RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 H3BQV1 296 aa18.01■□□□□ 0.47
NUP98-201ENST00000324932 PDE4CQ08493 712 aa18.01■□□□□ 0.47
NUP98-201ENST00000324932 IFFO2Q5TF58 517 aa18.01■□□□□ 0.47
NUP98-201ENST00000324932 VPS8Q8N3P4 1428 aa18.01■□□□□ 0.47
NUP98-201ENST00000324932 TPD52L1Q16890 204 aaPredicted RBP18.01■□□□□ 0.47
NUP98-201ENST00000324932 MPHOSPH9Q99550 1183 aa18■□□□□ 0.47
NUP98-201ENST00000324932 TAF7LQ5H9L4 462 aa17.99■□□□□ 0.47
NUP98-201ENST00000324932 SLC4A10Q6U841 1118 aa17.99■□□□□ 0.47
NUP98-201ENST00000324932 FAM13BQ9NYF5 915 aa17.99■□□□□ 0.47
NUP98-201ENST00000324932 RAB3GAP2Q9H2M9 1393 aa17.99■□□□□ 0.47
NUP98-201ENST00000324932 SLC4A3P48751 1232 aa17.99■□□□□ 0.47
NUP98-201ENST00000324932 CALRP27797 417 aaKnown RBP17.98■□□□□ 0.47
NUP98-201ENST00000324932 FAM184AQ8NB25 1140 aa17.98■□□□□ 0.47
NUP98-201ENST00000324932 STK26Q9P289 416 aa17.98■□□□□ 0.47
NUP98-201ENST00000324932 PES1O00541 588 aaKnown RBP17.97■□□□□ 0.47
NUP98-201ENST00000324932 PRM3Q9NNZ6 103 aa17.97■□□□□ 0.47
NUP98-201ENST00000324932 CHMP3Q9Y3E7 222 aa17.97■□□□□ 0.47
NUP98-201ENST00000324932 CGNL1Q0VF96 1302 aa17.97■□□□□ 0.47
NUP98-201ENST00000324932 TPM2P07951 284 aa17.97■□□□□ 0.47
NUP98-201ENST00000324932 FAM43AQ8N2R8 423 aa17.97■□□□□ 0.47
NUP98-201ENST00000324932 TERF2IPQ9NYB0 399 aa17.97■□□□□ 0.47
NUP98-201ENST00000324932 CHMP5Q9NZZ3 219 aa17.97■□□□□ 0.47
NUP98-201ENST00000324932 ZNF592Q92610 1267 aa17.96■□□□□ 0.47
NUP98-201ENST00000324932 CCDC146Q8IYE0 955 aa17.96■□□□□ 0.47
NUP98-201ENST00000324932 ZNF330Q9Y3S2 320 aaPredicted RBP17.96■□□□□ 0.47
NUP98-201ENST00000324932 IPO7O95373 1038 aaKnown RBP17.95■□□□□ 0.46
NUP98-201ENST00000324932 FOXD1Q16676 465 aa17.95■□□□□ 0.46
NUP98-201ENST00000324932 MYBBP1AQ9BQG0 1328 aaKnown RBP17.95■□□□□ 0.46
NUP98-201ENST00000324932 TOMM22Q9NS69 142 aa17.94■□□□□ 0.46
NUP98-201ENST00000324932 RRP1P56182 461 aaKnown RBP17.94■□□□□ 0.46
NUP98-201ENST00000324932 KIF15Q9NS87 1388 aa17.94■□□□□ 0.46
NUP98-201ENST00000324932 MARCH6O60337 910 aa17.93■□□□□ 0.46
NUP98-201ENST00000324932 MTERF4Q7Z6M4 381 aaKnown RBP17.93■□□□□ 0.46
NUP98-201ENST00000324932 REC8O95072 547 aa17.92■□□□□ 0.46
NUP98-201ENST00000324932 CARMIL1Q5VZK9 1371 aa17.92■□□□□ 0.46
NUP98-201ENST00000324932 ZKSCAN2Q63HK3 967 aa17.92■□□□□ 0.46
NUP98-201ENST00000324932 MAP7D2Q96T17 732 aa17.92■□□□□ 0.46
NUP98-201ENST00000324932 NUP155O75694 1391 aa17.92■□□□□ 0.46
NUP98-201ENST00000324932 CSB-PGBD3P0DP91 1061 aa17.92■□□□□ 0.46
NUP98-201ENST00000324932 ARGLU1Q9NWB6 273 aaPredicted RBP17.92■□□□□ 0.46
NUP98-201ENST00000324932 FMN1Q68DA7 1419 aa17.92■□□□□ 0.46
NUP98-201ENST00000324932 ANKRD45Q5TZF3 282 aa17.92■□□□□ 0.46
NUP98-201ENST00000324932 EXOC6Q8TAG9 804 aa17.91■□□□□ 0.46
NUP98-201ENST00000324932 NOM1Q5C9Z4 860 aaKnown RBP17.91■□□□□ 0.46
NUP98-201ENST00000324932 ZBED9Q6R2W3 1325 aa17.91■□□□□ 0.46
NUP98-201ENST00000324932 E9PSI1 815 aa17.91■□□□□ 0.46
NUP98-201ENST00000324932 L3MBTL2Q969R5 705 aa17.9■□□□□ 0.46
NUP98-201ENST00000324932 CPLX2Q6PUV4 134 aaKnown RBP17.9■□□□□ 0.46
NUP98-201ENST00000324932 HOMER1Q86YM7 354 aa17.9■□□□□ 0.46
NUP98-201ENST00000324932 RILPL2Q969X0 211 aa17.9■□□□□ 0.46
NUP98-201ENST00000324932 ANKRD20A12PQ8NF67 263 aa17.9■□□□□ 0.46
NUP98-201ENST00000324932 ACBD3Q9H3P7 528 aa17.9■□□□□ 0.46
NUP98-201ENST00000324932 TMX4Q9H1E5 349 aaPredicted RBP17.89■□□□□ 0.46
NUP98-201ENST00000324932 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
NUP98-201ENST00000324932 ANKRD30AQ9BXX3 1397 aa17.88■□□□□ 0.45
NUP98-201ENST00000324932 PAK3O75914 559 aaPredicted RBP17.88■□□□□ 0.45
NUP98-201ENST00000324932 CDR1P51861 262 aa17.88■□□□□ 0.45
NUP98-201ENST00000324932 AKAP17AQ02040 695 aaKnown RBP17.88■□□□□ 0.45
NUP98-201ENST00000324932 PATL2C9JE40 543 aaKnown RBP17.88■□□□□ 0.45
NUP98-201ENST00000324932 RUFY2Q8WXA3 655 aa17.88■□□□□ 0.45
NUP98-201ENST00000324932 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
NUP98-201ENST00000324932 NUCB2P80303 420 aa17.87■□□□□ 0.45
NUP98-201ENST00000324932 GGT6Q6P531 493 aa17.87■□□□□ 0.45
NUP98-201ENST00000324932 ZKSCAN1P17029 563 aaPredicted RBP17.87■□□□□ 0.45
NUP98-201ENST00000324932 FOXD4L6Q3SYB3 417 aaPredicted RBP17.87■□□□□ 0.45
NUP98-201ENST00000324932 FOXD4L3Q6VB84 417 aaPredicted RBP17.87■□□□□ 0.45
NUP98-201ENST00000324932 CRBNQ96SW2 442 aa17.87■□□□□ 0.45
NUP98-201ENST00000324932 DIAPH3Q9NSV4 1193 aa17.87■□□□□ 0.45
NUP98-201ENST00000324932 MCTP1Q6DN14 999 aa17.85■□□□□ 0.45
NUP98-201ENST00000324932 CCDC47Q96A33 483 aaKnown RBP17.85■□□□□ 0.45
NUP98-201ENST00000324932 SYNE3Q6ZMZ3 975 aa17.85■□□□□ 0.45
NUP98-201ENST00000324932 MNS1Q8NEH6 495 aa17.85■□□□□ 0.45
NUP98-201ENST00000324932 MRE11P49959 708 aa17.84■□□□□ 0.45
NUP98-201ENST00000324932 RRP12Q5JTH9 1297 aaKnown RBP17.84■□□□□ 0.45
NUP98-201ENST00000324932 LRRFIP1Q32MZ4 808 aaKnown RBP17.84■□□□□ 0.45
NUP98-201ENST00000324932 HSP90B2PQ58FF3 399 aa17.84■□□□□ 0.45
NUP98-201ENST00000324932 HOOK1Q9UJC3 728 aaKnown RBP17.84■□□□□ 0.45
NUP98-201ENST00000324932 AK7Q96M32 723 aa17.84■□□□□ 0.45
NUP98-201ENST00000324932 BICD2Q8TD16 824 aa17.83■□□□□ 0.45
NUP98-201ENST00000324932 NGEFQ8N5V2 710 aa17.83■□□□□ 0.45
NUP98-201ENST00000324932 PLIN1O60240 522 aa17.83■□□□□ 0.44
NUP98-201ENST00000324932 DDX19BQ9UMR2 479 aa17.83■□□□□ 0.44
NUP98-201ENST00000324932 RUFY1Q96T51 708 aa17.83■□□□□ 0.44
NUP98-201ENST00000324932 PRKRIP1Q9H875 184 aaPredicted RBP17.83■□□□□ 0.44
NUP98-201ENST00000324932 COG6Q9Y2V7 657 aa17.82■□□□□ 0.44
NUP98-201ENST00000324932 TRIM29Q14134 588 aa17.82■□□□□ 0.44
NUP98-201ENST00000324932 VPS53Q5VIR6 699 aa17.82■□□□□ 0.44
NUP98-201ENST00000324932 MLECQ14165 292 aa17.81■□□□□ 0.44
NUP98-201ENST00000324932 IFT57Q9NWB7 429 aa17.81■□□□□ 0.44
NUP98-201ENST00000324932 PCMTD1Q96MG8 357 aaPredicted RBP17.81■□□□□ 0.44
NUP98-201ENST00000324932 CCDC39Q9UFE4 941 aa17.81■□□□□ 0.44
NUP98-201ENST00000324932 SOGA1O94964 1423 aa17.8■□□□□ 0.44
NUP98-201ENST00000324932 SASS6Q6UVJ0 657 aa17.8■□□□□ 0.44
NUP98-201ENST00000324932 RRP7AQ9Y3A4 280 aaKnown RBP17.8■□□□□ 0.44
NUP98-201ENST00000324932 FRAT2O75474 233 aaPredicted RBP17.8■□□□□ 0.44
NUP98-201ENST00000324932 BCL2L13Q9BXK5 485 aa17.8■□□□□ 0.44
NUP98-201ENST00000324932 CWC15Q9P013 229 aaKnown RBP17.8■□□□□ 0.44
NUP98-201ENST00000324932 CCDC66A2RUB6 948 aa17.79■□□□□ 0.44
NUP98-201ENST00000324932 CUX2O14529 1486 aa17.78■□□□□ 0.44
NUP98-201ENST00000324932 NFKBIBQ15653 356 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms