RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 WASHC2CQ9Y4E1 1318 aa12.82□□□□□ -0.36
CCNC-201ENST00000326298 ZNF142P52746 1687 aaPredicted RBP12.82□□□□□ -0.36
CCNC-201ENST00000326298 PPP6R1Q9UPN7 881 aa12.82□□□□□ -0.36
CCNC-201ENST00000326298 ZNF335Q9H4Z2 1342 aaPredicted RBP12.81□□□□□ -0.36
CCNC-201ENST00000326298 MIA2Q96PC5 1412 aa12.81□□□□□ -0.36
CCNC-201ENST00000326298 KDM5DQ9BY66 1539 aa12.81□□□□□ -0.36
CCNC-201ENST00000326298 MAST1Q9Y2H9 1570 aa12.81□□□□□ -0.36
CCNC-201ENST00000326298 ABCC5O15440 1437 aa12.8□□□□□ -0.36
CCNC-201ENST00000326298 DNMT1P26358 1616 aaKnown RBP12.8□□□□□ -0.36
CCNC-201ENST00000326298 MROH1Q8NDA8 1641 aa12.8□□□□□ -0.36
CCNC-201ENST00000326298 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
CCNC-201ENST00000326298 PZPP20742 1482 aa12.79□□□□□ -0.36
CCNC-201ENST00000326298 TNRQ92752 1358 aa12.79□□□□□ -0.36
CCNC-201ENST00000326298 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
CCNC-201ENST00000326298 RRP7BPQ9NSQ0 103 aa12.78□□□□□ -0.36
CCNC-201ENST00000326298 PTPN23Q9H3S7 1636 aa12.78□□□□□ -0.36
CCNC-201ENST00000326298 RNF17Q9BXT8 1623 aaKnown RBP12.77□□□□□ -0.36
CCNC-201ENST00000326298 ABCC3O15438 1527 aa12.77□□□□□ -0.36
CCNC-201ENST00000326298 PLA2R1Q13018 1463 aa12.77□□□□□ -0.37
CCNC-201ENST00000326298 CHIC2Q9UKJ5 165 aa12.77□□□□□ -0.37
CCNC-201ENST00000326298 FGD6Q6ZV73 1430 aa12.77□□□□□ -0.37
CCNC-201ENST00000326298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCNC-201ENST00000326298 KIF15Q9NS87 1388 aa12.75□□□□□ -0.37
CCNC-201ENST00000326298 NEURL4Q96JN8 1562 aa12.75□□□□□ -0.37
CCNC-201ENST00000326298 APLP2Q06481 763 aa12.75□□□□□ -0.37
CCNC-201ENST00000326298 DAPK1P53355 1430 aa12.75□□□□□ -0.37
CCNC-201ENST00000326298 CFAP65Q6ZU64 1925 aaKnown RBP12.74□□□□□ -0.37
CCNC-201ENST00000326298 CROCC2H7BZ55 1655 aa12.74□□□□□ -0.37
CCNC-201ENST00000326298 CEP152O94986 1710 aa12.74□□□□□ -0.37
CCNC-201ENST00000326298 PKD2Q13563 968 aa12.74□□□□□ -0.37
CCNC-201ENST00000326298 DUOX2Q9NRD8 1548 aa12.73□□□□□ -0.37
CCNC-201ENST00000326298 EIF2AK4Q9P2K8 1649 aaKnown RBP12.72□□□□□ -0.37
CCNC-201ENST00000326298 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
CCNC-201ENST00000326298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCNC-201ENST00000326298 UGGT1Q9NYU2 1555 aa12.71□□□□□ -0.37
CCNC-201ENST00000326298 ERVK-7P63135 1459 aa12.71□□□□□ -0.37
CCNC-201ENST00000326298 SHANK2Q9UPX8 1470 aa12.71□□□□□ -0.37
CCNC-201ENST00000326298 PPARGC1BQ86YN6 1023 aaKnown RBP12.71□□□□□ -0.37
CCNC-201ENST00000326298 SPATA31D1Q6ZQQ2 1576 aa12.71□□□□□ -0.38
CCNC-201ENST00000326298 PRDM15P57071 1507 aaPredicted RBP12.69□□□□□ -0.38
CCNC-201ENST00000326298 NLRP1Q9C000 1473 aa12.69□□□□□ -0.38
CCNC-201ENST00000326298 POLR1AO95602 1720 aaPredicted RBP12.69□□□□□ -0.38
CCNC-201ENST00000326298 ZC3H13Q5T200 1668 aaKnown RBP12.68□□□□□ -0.38
CCNC-201ENST00000326298 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
CCNC-201ENST00000326298 ERBINQ96RT1 1412 aa12.68□□□□□ -0.38
CCNC-201ENST00000326298 THEMISQ8N1K5 641 aaPredicted RBP12.68□□□□□ -0.38
CCNC-201ENST00000326298 ANKLE2Q86XL3 938 aa12.67□□□□□ -0.38
CCNC-201ENST00000326298 DEPDC5O75140 1603 aa12.67□□□□□ -0.38
CCNC-201ENST00000326298 VWDEQ8N2E2 1590 aa12.66□□□□□ -0.38
CCNC-201ENST00000326298 LTKP29376 864 aa12.66□□□□□ -0.38
CCNC-201ENST00000326298 UBAP1LF5GYI3 381 aa12.65□□□□□ -0.38
CCNC-201ENST00000326298 NPHP4O75161 1426 aaPredicted RBP12.65□□□□□ -0.38
CCNC-201ENST00000326298 UBR1Q8IWV7 1749 aa12.65□□□□□ -0.38
CCNC-201ENST00000326298 ANKRD30AQ9BXX3 1397 aa12.65□□□□□ -0.38
CCNC-201ENST00000326298 IQSEC2Q5JU85 1478 aa12.65□□□□□ -0.39
CCNC-201ENST00000326298 MED14O60244 1454 aa12.64□□□□□ -0.39
CCNC-201ENST00000326298 ARHGAP31Q2M1Z3 1444 aa12.64□□□□□ -0.39
CCNC-201ENST00000326298 STRCP1A6NGW2 1772 aa12.64□□□□□ -0.39
CCNC-201ENST00000326298 ADGRL2O95490 1459 aa12.63□□□□□ -0.39
CCNC-201ENST00000326298 ILDR2Q71H61 639 aa12.62□□□□□ -0.39
CCNC-201ENST00000326298 IQGAP1P46940 1657 aa12.61□□□□□ -0.39
CCNC-201ENST00000326298 IDI1Q13907 227 aa12.61□□□□□ -0.39
CCNC-201ENST00000326298 PIK3C2BO00750 1634 aa12.61□□□□□ -0.39
CCNC-201ENST00000326298 ALKQ9UM73 1620 aa12.61□□□□□ -0.39
CCNC-201ENST00000326298 SYNMO15061 1565 aa12.61□□□□□ -0.39
CCNC-201ENST00000326298 ARHGAP23Q9P227 1491 aa12.6□□□□□ -0.39
CCNC-201ENST00000326298 LMTK2Q8IWU2 1503 aa12.6□□□□□ -0.39
CCNC-201ENST00000326298 PIP4K2BP78356 416 aa12.6□□□□□ -0.39
CCNC-201ENST00000326298 SENP3Q9H4L4 574 aaPredicted RBP12.6□□□□□ -0.39
CCNC-201ENST00000326298 DISP3Q9P2K9 1392 aa12.59□□□□□ -0.39
CCNC-201ENST00000326298 ANKRD50Q9ULJ7 1429 aa12.59□□□□□ -0.39
CCNC-201ENST00000326298 TXNDC2Q86VQ3 553 aa12.59□□□□□ -0.39
CCNC-201ENST00000326298 SCAF11Q99590 1463 aaKnown RBP12.58□□□□□ -0.4
CCNC-201ENST00000326298 ITGAEP38570 1179 aa12.58□□□□□ -0.4
CCNC-201ENST00000326298 KANK1Q14678 1352 aa12.58□□□□□ -0.4
CCNC-201ENST00000326298 SLIT1O75093 1534 aa12.58□□□□□ -0.4
CCNC-201ENST00000326298 EFCAB6Q5THR3 1501 aa12.58□□□□□ -0.4
CCNC-201ENST00000326298 NOS1P29475 1434 aa12.57□□□□□ -0.4
CCNC-201ENST00000326298 CPS1P31327 1500 aa12.57□□□□□ -0.4
CCNC-201ENST00000326298 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
CCNC-201ENST00000326298 SCAF1Q9H7N4 1312 aaKnown RBP12.57□□□□□ -0.4
CCNC-201ENST00000326298 TMEM2Q9UHN6 1383 aa12.56□□□□□ -0.4
CCNC-201ENST00000326298 HSPA1LP34931 641 aa12.56□□□□□ -0.4
CCNC-201ENST00000326298 RBM33Q96EV2 1170 aaKnown RBP12.54□□□□□ -0.4
CCNC-201ENST00000326298 SLC26A8Q96RN1 970 aa12.54□□□□□ -0.4
CCNC-201ENST00000326298 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
CCNC-201ENST00000326298 XIRP1Q702N8 1843 aaKnown RBP12.51□□□□□ -0.41
CCNC-201ENST00000326298 UNC13BO14795 1591 aa12.51□□□□□ -0.41
CCNC-201ENST00000326298 MYO5BQ9ULV0 1848 aa12.51□□□□□ -0.41
CCNC-201ENST00000326298 TET3O43151 1660 aa12.51□□□□□ -0.41
CCNC-201ENST00000326298 TOM1O60784 492 aa12.51□□□□□ -0.41
CCNC-201ENST00000326298 EID1Q9Y6B2 187 aa12.51□□□□□ -0.41
CCNC-201ENST00000326298 ADGRB3O60242 1522 aa12.5□□□□□ -0.41
CCNC-201ENST00000326298 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
CCNC-201ENST00000326298 ROCK1Q13464 1354 aa12.5□□□□□ -0.41
CCNC-201ENST00000326298 E9PCH4 1651 aa12.5□□□□□ -0.41
CCNC-201ENST00000326298 KDM5AP29375 1690 aaKnown RBP12.48□□□□□ -0.41
CCNC-201ENST00000326298 SLC52A1Q9NWF4 448 aa12.48□□□□□ -0.41
CCNC-201ENST00000326298 ZFYVE9O95405 1425 aa12.48□□□□□ -0.41
CCNC-201ENST00000326298 RPRD2Q5VT52 1461 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms