RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 CLUAP1Q96AJ1 413 aa26.08■■□□□ 1.77
RNF40-201ENST00000324685 FOXD4L1Q9NU39 408 aa26.08■■□□□ 1.77
RNF40-201ENST00000324685 NOL8Q76FK4 1167 aaKnown RBP26.07■■□□□ 1.76
RNF40-201ENST00000324685 CHMP4CQ96CF2 233 aa26.06■■□□□ 1.76
RNF40-201ENST00000324685 CENPQQ7L2Z9 268 aaPredicted RBP26.05■■□□□ 1.76
RNF40-201ENST00000324685 MYBBP1AQ9BQG0 1328 aaKnown RBP26.03■■□□□ 1.76
RNF40-201ENST00000324685 SF3A1Q15459 793 aaKnown RBP26.03■■□□□ 1.76
RNF40-201ENST00000324685 TRHP20396 242 aaPredicted RBP26.03■■□□□ 1.76
RNF40-201ENST00000324685 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.03■■□□□ 1.76
RNF40-201ENST00000324685 SKOR2Q2VWA4 1001 aaPredicted RBP26.03■■□□□ 1.76
RNF40-201ENST00000324685 L3MBTL2Q969R5 705 aa26.02■■□□□ 1.76
RNF40-201ENST00000324685 CEP89Q96ST8 783 aa26■■□□□ 1.75
RNF40-201ENST00000324685 ATP6V1DQ9Y5K8 247 aa26■■□□□ 1.75
RNF40-201ENST00000324685 CREBRFQ8IUR6 639 aa26■■□□□ 1.75
RNF40-201ENST00000324685 FAM161AQ3B820 660 aa25.99■■□□□ 1.75
RNF40-201ENST00000324685 RSPH4AQ5TD94 716 aa25.99■■□□□ 1.75
RNF40-201ENST00000324685 AMPHP49418 695 aa25.98■■□□□ 1.75
RNF40-201ENST00000324685 H3BQV1 296 aa25.97■■□□□ 1.75
RNF40-201ENST00000324685 IFFO2Q5TF58 517 aa25.97■■□□□ 1.75
RNF40-201ENST00000324685 TOMM22Q9NS69 142 aa25.96■■□□□ 1.75
RNF40-201ENST00000324685 CECR2Q9BXF3 1484 aa25.96■■□□□ 1.75
RNF40-201ENST00000324685 KIF3BO15066 747 aa25.96■■□□□ 1.75
RNF40-201ENST00000324685 RSPH6AQ9H0K4 717 aa25.96■■□□□ 1.75
RNF40-201ENST00000324685 NGDNQ8NEJ9 315 aaKnown RBP25.95■■□□□ 1.74
RNF40-201ENST00000324685 EID1Q9Y6B2 187 aa25.94■■□□□ 1.74
RNF40-201ENST00000324685 MARCH6O60337 910 aa25.93■■□□□ 1.74
RNF40-201ENST00000324685 CCDC18Q5T9S5 1454 aa25.93■■□□□ 1.74
RNF40-201ENST00000324685 TPD52L1Q16890 204 aaPredicted RBP25.93■■□□□ 1.74
RNF40-201ENST00000324685 TSR1Q2NL82 804 aaKnown RBP25.92■■□□□ 1.74
RNF40-201ENST00000324685 FOXD4L5Q5VV16 416 aaPredicted RBP25.92■■□□□ 1.74
RNF40-201ENST00000324685 FOXD4L4Q8WXT5 416 aaPredicted RBP25.92■■□□□ 1.74
RNF40-201ENST00000324685 G3V3G9 751 aa25.92■■□□□ 1.74
RNF40-201ENST00000324685 GOLGA6L19H0YKK7 550 aa25.92■■□□□ 1.74
RNF40-201ENST00000324685 DCAF8Q5TAQ9 597 aa25.92■■□□□ 1.74
RNF40-201ENST00000324685 DDX49Q9Y6V7 483 aaKnown RBP25.92■■□□□ 1.74
RNF40-201ENST00000324685 FAM184AQ8NB25 1140 aa25.92■■□□□ 1.74
RNF40-201ENST00000324685 E9PSI1 815 aa25.91■■□□□ 1.74
RNF40-201ENST00000324685 HSP90AA2PQ14568 343 aaPredicted RBP25.91■■□□□ 1.74
RNF40-201ENST00000324685 PDE4AP27815 886 aa25.91■■□□□ 1.74
RNF40-201ENST00000324685 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
RNF40-201ENST00000324685 CCDC88BA6NC98 1476 aa25.9■■□□□ 1.74
RNF40-201ENST00000324685 ZKSCAN2Q63HK3 967 aa25.9■■□□□ 1.74
RNF40-201ENST00000324685 SETQ01105 290 aaPredicted RBP25.89■■□□□ 1.74
RNF40-201ENST00000324685 TPM2P07951 284 aa25.89■■□□□ 1.74
RNF40-201ENST00000324685 RILPL2Q969X0 211 aa25.89■■□□□ 1.73
RNF40-201ENST00000324685 PRM3Q9NNZ6 103 aa25.89■■□□□ 1.73
RNF40-201ENST00000324685 TPM1P09493 284 aa25.88■■□□□ 1.73
RNF40-201ENST00000324685 ANKRD45Q5TZF3 282 aa25.88■■□□□ 1.73
RNF40-201ENST00000324685 PDE4CQ08493 712 aa25.88■■□□□ 1.73
RNF40-201ENST00000324685 GSE1Q14687 1217 aa25.87■■□□□ 1.73
RNF40-201ENST00000324685 UACAQ9BZF9 1416 aa25.87■■□□□ 1.73
RNF40-201ENST00000324685 FRAT2O75474 233 aaPredicted RBP25.87■■□□□ 1.73
RNF40-201ENST00000324685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.87■■□□□ 1.73
RNF40-201ENST00000324685 HNRNPMP52272 730 aaKnown RBP eCLIP25.87■■□□□ 1.73
RNF40-201ENST00000324685 BECN2A8MW95 431 aa25.87■■□□□ 1.73
RNF40-201ENST00000324685 PDS5BQ9NTI5 1447 aa25.87■■□□□ 1.73
RNF40-201ENST00000324685 RRP1P56182 461 aaKnown RBP25.86■■□□□ 1.73
RNF40-201ENST00000324685 CCDC9Q9Y3X0 531 aaKnown RBP25.86■■□□□ 1.73
RNF40-201ENST00000324685 CGNL1Q0VF96 1302 aa25.86■■□□□ 1.73
RNF40-201ENST00000324685 GPS2Q13227 327 aa25.85■■□□□ 1.73
RNF40-201ENST00000324685 PES1O00541 588 aaKnown RBP25.85■■□□□ 1.73
RNF40-201ENST00000324685 WASHC2CQ9Y4E1 1318 aa25.85■■□□□ 1.73
RNF40-201ENST00000324685 CCDC70Q6NSX1 233 aa25.85■■□□□ 1.73
RNF40-201ENST00000324685 AKAP17AQ02040 695 aaKnown RBP25.84■■□□□ 1.73
RNF40-201ENST00000324685 RRP7AQ9Y3A4 280 aaKnown RBP25.84■■□□□ 1.73
RNF40-201ENST00000324685 LRRFIP1Q32MZ4 808 aaKnown RBP25.84■■□□□ 1.73
RNF40-201ENST00000324685 PANK3Q9H999 370 aa25.84■■□□□ 1.73
RNF40-201ENST00000324685 VPS53Q5VIR6 699 aa25.84■■□□□ 1.73
RNF40-201ENST00000324685 CCDC144AA2RUR9 1427 aa25.82■■□□□ 1.72
RNF40-201ENST00000324685 LTV1Q96GA3 475 aaPredicted RBP25.82■■□□□ 1.72
RNF40-201ENST00000324685 ZBED9Q6R2W3 1325 aa25.82■■□□□ 1.72
RNF40-201ENST00000324685 RUFY2Q8WXA3 655 aa25.82■■□□□ 1.72
RNF40-201ENST00000324685 SMARCA2P51531 1590 aa25.81■■□□□ 1.72
RNF40-201ENST00000324685 SYNE3Q6ZMZ3 975 aa25.81■■□□□ 1.72
RNF40-201ENST00000324685 GTF2E1P29083 439 aaPredicted RBP25.8■■□□□ 1.72
RNF40-201ENST00000324685 DIAPH3Q9NSV4 1193 aa25.8■■□□□ 1.72
RNF40-201ENST00000324685 REC8O95072 547 aa25.79■■□□□ 1.72
RNF40-201ENST00000324685 TRAK1Q9UPV9 953 aa25.79■■□□□ 1.72
RNF40-201ENST00000324685 RAPGEF2Q9Y4G8 1499 aa25.79■■□□□ 1.72
RNF40-201ENST00000324685 NUTM2DQ5VT03 806 aaPredicted RBP25.78■■□□□ 1.72
RNF40-201ENST00000324685 CRBNQ96SW2 442 aa25.78■■□□□ 1.72
RNF40-201ENST00000324685 CPLX2Q6PUV4 134 aaKnown RBP25.77■■□□□ 1.72
RNF40-201ENST00000324685 EXOC6Q8TAG9 804 aa25.77■■□□□ 1.72
RNF40-201ENST00000324685 ST20-MTHFSA0A0A6YYL1 179 aa25.77■■□□□ 1.72
RNF40-201ENST00000324685 COG3Q96JB2 828 aa25.77■■□□□ 1.72
RNF40-201ENST00000324685 C1orf141Q5JVX7 400 aa25.77■■□□□ 1.72
RNF40-201ENST00000324685 CCAR2Q8N163 923 aaKnown RBP25.77■■□□□ 1.72
RNF40-201ENST00000324685 DDX19BQ9UMR2 479 aa25.76■■□□□ 1.71
RNF40-201ENST00000324685 FHOD3Q2V2M9 1422 aa25.75■■□□□ 1.71
RNF40-201ENST00000324685 TDRD9Q8NDG6 1382 aaKnown RBP25.75■■□□□ 1.71
RNF40-201ENST00000324685 EVC2Q86UK5 1308 aa25.75■■□□□ 1.71
RNF40-201ENST00000324685 ZKSCAN1P17029 563 aaPredicted RBP25.74■■□□□ 1.71
RNF40-201ENST00000324685 NGEFQ8N5V2 710 aa25.74■■□□□ 1.71
RNF40-201ENST00000324685 TRIM29Q14134 588 aa25.74■■□□□ 1.71
RNF40-201ENST00000324685 MCTP1Q6DN14 999 aa25.73■■□□□ 1.71
RNF40-201ENST00000324685 BCL2L13Q9BXK5 485 aa25.73■■□□□ 1.71
RNF40-201ENST00000324685 PRKRIP1Q9H875 184 aaPredicted RBP25.73■■□□□ 1.71
RNF40-201ENST00000324685 PLIN1O60240 522 aa25.73■■□□□ 1.71
RNF40-201ENST00000324685 SLC4A3P48751 1232 aa25.73■■□□□ 1.71
RNF40-201ENST00000324685 ROCK1Q13464 1354 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms