RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 SLC26A8Q96RN1 970 aa17.6■□□□□ 0.41
LIN28A-202ENST00000326279 PAK3O75914 559 aaPredicted RBP17.6■□□□□ 0.41
LIN28A-202ENST00000326279 KIF14Q15058 1648 aa17.6■□□□□ 0.41
LIN28A-202ENST00000326279 CCDC141Q6ZP82 1450 aa17.6■□□□□ 0.41
LIN28A-202ENST00000326279 RBM33Q96EV2 1170 aaKnown RBP17.59■□□□□ 0.41
LIN28A-202ENST00000326279 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
LIN28A-202ENST00000326279 AKNAQ7Z591 1439 aa17.59■□□□□ 0.41
LIN28A-202ENST00000326279 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.4
LIN28A-202ENST00000326279 CDCA8Q53HL2 280 aa17.58■□□□□ 0.4
LIN28A-202ENST00000326279 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.57■□□□□ 0.4
LIN28A-202ENST00000326279 HAP1P54257 671 aaPredicted RBP17.56■□□□□ 0.4
LIN28A-202ENST00000326279 WDR7Q9Y4E6 1490 aa17.55■□□□□ 0.4
LIN28A-202ENST00000326279 CHD1O14646 1710 aa17.55■□□□□ 0.4
LIN28A-202ENST00000326279 PLCH2O75038 1416 aa17.55■□□□□ 0.4
LIN28A-202ENST00000326279 U2SURPO15042 1029 aaKnown RBP17.55■□□□□ 0.4
LIN28A-202ENST00000326279 USP47Q96K76 1375 aa17.55■□□□□ 0.4
LIN28A-202ENST00000326279 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
LIN28A-202ENST00000326279 MAP3K1Q13233 1512 aa17.55■□□□□ 0.4
LIN28A-202ENST00000326279 ABCC2Q92887 1545 aa17.54■□□□□ 0.4
LIN28A-202ENST00000326279 TXNDC2Q86VQ3 553 aa17.53■□□□□ 0.4
LIN28A-202ENST00000326279 IDI1Q13907 227 aa17.53■□□□□ 0.4
LIN28A-202ENST00000326279 SYCP2Q9BX26 1530 aa17.52■□□□□ 0.4
LIN28A-202ENST00000326279 PANK3Q9H999 370 aa17.52■□□□□ 0.4
LIN28A-202ENST00000326279 CCER2I3L3R5 266 aa17.51■□□□□ 0.39
LIN28A-202ENST00000326279 KIAA1107Q9UPP5 1409 aa17.51■□□□□ 0.39
LIN28A-202ENST00000326279 MORC1Q86VD1 984 aa17.5■□□□□ 0.39
LIN28A-202ENST00000326279 SAMD9Q5K651 1589 aa17.49■□□□□ 0.39
LIN28A-202ENST00000326279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.49■□□□□ 0.39
LIN28A-202ENST00000326279 DENND4BO75064 1496 aaPredicted RBP17.49■□□□□ 0.39
LIN28A-202ENST00000326279 CABP2Q9NPB3 220 aa17.48■□□□□ 0.39
LIN28A-202ENST00000326279 WASHC2AQ641Q2 1341 aa17.48■□□□□ 0.39
LIN28A-202ENST00000326279 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
LIN28A-202ENST00000326279 ROCK1Q13464 1354 aa17.47■□□□□ 0.39
LIN28A-202ENST00000326279 CCDC136Q96JN2 1154 aa17.46■□□□□ 0.39
LIN28A-202ENST00000326279 NGDNQ8NEJ9 315 aaKnown RBP17.45■□□□□ 0.38
LIN28A-202ENST00000326279 LAS1LQ9Y4W2 734 aaKnown RBP17.44■□□□□ 0.38
LIN28A-202ENST00000326279 ANKRD30BQ9BXX2 1392 aa17.44■□□□□ 0.38
LIN28A-202ENST00000326279 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
LIN28A-202ENST00000326279 KIF7Q2M1P5 1343 aa17.43■□□□□ 0.38
LIN28A-202ENST00000326279 ADGRF5Q8IZF2 1346 aa17.43■□□□□ 0.38
LIN28A-202ENST00000326279 NUTM2GQ5VZR2 741 aa17.43■□□□□ 0.38
LIN28A-202ENST00000326279 C11orf95C9JLR9 678 aaPredicted RBP17.42■□□□□ 0.38
LIN28A-202ENST00000326279 PRAM1Q96QH2 718 aa17.42■□□□□ 0.38
LIN28A-202ENST00000326279 DHX29Q7Z478 1369 aaKnown RBP17.41■□□□□ 0.38
LIN28A-202ENST00000326279 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
LIN28A-202ENST00000326279 WAPLQ7Z5K2 1190 aa17.4■□□□□ 0.38
LIN28A-202ENST00000326279 DAXXQ9UER7 740 aaPredicted RBP17.39■□□□□ 0.38
LIN28A-202ENST00000326279 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
LIN28A-202ENST00000326279 CCDC146Q8IYE0 955 aa17.39■□□□□ 0.37
LIN28A-202ENST00000326279 SLC12A5Q9H2X9 1139 aa17.38■□□□□ 0.37
LIN28A-202ENST00000326279 CFAP53Q96M91 514 aa17.38■□□□□ 0.37
LIN28A-202ENST00000326279 CENPJQ9HC77 1338 aaPredicted RBP17.38■□□□□ 0.37
LIN28A-202ENST00000326279 ERBINQ96RT1 1412 aa17.38■□□□□ 0.37
LIN28A-202ENST00000326279 NPM2Q86SE8 214 aaKnown RBP17.38■□□□□ 0.37
LIN28A-202ENST00000326279 PMFBP1Q8TBY8 1022 aa17.37■□□□□ 0.37
LIN28A-202ENST00000326279 SLC52A1Q9NWF4 448 aa17.37■□□□□ 0.37
LIN28A-202ENST00000326279 B4GALNT3Q6L9W6 998 aa17.37■□□□□ 0.37
LIN28A-202ENST00000326279 U2AF1L5P0DN76 240 aaPredicted RBP17.35■□□□□ 0.37
LIN28A-202ENST00000326279 U2AF1Q01081 240 aaKnown RBP eCLIP17.35■□□□□ 0.37
LIN28A-202ENST00000326279 CCDC7Q96M83 1385 aa17.35■□□□□ 0.37
LIN28A-202ENST00000326279 GGNBP2Q9H3C7 697 aa17.34■□□□□ 0.37
LIN28A-202ENST00000326279 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
LIN28A-202ENST00000326279 ABCA8O94911 1581 aa17.32■□□□□ 0.36
LIN28A-202ENST00000326279 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
LIN28A-202ENST00000326279 HSPA2P54652 639 aa17.32■□□□□ 0.36
LIN28A-202ENST00000326279 EIF3AQ14152 1382 aaKnown RBP17.32■□□□□ 0.36
LIN28A-202ENST00000326279 RRP7AQ9Y3A4 280 aaKnown RBP17.32■□□□□ 0.36
LIN28A-202ENST00000326279 THEMISQ8N1K5 641 aaPredicted RBP17.31■□□□□ 0.36
LIN28A-202ENST00000326279 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
LIN28A-202ENST00000326279 CFAP43Q8NDM7 1665 aa17.31■□□□□ 0.36
LIN28A-202ENST00000326279 MYT1Q01538 1121 aa17.31■□□□□ 0.36
LIN28A-202ENST00000326279 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
LIN28A-202ENST00000326279 TERF2IPQ9NYB0 399 aa17.31■□□□□ 0.36
LIN28A-202ENST00000326279 EVC2Q86UK5 1308 aa17.3■□□□□ 0.36
LIN28A-202ENST00000326279 MAPKBP1O60336 1514 aa17.3■□□□□ 0.36
LIN28A-202ENST00000326279 AEBP2Q6ZN18 517 aaPredicted RBP17.3■□□□□ 0.36
LIN28A-202ENST00000326279 A2MP01023 1474 aa17.3■□□□□ 0.36
LIN28A-202ENST00000326279 YEATS2Q9ULM3 1422 aa17.29■□□□□ 0.36
LIN28A-202ENST00000326279 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
LIN28A-202ENST00000326279 CFAP65Q6ZU64 1925 aaKnown RBP17.29■□□□□ 0.36
LIN28A-202ENST00000326279 ZNF518AQ6AHZ1 1483 aa17.28■□□□□ 0.36
LIN28A-202ENST00000326279 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.27■□□□□ 0.36
LIN28A-202ENST00000326279 NUDCQ9Y266 331 aa17.27■□□□□ 0.36
LIN28A-202ENST00000326279 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
LIN28A-202ENST00000326279 ARXQ96QS3 562 aa17.26■□□□□ 0.35
LIN28A-202ENST00000326279 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
LIN28A-202ENST00000326279 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
LIN28A-202ENST00000326279 RALBP1Q15311 655 aa17.26■□□□□ 0.35
LIN28A-202ENST00000326279 CABP1Q9NZU7 370 aa17.26■□□□□ 0.35
LIN28A-202ENST00000326279 ABCC10Q5T3U5 1492 aa17.25■□□□□ 0.35
LIN28A-202ENST00000326279 NLRP13Q86W25 1043 aa17.25■□□□□ 0.35
LIN28A-202ENST00000326279 TCOF1Q13428 1488 aaKnown RBP17.25■□□□□ 0.35
LIN28A-202ENST00000326279 ANKLE2Q86XL3 938 aa17.24■□□□□ 0.35
LIN28A-202ENST00000326279 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
LIN28A-202ENST00000326279 TSPOAP1O95153 1857 aa17.23■□□□□ 0.35
LIN28A-202ENST00000326279 CSB-PGBD3P0DP91 1061 aa17.23■□□□□ 0.35
LIN28A-202ENST00000326279 NOS1P29475 1434 aa17.22■□□□□ 0.35
LIN28A-202ENST00000326279 CDK19Q9BWU1 502 aa17.22■□□□□ 0.35
LIN28A-202ENST00000326279 TTC37Q6PGP7 1564 aa17.22■□□□□ 0.35
LIN28A-202ENST00000326279 MBD5Q9P267 1494 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms