RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 NHSL1Q5SYE7 1610 aa5.4□□□□□ -1.54
HIF1A-201ENST00000323441 AHDC1Q5TGY3 1603 aaPredicted RBP5.4□□□□□ -1.54
HIF1A-201ENST00000323441 SLIT1O75093 1534 aa5.4□□□□□ -1.54
HIF1A-201ENST00000323441 PIP4K2BP78356 416 aa5.4□□□□□ -1.55
HIF1A-201ENST00000323441 SETBP1Q9Y6X0 1596 aa5.4□□□□□ -1.55
HIF1A-201ENST00000323441 ARHGAP23Q9P227 1491 aa5.39□□□□□ -1.55
HIF1A-201ENST00000323441 PLEKHD1A6NEE1 506 aa5.39□□□□□ -1.55
HIF1A-201ENST00000323441 TIAM1Q13009 1591 aa5.39□□□□□ -1.55
HIF1A-201ENST00000323441 EFCAB2Q5VUJ9 269 aa5.39□□□□□ -1.55
HIF1A-201ENST00000323441 UGGT1Q9NYU2 1555 aa5.38□□□□□ -1.55
HIF1A-201ENST00000323441 ABCC3O15438 1527 aa5.38□□□□□ -1.55
HIF1A-201ENST00000323441 FGD6Q6ZV73 1430 aa5.38□□□□□ -1.55
HIF1A-201ENST00000323441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.38□□□□□ -1.55
HIF1A-201ENST00000323441 TROQ12816 1431 aaPredicted RBP5.38□□□□□ -1.55
HIF1A-201ENST00000323441 TET3O43151 1660 aa5.37□□□□□ -1.55
HIF1A-201ENST00000323441 MSH5O43196 834 aa5.37□□□□□ -1.55
HIF1A-201ENST00000323441 A2MP01023 1474 aa5.37□□□□□ -1.55
HIF1A-201ENST00000323441 AFAP1Q8N556 730 aa5.37□□□□□ -1.55
HIF1A-201ENST00000323441 LAMC1P11047 1609 aa5.36□□□□□ -1.55
HIF1A-201ENST00000323441 KIAA1107Q9UPP5 1409 aa5.36□□□□□ -1.55
HIF1A-201ENST00000323441 NCOA2Q15596 1464 aa5.35□□□□□ -1.55
HIF1A-201ENST00000323441 SYCP2Q9BX26 1530 aa5.35□□□□□ -1.55
HIF1A-201ENST00000323441 SPHKAPQ2M3C7 1700 aa5.35□□□□□ -1.55
HIF1A-201ENST00000323441 RGS12O14924 1447 aa5.34□□□□□ -1.55
HIF1A-201ENST00000323441 CHD2O14647 1828 aaKnown RBP5.34□□□□□ -1.55
HIF1A-201ENST00000323441 NKTRP30414 1462 aaKnown RBP5.34□□□□□ -1.55
HIF1A-201ENST00000323441 TNRQ92752 1358 aa5.34□□□□□ -1.55
HIF1A-201ENST00000323441 JCADQ9P266 1359 aa5.34□□□□□ -1.55
HIF1A-201ENST00000323441 PRDM15P57071 1507 aaPredicted RBP5.34□□□□□ -1.55
HIF1A-201ENST00000323441 GPATCH8Q9UKJ3 1502 aaKnown RBP5.34□□□□□ -1.55
HIF1A-201ENST00000323441 MROH1Q8NDA8 1641 aa5.34□□□□□ -1.56
HIF1A-201ENST00000323441 ARID3CA6NKF2 412 aa5.33□□□□□ -1.56
HIF1A-201ENST00000323441 EIF2AK4Q9P2K8 1649 aaKnown RBP5.33□□□□□ -1.56
HIF1A-201ENST00000323441 RTEL1-TNFRSF6BF6WH68 1400 aa5.33□□□□□ -1.56
HIF1A-201ENST00000323441 MIA2Q96PC5 1412 aa5.33□□□□□ -1.56
HIF1A-201ENST00000323441 SPATA31A6Q5VVP1 1343 aa5.33□□□□□ -1.56
HIF1A-201ENST00000323441 FAM9AQ8IZU1 332 aaPredicted RBP5.32□□□□□ -1.56
HIF1A-201ENST00000323441 SCAF1Q9H7N4 1312 aaKnown RBP5.32□□□□□ -1.56
HIF1A-201ENST00000323441 SCAF11Q99590 1463 aaKnown RBP5.32□□□□□ -1.56
HIF1A-201ENST00000323441 PLEKHH2Q8IVE3 1493 aa5.31□□□□□ -1.56
HIF1A-201ENST00000323441 ANKLE2Q86XL3 938 aa5.31□□□□□ -1.56
HIF1A-201ENST00000323441 BCL9LQ86UU0 1499 aa5.31□□□□□ -1.56
HIF1A-201ENST00000323441 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.31□□□□□ -1.56
HIF1A-201ENST00000323441 MARF1Q9Y4F3 1742 aaKnown RBP5.31□□□□□ -1.56
HIF1A-201ENST00000323441 ZNF772Q68DY9 489 aaPredicted RBP5.31□□□□□ -1.56
HIF1A-201ENST00000323441 NCOA3Q9Y6Q9 1424 aa5.31□□□□□ -1.56
HIF1A-201ENST00000323441 UNC13BO14795 1591 aa5.3□□□□□ -1.56
HIF1A-201ENST00000323441 CLIP1P30622 1438 aa5.3□□□□□ -1.56
HIF1A-201ENST00000323441 ESF1Q9H501 851 aaKnown RBP5.3□□□□□ -1.56
HIF1A-201ENST00000323441 COL22A1Q8NFW1 1626 aaPredicted RBP5.3□□□□□ -1.56
HIF1A-201ENST00000323441 IFFO2Q5TF58 517 aa5.3□□□□□ -1.56
HIF1A-201ENST00000323441 ERVK-7P63135 1459 aa5.3□□□□□ -1.56
HIF1A-201ENST00000323441 MBD5Q9P267 1494 aa5.3□□□□□ -1.56
HIF1A-201ENST00000323441 FMN1Q68DA7 1419 aa5.29□□□□□ -1.56
HIF1A-201ENST00000323441 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.29□□□□□ -1.56
HIF1A-201ENST00000323441 CCDC18Q5T9S5 1454 aa5.29□□□□□ -1.56
HIF1A-201ENST00000323441 MAST1Q9Y2H9 1570 aa5.29□□□□□ -1.56
HIF1A-201ENST00000323441 PIK3C2BO00750 1634 aa5.29□□□□□ -1.56
HIF1A-201ENST00000323441 P3H3Q8IVL6 736 aa5.29□□□□□ -1.56
HIF1A-201ENST00000323441 THEMISQ8N1K5 641 aaPredicted RBP5.29□□□□□ -1.56
HIF1A-201ENST00000323441 SRCAPQ6ZRS2 3230 aa5.28□□□□□ -1.56
HIF1A-201ENST00000323441 CEP152O94986 1710 aa5.28□□□□□ -1.56
HIF1A-201ENST00000323441 DHX29Q7Z478 1369 aaKnown RBP5.28□□□□□ -1.56
HIF1A-201ENST00000323441 SETD5Q9C0A6 1442 aa5.27□□□□□ -1.57
HIF1A-201ENST00000323441 ARHGAP35Q9NRY4 1499 aa5.27□□□□□ -1.57
HIF1A-201ENST00000323441 ARHGAP31Q2M1Z3 1444 aa5.26□□□□□ -1.57
HIF1A-201ENST00000323441 ATAD2Q6PL18 1390 aa5.26□□□□□ -1.57
HIF1A-201ENST00000323441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.26□□□□□ -1.57
HIF1A-201ENST00000323441 HNRNPUL2Q1KMD3 747 aaKnown RBP5.26□□□□□ -1.57
HIF1A-201ENST00000323441 ARHGEF5Q12774 1597 aa5.26□□□□□ -1.57
HIF1A-201ENST00000323441 TMEM94Q12767 1356 aa5.26□□□□□ -1.57
HIF1A-201ENST00000323441 RXRBP28702 533 aa5.26□□□□□ -1.57
HIF1A-201ENST00000323441 BRWD3Q6RI45 1802 aa5.25□□□□□ -1.57
HIF1A-201ENST00000323441 EP400Q96L91 3159 aa5.24□□□□□ -1.57
HIF1A-201ENST00000323441 SPAG9O60271 1321 aaKnown RBP5.24□□□□□ -1.57
HIF1A-201ENST00000323441 FBXO31Q5XUX0 539 aaPredicted RBP5.24□□□□□ -1.57
HIF1A-201ENST00000323441 CCDC125Q86Z20 511 aa5.24□□□□□ -1.57
HIF1A-201ENST00000323441 ATRNO75882 1429 aa5.24□□□□□ -1.57
HIF1A-201ENST00000323441 EEA1Q15075 1411 aa5.24□□□□□ -1.57
HIF1A-201ENST00000323441 CASKIN1Q8WXD9 1431 aa5.24□□□□□ -1.57
HIF1A-201ENST00000323441 ZRANB1Q9UGI0 708 aa5.24□□□□□ -1.57
HIF1A-201ENST00000323441 ASXL1Q8IXJ9 1541 aa5.23□□□□□ -1.57
HIF1A-201ENST00000323441 PTPN23Q9H3S7 1636 aa5.23□□□□□ -1.57
HIF1A-201ENST00000323441 XRN1Q8IZH2 1706 aaKnown RBP5.23□□□□□ -1.57
HIF1A-201ENST00000323441 KCNA6P17658 529 aa5.23□□□□□ -1.57
HIF1A-201ENST00000323441 CDK11AQ9UQ88 783 aaPredicted RBP5.23□□□□□ -1.57
HIF1A-201ENST00000323441 DCCP43146 1447 aa5.23□□□□□ -1.57
HIF1A-201ENST00000323441 POTEDQ86YR6 584 aa5.22□□□□□ -1.57
HIF1A-201ENST00000323441 ADGRB3O60242 1522 aa5.22□□□□□ -1.57
HIF1A-201ENST00000323441 TNS1Q9HBL0 1735 aaKnown RBP5.22□□□□□ -1.57
HIF1A-201ENST00000323441 LTKP29376 864 aa5.22□□□□□ -1.57
HIF1A-201ENST00000323441 LMTK2Q8IWU2 1503 aa5.22□□□□□ -1.57
HIF1A-201ENST00000323441 RREB1Q92766 1687 aa5.22□□□□□ -1.57
HIF1A-201ENST00000323441 RBM6P78332 1123 aaKnown RBP5.22□□□□□ -1.57
HIF1A-201ENST00000323441 TRIM52Q96A61 297 aa5.22□□□□□ -1.57
HIF1A-201ENST00000323441 FYCO1Q9BQS8 1478 aa5.22□□□□□ -1.57
HIF1A-201ENST00000323441 EFCAB6Q5THR3 1501 aa5.22□□□□□ -1.57
HIF1A-201ENST00000323441 SUPT5HO00267 1087 aaKnown RBP5.21□□□□□ -1.57
HIF1A-201ENST00000323441 RGPD1P0DJD0 1748 aa5.21□□□□□ -1.57
HIF1A-201ENST00000323441 MYO5BQ9ULV0 1848 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms