RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 CCDC144AA2RUR9 1427 aa30.7■■■□□ 2.5
PNKP-201ENST00000322344 IQGAP3Q86VI3 1631 aa30.69■■■□□ 2.5
PNKP-201ENST00000322344 DCAF11Q8TEB1 546 aa30.68■■■□□ 2.5
PNKP-201ENST00000322344 ERBINQ96RT1 1412 aa30.67■■■□□ 2.5
PNKP-201ENST00000322344 TSHZ2Q9NRE2 1034 aa30.66■■■□□ 2.5
PNKP-201ENST00000322344 EFCAB2Q5VUJ9 269 aa30.65■■■□□ 2.5
PNKP-201ENST00000322344 MAGI2Q86UL8 1455 aa30.64■■■□□ 2.5
PNKP-201ENST00000322344 KDM2AQ9Y2K7 1162 aa30.63■■■□□ 2.49
PNKP-201ENST00000322344 ZBED9Q6R2W3 1325 aa30.63■■■□□ 2.49
PNKP-201ENST00000322344 FAM9BQ8IZU0 186 aa30.63■■■□□ 2.49
PNKP-201ENST00000322344 ABCC1P33527 1531 aa30.62■■■□□ 2.49
PNKP-201ENST00000322344 PRAG1Q86YV5 1406 aa30.6■■■□□ 2.49
PNKP-201ENST00000322344 PLA2R1Q13018 1463 aa30.6■■■□□ 2.49
PNKP-201ENST00000322344 ATP10AO60312 1499 aa30.59■■■□□ 2.49
PNKP-201ENST00000322344 ARAP3Q8WWN8 1544 aa30.59■■■□□ 2.49
PNKP-201ENST00000322344 POLR3GLQ9BT43 218 aa30.57■■■□□ 2.49
PNKP-201ENST00000322344 TRPM1Q7Z4N2 1603 aa30.57■■■□□ 2.49
PNKP-201ENST00000322344 ERICH6BQ5W0A0 696 aa30.55■■■□□ 2.48
PNKP-201ENST00000322344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.55■■■□□ 2.481e-7■■■■□ 24.4
PNKP-201ENST00000322344 ST20-MTHFSA0A0A6YYL1 179 aa30.54■■■□□ 2.48
PNKP-201ENST00000322344 LAMC1P11047 1609 aa30.53■■■□□ 2.48
PNKP-201ENST00000322344 GPRASP1Q5JY77 1395 aa30.52■■■□□ 2.48
PNKP-201ENST00000322344 KTN1Q86UP2 1357 aaKnown RBP30.52■■■□□ 2.48
PNKP-201ENST00000322344 A2MP01023 1474 aa30.51■■■□□ 2.47
PNKP-201ENST00000322344 RTEL1-TNFRSF6BF6WH68 1400 aa30.51■■■□□ 2.47
PNKP-201ENST00000322344 EIF2AK4Q9P2K8 1649 aaKnown RBP30.49■■■□□ 2.47
PNKP-201ENST00000322344 TRAPPC8Q9Y2L5 1435 aa30.48■■■□□ 2.47
PNKP-201ENST00000322344 E9PCH4 1651 aa30.47■■■□□ 2.47
PNKP-201ENST00000322344 RGL3Q3MIN7 710 aa30.42■■■□□ 2.46
PNKP-201ENST00000322344 SPAG9O60271 1321 aaKnown RBP30.42■■■□□ 2.46
PNKP-201ENST00000322344 PRDM15P57071 1507 aaPredicted RBP30.42■■■□□ 2.46
PNKP-201ENST00000322344 WDR7Q9Y4E6 1490 aa30.4■■■□□ 2.46
PNKP-201ENST00000322344 ZFYVE16Q7Z3T8 1539 aa30.4■■■□□ 2.46
PNKP-201ENST00000322344 RALBP1Q15311 655 aa30.4■■■□□ 2.46
PNKP-201ENST00000322344 MYT1Q01538 1121 aa30.38■■■□□ 2.45
PNKP-201ENST00000322344 BRD4O60885 1362 aaPredicted RBP30.36■■■□□ 2.45
PNKP-201ENST00000322344 MYBBP1AQ9BQG0 1328 aaKnown RBP30.35■■■□□ 2.45
PNKP-201ENST00000322344 SMG6Q86US8 1419 aaKnown RBP30.34■■■□□ 2.45
PNKP-201ENST00000322344 NBPF1Q3BBV0 1214 aa30.34■■■□□ 2.45
PNKP-201ENST00000322344 TMC1Q8TDI8 760 aa30.34■■■□□ 2.45
PNKP-201ENST00000322344 PNISRQ8TF01 805 aaKnown RBP30.34■■■□□ 2.45
PNKP-201ENST00000322344 ABCA9Q8IUA7 1624 aa30.34■■■□□ 2.45
PNKP-201ENST00000322344 COL17A1Q9UMD9 1497 aaPredicted RBP30.34■■■□□ 2.45
PNKP-201ENST00000322344 DEPDC5O75140 1603 aa30.32■■■□□ 2.44
PNKP-201ENST00000322344 TRPM2O94759 1503 aa30.31■■■□□ 2.44
PNKP-201ENST00000322344 CNGB1Q14028 1251 aaPredicted RBP30.3■■■□□ 2.44
PNKP-201ENST00000322344 PPP4R2Q9NY27 417 aa30.3■■■□□ 2.44
PNKP-201ENST00000322344 RNF17Q9BXT8 1623 aaKnown RBP30.29■■■□□ 2.44
PNKP-201ENST00000322344 IRX6P78412 446 aaPredicted RBP30.29■■■□□ 2.44
PNKP-201ENST00000322344 FANCAO15360 1455 aa30.29■■■□□ 2.44
PNKP-201ENST00000322344 INO80Q9ULG1 1556 aaPredicted RBP30.29■■■□□ 2.44
PNKP-201ENST00000322344 AFAP1Q8N556 730 aa30.29■■■□□ 2.44
PNKP-201ENST00000322344 STAC3Q96MF2 364 aa30.28■■■□□ 2.44
PNKP-201ENST00000322344 LRPPRCP42704 1394 aaKnown RBP30.27■■■□□ 2.44
PNKP-201ENST00000322344 PTPRTO14522 1441 aa30.27■■■□□ 2.44
PNKP-201ENST00000322344 ATP7AQ04656 1500 aa30.27■■■□□ 2.44
PNKP-201ENST00000322344 WASHC2CQ9Y4E1 1318 aa30.26■■■□□ 2.43
PNKP-201ENST00000322344 TESK2Q96S53 571 aa30.25■■■□□ 2.43
PNKP-201ENST00000322344 TET3O43151 1660 aa30.24■■■□□ 2.43
PNKP-201ENST00000322344 NUDCQ9Y266 331 aa30.24■■■□□ 2.43
PNKP-201ENST00000322344 PARD3Q8TEW0 1356 aa30.24■■■□□ 2.43
PNKP-201ENST00000322344 KANK1Q14678 1352 aa30.23■■■□□ 2.43
PNKP-201ENST00000322344 SPHKAPQ2M3C7 1700 aa30.22■■■□□ 2.43
PNKP-201ENST00000322344 VWDEQ8N2E2 1590 aa30.22■■■□□ 2.43
PNKP-201ENST00000322344 CEP152O94986 1710 aa30.21■■■□□ 2.43
PNKP-201ENST00000322344 MADDQ8WXG6 1647 aa30.2■■■□□ 2.43
PNKP-201ENST00000322344 TMF1P82094 1093 aa30.2■■■□□ 2.43
PNKP-201ENST00000322344 NLRP13Q86W25 1043 aa30.19■■■□□ 2.42
PNKP-201ENST00000322344 DISP3Q9P2K9 1392 aa30.19■■■□□ 2.42
PNKP-201ENST00000322344 ADGRL1O94910 1474 aa30.19■■■□□ 2.42
PNKP-201ENST00000322344 PER1O15534 1290 aaPredicted RBP30.18■■■□□ 2.42
PNKP-201ENST00000322344 SCAPERQ9BY12 1400 aa30.16■■■□□ 2.42
PNKP-201ENST00000322344 NEURL4Q96JN8 1562 aa30.16■■■□□ 2.42
PNKP-201ENST00000322344 ASXL2Q76L83 1435 aa30.15■■■□□ 2.42
PNKP-201ENST00000322344 RBM19Q9Y4C8 960 aaKnown RBP30.15■■■□□ 2.42
PNKP-201ENST00000322344 CLTCL1P53675 1640 aa30.14■■■□□ 2.42
PNKP-201ENST00000322344 RNF123Q5XPI4 1314 aa30.13■■■□□ 2.41
PNKP-201ENST00000322344 IQGAP1P46940 1657 aa30.12■■■□□ 2.41
PNKP-201ENST00000322344 INSRP06213 1382 aa30.09■■■□□ 2.41
PNKP-201ENST00000322344 KIF3BO15066 747 aa30.07■■■□□ 2.4
PNKP-201ENST00000322344 SCAF11Q99590 1463 aaKnown RBP30.06■■■□□ 2.4
PNKP-201ENST00000322344 ZMYM4Q5VZL5 1548 aa30.06■■■□□ 2.4
PNKP-201ENST00000322344 MROH1Q8NDA8 1641 aa30.06■■■□□ 2.4
PNKP-201ENST00000322344 PANK3Q9H999 370 aa30.06■■■□□ 2.4
PNKP-201ENST00000322344 MYT1LQ9UL68 1186 aa30.05■■■□□ 2.4
PNKP-201ENST00000322344 KIAA1210Q9ULL0 1709 aa30.04■■■□□ 2.4
PNKP-201ENST00000322344 CDCA8Q53HL2 280 aa30.03■■■□□ 2.4
PNKP-201ENST00000322344 ZNF518AQ6AHZ1 1483 aa30.02■■■□□ 2.4
PNKP-201ENST00000322344 EFCAB6Q5THR3 1501 aa29.99■■■□□ 2.39
PNKP-201ENST00000322344 KIDINS220Q9ULH0 1771 aa29.99■■■□□ 2.39
PNKP-201ENST00000322344 EIF3AQ14152 1382 aaKnown RBP29.99■■■□□ 2.39
PNKP-201ENST00000322344 CFAP74Q9C0B2 1584 aa29.99■■■□□ 2.39
PNKP-201ENST00000322344 LMTK2Q8IWU2 1503 aa29.99■■■□□ 2.39
PNKP-201ENST00000322344 NPM1P06748 294 aaKnown RBP eCLIP29.99■■■□□ 2.39
PNKP-201ENST00000322344 MYOM2P54296 1465 aa29.98■■■□□ 2.39
PNKP-201ENST00000322344 PDE3BQ13370 1112 aa29.98■■■□□ 2.39
PNKP-201ENST00000322344 SYNMO15061 1565 aa29.96■■■□□ 2.39
PNKP-201ENST00000322344 CC2D1BQ5T0F9 858 aaKnown RBP29.96■■■□□ 2.39
PNKP-201ENST00000322344 B4GALNT3Q6L9W6 998 aa29.96■■■□□ 2.39
PNKP-201ENST00000322344 SLC24A1O60721 1099 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms