RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 ADGRL1O94910 1474 aa27.14■■□□□ 1.94
CHMP6-201ENST00000325167 HSPA5P11021 654 aaKnown RBP27.12■■□□□ 1.93
CHMP6-201ENST00000325167 UHRF1BP1Q6BDS2 1440 aa27.12■■□□□ 1.93
CHMP6-201ENST00000325167 INO80Q9ULG1 1556 aaPredicted RBP27.11■■□□□ 1.93
CHMP6-201ENST00000325167 ATP7AQ04656 1500 aa27.1■■□□□ 1.93
CHMP6-201ENST00000325167 SCAPERQ9BY12 1400 aa27.09■■□□□ 1.93
CHMP6-201ENST00000325167 NBPF8Q3BBV2 869 aa27.09■■□□□ 1.93
CHMP6-201ENST00000325167 HIRIP3Q9BW71 556 aaPredicted RBP27.08■■□□□ 1.93
CHMP6-201ENST00000325167 ATP10AO60312 1499 aa27.08■■□□□ 1.93
CHMP6-201ENST00000325167 CCDC144AA2RUR9 1427 aa27.07■■□□□ 1.92
CHMP6-201ENST00000325167 NEO1Q92859 1461 aa27.07■■□□□ 1.92
CHMP6-201ENST00000325167 AFAP1Q8N556 730 aa27.07■■□□□ 1.92
CHMP6-201ENST00000325167 RAPGEF3O95398 923 aa27.05■■□□□ 1.92
CHMP6-201ENST00000325167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.04■■□□□ 1.92
CHMP6-201ENST00000325167 ZNF518AQ6AHZ1 1483 aa27.04■■□□□ 1.92
CHMP6-201ENST00000325167 YTHDC1Q96MU7 727 aaKnown RBP27.03■■□□□ 1.92
CHMP6-201ENST00000325167 EIF2AK4Q9P2K8 1649 aaKnown RBP27.03■■□□□ 1.92
CHMP6-201ENST00000325167 ANP32CO43423 234 aa27.02■■□□□ 1.92
CHMP6-201ENST00000325167 DEPDC5O75140 1603 aa27.01■■□□□ 1.91
CHMP6-201ENST00000325167 SPATA31E1Q6ZUB1 1445 aa27.01■■□□□ 1.91
CHMP6-201ENST00000325167 RALGAPBQ86X10 1494 aa27.01■■□□□ 1.91
CHMP6-201ENST00000325167 KANK1Q14678 1352 aa26.99■■□□□ 1.91
CHMP6-201ENST00000325167 CCER2I3L3R5 266 aa26.98■■□□□ 1.91
CHMP6-201ENST00000325167 FRMPD1Q5SYB0 1578 aa26.98■■□□□ 1.91
CHMP6-201ENST00000325167 DHX29Q7Z478 1369 aaKnown RBP26.98■■□□□ 1.91
CHMP6-201ENST00000325167 PLA2R1Q13018 1463 aa26.96■■□□□ 1.91
CHMP6-201ENST00000325167 WASHC2AQ641Q2 1341 aa26.95■■□□□ 1.9
CHMP6-201ENST00000325167 POGZQ7Z3K3 1410 aa26.92■■□□□ 1.9
CHMP6-201ENST00000325167 KDM5CP41229 1560 aa26.92■■□□□ 1.9
CHMP6-201ENST00000325167 CCDC7Q96M83 1385 aa26.92■■□□□ 1.9
CHMP6-201ENST00000325167 POLR1AO95602 1720 aaPredicted RBP26.92■■□□□ 1.9
CHMP6-201ENST00000325167 VWDEQ8N2E2 1590 aa26.92■■□□□ 1.9
CHMP6-201ENST00000325167 MYT1LQ9UL68 1186 aa26.92■■□□□ 1.9
CHMP6-201ENST00000325167 MLH3Q9UHC1 1453 aa26.9■■□□□ 1.9
CHMP6-201ENST00000325167 ARID4BQ4LE39 1312 aaPredicted RBP26.9■■□□□ 1.9
CHMP6-201ENST00000325167 TET3O43151 1660 aa26.9■■□□□ 1.9
CHMP6-201ENST00000325167 USP47Q96K76 1375 aa26.9■■□□□ 1.9
CHMP6-201ENST00000325167 PRDM15P57071 1507 aaPredicted RBP26.89■■□□□ 1.9
CHMP6-201ENST00000325167 RICTORQ6R327 1708 aa26.89■■□□□ 1.9
CHMP6-201ENST00000325167 DCAF11Q8TEB1 546 aa26.89■■□□□ 1.89
CHMP6-201ENST00000325167 KIDINS220Q9ULH0 1771 aa26.88■■□□□ 1.89
CHMP6-201ENST00000325167 ZNF326Q5BKZ1 582 aaKnown RBP26.88■■□□□ 1.89
CHMP6-201ENST00000325167 CNTLNQ9NXG0 1405 aa26.88■■□□□ 1.89
CHMP6-201ENST00000325167 SCAF1Q9H7N4 1312 aaKnown RBP26.87■■□□□ 1.89
CHMP6-201ENST00000325167 TRPM2O94759 1503 aa26.86■■□□□ 1.89
CHMP6-201ENST00000325167 PTPRTO14522 1441 aa26.85■■□□□ 1.89
CHMP6-201ENST00000325167 STAC3Q96MF2 364 aa26.85■■□□□ 1.89
CHMP6-201ENST00000325167 E9PCH4 1651 aa26.84■■□□□ 1.89
CHMP6-201ENST00000325167 PRAG1Q86YV5 1406 aa26.84■■□□□ 1.89
CHMP6-201ENST00000325167 A2MP01023 1474 aa26.84■■□□□ 1.89
CHMP6-201ENST00000325167 HECW2Q9P2P5 1572 aa26.84■■□□□ 1.89
CHMP6-201ENST00000325167 KIF3BO15066 747 aa26.83■■□□□ 1.89
CHMP6-201ENST00000325167 CARD11Q9BXL7 1154 aa26.82■■□□□ 1.88
CHMP6-201ENST00000325167 KDM2AQ9Y2K7 1162 aa26.81■■□□□ 1.88
CHMP6-201ENST00000325167 ARHGEF40Q8TER5 1519 aa26.81■■□□□ 1.88
CHMP6-201ENST00000325167 LMTK2Q8IWU2 1503 aa26.8■■□□□ 1.88
CHMP6-201ENST00000325167 RNF17Q9BXT8 1623 aaKnown RBP26.79■■□□□ 1.88
CHMP6-201ENST00000325167 SPHKAPQ2M3C7 1700 aa26.79■■□□□ 1.88
CHMP6-201ENST00000325167 NEURL4Q96JN8 1562 aa26.79■■□□□ 1.88
CHMP6-201ENST00000325167 LAMC1P11047 1609 aa26.78■■□□□ 1.88
CHMP6-201ENST00000325167 MROH1Q8NDA8 1641 aa26.78■■□□□ 1.88
CHMP6-201ENST00000325167 ROCK2O75116 1388 aaKnown RBP26.78■■□□□ 1.88
CHMP6-201ENST00000325167 KIF7Q2M1P5 1343 aa26.78■■□□□ 1.88
CHMP6-201ENST00000325167 TRPM1Q7Z4N2 1603 aa26.77■■□□□ 1.88
CHMP6-201ENST00000325167 GPRASP1Q5JY77 1395 aa26.77■■□□□ 1.88
CHMP6-201ENST00000325167 BCORL1Q5H9F3 1711 aa26.76■■□□□ 1.88
CHMP6-201ENST00000325167 ZMYM4Q5VZL5 1548 aa26.76■■□□□ 1.87
CHMP6-201ENST00000325167 C11orf95C9JLR9 678 aaPredicted RBP26.75■■□□□ 1.87
CHMP6-201ENST00000325167 YEATS2Q9ULM3 1422 aa26.75■■□□□ 1.87
CHMP6-201ENST00000325167 RGL3Q3MIN7 710 aa26.73■■□□□ 1.87
CHMP6-201ENST00000325167 CEP152O94986 1710 aa26.73■■□□□ 1.87
CHMP6-201ENST00000325167 EFCAB6Q5THR3 1501 aa26.72■■□□□ 1.87
CHMP6-201ENST00000325167 ADAMTSL3P82987 1691 aa26.72■■□□□ 1.87
CHMP6-201ENST00000325167 GTF3C3Q9Y5Q9 886 aa26.7■■□□□ 1.87
CHMP6-201ENST00000325167 SIGLEC1Q9BZZ2 1709 aa26.69■■□□□ 1.86
CHMP6-201ENST00000325167 CLTCL1P53675 1640 aa26.67■■□□□ 1.86
CHMP6-201ENST00000325167 ABCA6Q8N139 1617 aa26.66■■□□□ 1.86
CHMP6-201ENST00000325167 MADDQ8WXG6 1647 aa26.66■■□□□ 1.86
CHMP6-201ENST00000325167 PTPRMP28827 1452 aa26.64■■□□□ 1.86
CHMP6-201ENST00000325167 ST20-MTHFSA0A0A6YYL1 179 aa26.61■■□□□ 1.85
CHMP6-201ENST00000325167 DIP2CQ9Y2E4 1556 aa26.6■■□□□ 1.85
CHMP6-201ENST00000325167 PRKRIP1Q9H875 184 aaPredicted RBP26.59■■□□□ 1.85
CHMP6-201ENST00000325167 RIMS1Q86UR5 1692 aaKnown RBP26.58■■□□□ 1.85
CHMP6-201ENST00000325167 MLECQ14165 292 aa26.57■■□□□ 1.84
CHMP6-201ENST00000325167 MYOM2P54296 1465 aa26.54■■□□□ 1.84
CHMP6-201ENST00000325167 KIF1BO60333 1816 aa26.54■■□□□ 1.84
CHMP6-201ENST00000325167 ABCC3O15438 1527 aa26.54■■□□□ 1.84
CHMP6-201ENST00000325167 NBPF1Q3BBV0 1214 aa26.53■■□□□ 1.84
CHMP6-201ENST00000325167 KIAA1210Q9ULL0 1709 aa26.53■■□□□ 1.84
CHMP6-201ENST00000325167 ZC3H13Q5T200 1668 aaKnown RBP26.52■■□□□ 1.84
CHMP6-201ENST00000325167 GGT6Q6P531 493 aa26.51■■□□□ 1.83
CHMP6-201ENST00000325167 PLPPR3Q6T4P5 718 aa26.51■■□□□ 1.83
CHMP6-201ENST00000325167 WASHC2CQ9Y4E1 1318 aa26.51■■□□□ 1.83
CHMP6-201ENST00000325167 NPATQ14207 1427 aa26.51■■□□□ 1.83
CHMP6-201ENST00000325167 KTN1Q86UP2 1357 aaKnown RBP26.49■■□□□ 1.83
CHMP6-201ENST00000325167 ARHGAP31Q2M1Z3 1444 aa26.49■■□□□ 1.83
CHMP6-201ENST00000325167 POLR3GLQ9BT43 218 aa26.47■■□□□ 1.83
CHMP6-201ENST00000325167 CAMSAP1Q5T5Y3 1602 aa26.47■■□□□ 1.83
CHMP6-201ENST00000325167 FER1L4A9Z1Z3 1794 aa26.47■■□□□ 1.83
CHMP6-201ENST00000325167 ADGRB3O60242 1522 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms