RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 MYBBP1AQ9BQG0 1328 aaKnown RBP26.61■■□□□ 1.85
CRLF3-201ENST00000324238 POLR1AO95602 1720 aaPredicted RBP26.6■■□□□ 1.85
CRLF3-201ENST00000324238 ADGRL2O95490 1459 aa26.58■■□□□ 1.85
CRLF3-201ENST00000324238 RRP1P56182 461 aaKnown RBP26.56■■□□□ 1.84
CRLF3-201ENST00000324238 ITSN2Q9NZM3 1697 aa26.56■■□□□ 1.84
CRLF3-201ENST00000324238 ANP32AP39687 249 aaKnown RBP26.56■■□□□ 1.84
CRLF3-201ENST00000324238 RCAN3Q9UKA8 241 aa26.56■■□□□ 1.84
CRLF3-201ENST00000324238 RALGAPBQ86X10 1494 aa26.56■■□□□ 1.84
CRLF3-201ENST00000324238 ABCC10Q5T3U5 1492 aa26.55■■□□□ 1.84
CRLF3-201ENST00000324238 ARID4BQ4LE39 1312 aaPredicted RBP26.54■■□□□ 1.84
CRLF3-201ENST00000324238 ADGBQ8N7X0 1667 aa26.54■■□□□ 1.84
CRLF3-201ENST00000324238 RALBP1Q15311 655 aa26.52■■□□□ 1.84
CRLF3-201ENST00000324238 UHRF1BP1Q6BDS2 1440 aa26.52■■□□□ 1.84
CRLF3-201ENST00000324238 CDC42BPAQ5VT25 1732 aa26.51■■□□□ 1.83
CRLF3-201ENST00000324238 IPO9Q96P70 1041 aaKnown RBP26.5■■□□□ 1.83
CRLF3-201ENST00000324238 LRPPRCP42704 1394 aaKnown RBP26.5■■□□□ 1.83
CRLF3-201ENST00000324238 MYT1LQ9UL68 1186 aa26.49■■□□□ 1.83
CRLF3-201ENST00000324238 BRD4O60885 1362 aaPredicted RBP26.49■■□□□ 1.83
CRLF3-201ENST00000324238 ZBTB47Q9UFB7 747 aaPredicted RBP26.49■■□□□ 1.83
CRLF3-201ENST00000324238 ABCA8O94911 1581 aa26.49■■□□□ 1.83
CRLF3-201ENST00000324238 NLRP13Q86W25 1043 aa26.48■■□□□ 1.83
CRLF3-201ENST00000324238 PANK3Q9H999 370 aa26.48■■□□□ 1.83
CRLF3-201ENST00000324238 CROCC2H7BZ55 1655 aa26.46■■□□□ 1.83
CRLF3-201ENST00000324238 KTN1Q86UP2 1357 aaKnown RBP26.46■■□□□ 1.83
CRLF3-201ENST00000324238 PER1O15534 1290 aaPredicted RBP26.45■■□□□ 1.82
CRLF3-201ENST00000324238 CCDC144AA2RUR9 1427 aa26.44■■□□□ 1.82
CRLF3-201ENST00000324238 DISP3Q9P2K9 1392 aa26.43■■□□□ 1.82
CRLF3-201ENST00000324238 LAS1LQ9Y4W2 734 aaKnown RBP26.41■■□□□ 1.82
CRLF3-201ENST00000324238 ARHGAP5Q13017 1502 aa26.4■■□□□ 1.82
CRLF3-201ENST00000324238 ADCY10Q96PN6 1610 aa26.4■■□□□ 1.82
CRLF3-201ENST00000324238 PLEKHH2Q8IVE3 1493 aa26.39■■□□□ 1.81
CRLF3-201ENST00000324238 CCDC141Q6ZP82 1450 aa26.38■■□□□ 1.81
CRLF3-201ENST00000324238 SYCP2Q9BX26 1530 aa26.38■■□□□ 1.81
CRLF3-201ENST00000324238 AFAP1Q8N556 730 aa26.38■■□□□ 1.81
CRLF3-201ENST00000324238 PDE4AP27815 886 aa26.37■■□□□ 1.81
CRLF3-201ENST00000324238 C20orf194Q5TEA3 1177 aa26.37■■□□□ 1.81
CRLF3-201ENST00000324238 TESK2Q96S53 571 aa26.37■■□□□ 1.81
CRLF3-201ENST00000324238 CRBNQ96SW2 442 aa26.37■■□□□ 1.81
CRLF3-201ENST00000324238 PRAG1Q86YV5 1406 aa26.36■■□□□ 1.81
CRLF3-201ENST00000324238 FAM135AQ9P2D6 1515 aa26.36■■□□□ 1.81
CRLF3-201ENST00000324238 ERCC6L2Q5T890 1561 aa26.36■■□□□ 1.81
CRLF3-201ENST00000324238 PARD3Q8TEW0 1356 aa26.35■■□□□ 1.81
CRLF3-201ENST00000324238 ARHGEF12Q9NZN5 1544 aa26.35■■□□□ 1.81
CRLF3-201ENST00000324238 SAMD9LQ8IVG5 1584 aa26.35■■□□□ 1.81
CRLF3-201ENST00000324238 ADAMTS8Q9UP79 889 aa26.33■■□□□ 1.81
CRLF3-201ENST00000324238 PLA2R1Q13018 1463 aa26.32■■□□□ 1.8
CRLF3-201ENST00000324238 SHANK2Q9UPX8 1470 aa26.32■■□□□ 1.8
CRLF3-201ENST00000324238 RTL5Q5HYW3 569 aaPredicted RBP26.3■■□□□ 1.8
CRLF3-201ENST00000324238 KDM5DQ9BY66 1539 aa26.29■■□□□ 1.8
CRLF3-201ENST00000324238 RSPH4AQ5TD94 716 aa26.29■■□□□ 1.8
CRLF3-201ENST00000324238 A2MP01023 1474 aa26.28■■□□□ 1.8
CRLF3-201ENST00000324238 TTC37Q6PGP7 1564 aa26.26■■□□□ 1.79
CRLF3-201ENST00000324238 CDC42BPBQ9Y5S2 1711 aa26.26■■□□□ 1.79
CRLF3-201ENST00000324238 TMF1P82094 1093 aa26.26■■□□□ 1.79
CRLF3-201ENST00000324238 SENP3Q9H4L4 574 aaPredicted RBP26.26■■□□□ 1.79
CRLF3-201ENST00000324238 TCERG1O14776 1098 aaKnown RBP26.25■■□□□ 1.79
CRLF3-201ENST00000324238 BACH2Q9BYV9 841 aa26.25■■□□□ 1.79
CRLF3-201ENST00000324238 EFCAB2Q5VUJ9 269 aa26.24■■□□□ 1.79
CRLF3-201ENST00000324238 PDE3BQ13370 1112 aa26.23■■□□□ 1.79
CRLF3-201ENST00000324238 SLC4A3P48751 1232 aa26.23■■□□□ 1.79
CRLF3-201ENST00000324238 ERBINQ96RT1 1412 aa26.22■■□□□ 1.79
CRLF3-201ENST00000324238 CCDC146Q8IYE0 955 aa26.22■■□□□ 1.79
CRLF3-201ENST00000324238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.21■■□□□ 1.79
CRLF3-201ENST00000324238 TRPM1Q7Z4N2 1603 aa26.18■■□□□ 1.78
CRLF3-201ENST00000324238 E9PCH4 1651 aa26.18■■□□□ 1.78
CRLF3-201ENST00000324238 KNSTRNQ9Y448 316 aa26.18■■□□□ 1.78
CRLF3-201ENST00000324238 SPAG9O60271 1321 aaKnown RBP26.18■■□□□ 1.78
CRLF3-201ENST00000324238 TRAPPC8Q9Y2L5 1435 aa26.17■■□□□ 1.78
CRLF3-201ENST00000324238 NEFMP07197 916 aa26.16■■□□□ 1.78
CRLF3-201ENST00000324238 ARHGEF5Q12774 1597 aa26.16■■□□□ 1.78
CRLF3-201ENST00000324238 COL17A1Q9UMD9 1497 aaPredicted RBP26.16■■□□□ 1.78
CRLF3-201ENST00000324238 WDR43Q15061 677 aaKnown RBP eCLIP26.16■■□□□ 1.78
CRLF3-201ENST00000324238 CHD1O14646 1710 aa26.15■■□□□ 1.78
CRLF3-201ENST00000324238 PPP2R1AP30153 589 aa26.15■■□□□ 1.78
CRLF3-201ENST00000324238 KIF3BO15066 747 aa26.14■■□□□ 1.77
CRLF3-201ENST00000324238 PLEKHH1Q9ULM0 1364 aa26.13■■□□□ 1.77
CRLF3-201ENST00000324238 PREX2Q70Z35 1606 aa26.13■■□□□ 1.77
CRLF3-201ENST00000324238 CHGAP10645 457 aaKnown RBP26.12■■□□□ 1.77
CRLF3-201ENST00000324238 GPRASP1Q5JY77 1395 aa26.12■■□□□ 1.77
CRLF3-201ENST00000324238 RGS3P49796 1198 aa26.09■■□□□ 1.77
CRLF3-201ENST00000324238 MAGI2Q86UL8 1455 aa26.08■■□□□ 1.77
CRLF3-201ENST00000324238 SPINK5Q9NQ38 1064 aaPredicted RBP26.08■■□□□ 1.77
CRLF3-201ENST00000324238 RTN4Q9NQC3 1192 aaKnown RBP26.08■■□□□ 1.77
CRLF3-201ENST00000324238 DUSP27Q5VZP5 1158 aa26.07■■□□□ 1.76
CRLF3-201ENST00000324238 BLMP54132 1417 aaPredicted RBP26.06■■□□□ 1.76
CRLF3-201ENST00000324238 AMER1Q5JTC6 1135 aaPredicted RBP26.05■■□□□ 1.76
CRLF3-201ENST00000324238 MS4A1P11836 297 aa26.04■■□□□ 1.76
CRLF3-201ENST00000324238 CFAP70Q5T0N1 1121 aa26.04■■□□□ 1.76
CRLF3-201ENST00000324238 WASHC2CQ9Y4E1 1318 aa26.03■■□□□ 1.76
CRLF3-201ENST00000324238 APAF1O14727 1248 aa26.03■■□□□ 1.76
CRLF3-201ENST00000324238 PRDM15P57071 1507 aaPredicted RBP26.03■■□□□ 1.76
CRLF3-201ENST00000324238 IL27Q8NEV9 243 aa26.03■■□□□ 1.76
CRLF3-201ENST00000324238 PLCH2O75038 1416 aa26.03■■□□□ 1.76
CRLF3-201ENST00000324238 ABCC2Q92887 1545 aa26.02■■□□□ 1.76
CRLF3-201ENST00000324238 BCAR3O75815 825 aa26.01■■□□□ 1.76
CRLF3-201ENST00000324238 GOLGA2Q08379 1002 aa26.01■■□□□ 1.76
CRLF3-201ENST00000324238 TNNT2P45379 298 aaPredicted RBP26.01■■□□□ 1.75
CRLF3-201ENST00000324238 DMRT2Q9Y5R5 561 aa26.01■■□□□ 1.75
CRLF3-201ENST00000324238 NUTM2DQ5VT03 806 aaPredicted RBP25.98■■□□□ 1.75
CRLF3-201ENST00000324238 WDR7Q9Y4E6 1490 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms