGT1Q9NYU2 1555 aa14.2□□□□□ -0.14
CUL4A-201ENST00000326335 RALBP1Q15311 655 aa14.19□□□□□ -0.14
CUL4A-201ENST00000326335 ADCY10Q96PN6 1610 aa14.19□□□□□ -0.14
CUL4A-201ENST00000326335 SLC12A5Q9H2X9 1139 aa14.18□□□□□ -0.14
CUL4A-201ENST00000326335 RALGAPBQ86X10 1494 aa14.18□□□□□ -0.14
CUL4A-201ENST00000326335 CROCC2H7BZ55 1655 aa14.18□□□□□ -0.14
CUL4A-201ENST00000326335 SHANK2Q9UPX8 1470 aa14.18□□□□□ -0.14
CUL4A-201ENST00000326335 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
CUL4A-201ENST00000326335 ZCCHC11Q5TAX3 1644 aaKnown RBP14.17□□□□□ -0.14
CUL4A-201ENST00000326335 PREX2Q70Z35 1606 aa14.17□□□□□ -0.14
CUL4A-201ENST00000326335 FAM69CQ0P6D2 419 aa14.17□□□□□ -0.14
CUL4A-201ENST00000326335 ERBINQ96RT1 1412 aa14.16□□□□□ -0.14
CUL4A-201ENST00000326335 RCAN3Q9UKA8 241 aa14.16□□□□□ -0.14
CUL4A-201ENST00000326335 PER1O15534 1290 aaPredicted RBP14.16□□□□□ -0.14
CUL4A-201ENST00000326335 PLEKHG5O94827 1062 aa14.16□□□□□ -0.14
CUL4A-201ENST00000326335 FBXO31Q5XUX0 539 aaPredicted RBP14.16□□□□□ -0.14
CUL4A-201ENST00000326335 NUTM2FA1L443 756 aa14.15□□□□□ -0.14
CUL4A-201ENST00000326335 KDM5CP41229 1560 aa14.15□□□□□ -0.14
CUL4A-201ENST00000326335 CABP2Q9NPB3 220 aa14.14□□□□□ -0.15
CUL4A-201ENST00000326335 APAF1O14727 1248 aa14.13□□□□□ -0.15
CUL4A-201ENST00000326335 MYO5CQ9NQX4 1742 aa14.13□□□□□ -0.15
CUL4A-201ENST00000326335 WDR7Q9Y4E6 1490 aa14.13□□□□□ -0.15
CUL4A-201ENST00000326335 CD109Q6YHK3 1445 aa14.13□□□□□ -0.15
CUL4A-201ENST00000326335 PPP2R1AP30153 589 aa14.13□□□□□ -0.15
CUL4A-201ENST00000326335 SRPK2P78362 688 aaKnown RBP14.13□□□□□ -0.15
CUL4A-201ENST00000326335 MINK1Q8N4C8 1332 aaPredicted RBP14.12□□□□□ -0.15
CUL4A-201ENST00000326335 FBLN1P23142 703 aa14.12□□□□□ -0.15
CUL4A-201ENST00000326335 ARID4BQ4LE39 1312 aaPredicted RBP14.11□□□□□ -0.15
CUL4A-201ENST00000326335 NBR1Q14596 966 aa14.11□□□□□ -0.15
CUL4A-201ENST00000326335 C20orf194Q5TEA3 1177 aa14.11□□□□□ -0.15
CUL4A-201ENST00000326335 BCL2L13Q9BXK5 485 aa14.11□□□□□ -0.15
CUL4A-201ENST00000326335 UHRF1BP1Q6BDS2 1440 aa14.1□□□□□ -0.15
CUL4A-201ENST00000326335 ARHGEF5Q12774 1597 aa14.1□□□□□ -0.15
CUL4A-201ENST00000326335 DUOX2Q9NRD8 1548 aa14.1□□□□□ -0.15
CUL4A-201ENST00000326335 SOX12O15370 315 aa14.1□□□□□ -0.15
CUL4A-201ENST00000326335 MORC1Q86VD1 984 aa14.09□□□□□ -0.15
CUL4A-201ENST00000326335 KDM5DQ9BY66 1539 aa14.09□□□□□ -0.15
CUL4A-201ENST00000326335 MSH5O43196 834 aa14.08□□□□□ -0.16
CUL4A-201ENST00000326335 FRAT1Q92837 279 aaPredicted RBP14.08□□□□□ -0.16
CUL4A-201ENST00000326335 POGKQ9P215 609 aa14.08□□□□□ -0.16
CUL4A-201ENST00000326335 CANXP27824 592 aaKnown RBP14.08□□□□□ -0.16
CUL4A-201ENST00000326335 RRP1P56182 461 aaKnown RBP14.08□□□□□ -0.16
CUL4A-201ENST00000326335 U2SURPO15042 1029 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms