RNA–Protein interactions for RNA: ENST00000321892.8

BPTF-202, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BPTF, Length 11,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-202ENST00000321892 CHMP4AQ9BY43 222 aa18.7■□□□□ 0.58
BPTF-202ENST00000321892 SF3A1Q15459 793 aaKnown RBP18.7■□□□□ 0.58
BPTF-202ENST00000321892 CHMP4CQ96CF2 233 aa18.69■□□□□ 0.58
BPTF-202ENST00000321892 RUFY1Q96T51 708 aa18.69■□□□□ 0.58
BPTF-202ENST00000321892 PDE4AP27815 886 aa18.69■□□□□ 0.58
BPTF-202ENST00000321892 HSP90B2PQ58FF3 399 aa18.69■□□□□ 0.58
BPTF-202ENST00000321892 HDAC5Q9UQL6 1122 aa18.69■□□□□ 0.58
BPTF-202ENST00000321892 IPO7O95373 1038 aaKnown RBP18.68■□□□□ 0.58
BPTF-202ENST00000321892 CCDC191Q8NCU4 936 aa18.68■□□□□ 0.58
BPTF-202ENST00000321892 SMC4Q9NTJ3 1288 aa18.68■□□□□ 0.58
BPTF-202ENST00000321892 CCDC39Q9UFE4 941 aa18.67■□□□□ 0.58
BPTF-202ENST00000321892 PES1O00541 588 aaKnown RBP18.67■□□□□ 0.58
BPTF-202ENST00000321892 RDXP35241 583 aaKnown RBP18.67■□□□□ 0.58
BPTF-202ENST00000321892 PODXL2Q9NZ53 605 aa18.67■□□□□ 0.58
BPTF-202ENST00000321892 CDR1P51861 262 aa18.67■□□□□ 0.58
BPTF-202ENST00000321892 DCAF11Q8TEB1 546 aa18.66■□□□□ 0.58
BPTF-202ENST00000321892 HOMER1Q86YM7 354 aa18.66■□□□□ 0.58
BPTF-202ENST00000321892 DCTN1Q14203 1278 aa18.65■□□□□ 0.58
BPTF-202ENST00000321892 ZBED9Q6R2W3 1325 aa18.65■□□□□ 0.58
BPTF-202ENST00000321892 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
BPTF-202ENST00000321892 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
BPTF-202ENST00000321892 DIAPH3Q9NSV4 1193 aa18.65■□□□□ 0.58
BPTF-202ENST00000321892 NASPP49321 788 aaPredicted RBP18.64■□□□□ 0.58
BPTF-202ENST00000321892 KIF15Q9NS87 1388 aa18.64■□□□□ 0.57
BPTF-202ENST00000321892 ANKRD20A12PQ8NF67 263 aa18.64■□□□□ 0.57
BPTF-202ENST00000321892 STK31Q9BXU1 1019 aa18.64■□□□□ 0.57
BPTF-202ENST00000321892 BAZ1AQ9NRL2 1556 aaPredicted RBP18.63■□□□□ 0.57
BPTF-202ENST00000321892 SPAG9O60271 1321 aaKnown RBP18.63■□□□□ 0.57
BPTF-202ENST00000321892 TAF3Q5VWG9 929 aa18.62■□□□□ 0.57
BPTF-202ENST00000321892 EIF4G1Q04637 1599 aaKnown RBP18.62■□□□□ 0.57
BPTF-202ENST00000321892 HOOK1Q9UJC3 728 aaKnown RBP18.62■□□□□ 0.57
BPTF-202ENST00000321892 U2AF1L5P0DN76 240 aaPredicted RBP18.62■□□□□ 0.57
BPTF-202ENST00000321892 U2AF1Q01081 240 aaKnown RBP eCLIP18.62■□□□□ 0.57
BPTF-202ENST00000321892 MNS1Q8NEH6 495 aa18.61■□□□□ 0.57
BPTF-202ENST00000321892 IFT57Q9NWB7 429 aa18.61■□□□□ 0.57
BPTF-202ENST00000321892 H0YHG0 523 aa18.61■□□□□ 0.57
BPTF-202ENST00000321892 SRPK2P78362 688 aaKnown RBP18.6■□□□□ 0.57
BPTF-202ENST00000321892 GORABQ5T7V8 394 aa18.6■□□□□ 0.57
BPTF-202ENST00000321892 REC8O95072 547 aa18.6■□□□□ 0.57
BPTF-202ENST00000321892 HMGN5P82970 282 aaKnown RBP18.59■□□□□ 0.57
BPTF-202ENST00000321892 NLRP13Q86W25 1043 aa18.58■□□□□ 0.57
BPTF-202ENST00000321892 LMOD2Q6P5Q4 547 aa18.57■□□□□ 0.56
BPTF-202ENST00000321892 BAZ1BQ9UIG0 1483 aaKnown RBP18.57■□□□□ 0.56
BPTF-202ENST00000321892 RRP9O43818 475 aaKnown RBP18.56■□□□□ 0.56
BPTF-202ENST00000321892 RAB3GAP2Q9H2M9 1393 aa18.56■□□□□ 0.56
BPTF-202ENST00000321892 TAF7LQ5H9L4 462 aa18.56■□□□□ 0.56
BPTF-202ENST00000321892 KCNH8Q96L42 1107 aa18.55■□□□□ 0.56
BPTF-202ENST00000321892 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
BPTF-202ENST00000321892 MRE11P49959 708 aa18.55■□□□□ 0.56
BPTF-202ENST00000321892 MCTP1Q6DN14 999 aa18.55■□□□□ 0.56
BPTF-202ENST00000321892 LMOD3Q0VAK6 560 aa18.55■□□□□ 0.56
BPTF-202ENST00000321892 RRP1P56182 461 aaKnown RBP18.54■□□□□ 0.56
BPTF-202ENST00000321892 CGNL1Q0VF96 1302 aa18.54■□□□□ 0.56
BPTF-202ENST00000321892 PRKCSHP14314 528 aaPredicted RBP18.54■□□□□ 0.56
BPTF-202ENST00000321892 FAM184AQ8NB25 1140 aa18.54■□□□□ 0.56
BPTF-202ENST00000321892 CHMP5Q9NZZ3 219 aa18.54■□□□□ 0.56
BPTF-202ENST00000321892 LEKR1Q6ZMV7 388 aa18.53■□□□□ 0.56
BPTF-202ENST00000321892 SLC4A3P48751 1232 aa18.53■□□□□ 0.56
BPTF-202ENST00000321892 NAT10Q9H0A0 1025 aaKnown RBP18.52■□□□□ 0.56
BPTF-202ENST00000321892 ERCC4Q92889 916 aaPredicted RBP18.52■□□□□ 0.56
BPTF-202ENST00000321892 CCP110O43303 1012 aa18.51■□□□□ 0.55
BPTF-202ENST00000321892 R3HCC1Q9Y3T6 440 aaKnown RBP18.51■□□□□ 0.55
BPTF-202ENST00000321892 NUCB2P80303 420 aa18.51■□□□□ 0.55
BPTF-202ENST00000321892 CHMP3Q9Y3E7 222 aa18.5■□□□□ 0.55
BPTF-202ENST00000321892 FOXD4L6Q3SYB3 417 aaPredicted RBP18.49■□□□□ 0.55
BPTF-202ENST00000321892 FOXD4L3Q6VB84 417 aaPredicted RBP18.49■□□□□ 0.55
BPTF-202ENST00000321892 AKAP17AQ02040 695 aaKnown RBP18.48■□□□□ 0.55
BPTF-202ENST00000321892 MYO6Q9UM54 1294 aa18.48■□□□□ 0.55
BPTF-202ENST00000321892 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
BPTF-202ENST00000321892 PCMTD1Q96MG8 357 aaPredicted RBP18.48■□□□□ 0.55
BPTF-202ENST00000321892 VPS53Q5VIR6 699 aa18.48■□□□□ 0.55
BPTF-202ENST00000321892 CAGE1Q8TC20 777 aa18.47■□□□□ 0.55
BPTF-202ENST00000321892 BRPF3Q9ULD4 1205 aa18.47■□□□□ 0.55
BPTF-202ENST00000321892 FMN1Q68DA7 1419 aa18.46■□□□□ 0.55
BPTF-202ENST00000321892 BICD2Q8TD16 824 aa18.46■□□□□ 0.55
BPTF-202ENST00000321892 MARCH6O60337 910 aa18.46■□□□□ 0.55
BPTF-202ENST00000321892 SASS6Q6UVJ0 657 aa18.46■□□□□ 0.55
BPTF-202ENST00000321892 RUFY2Q8WXA3 655 aa18.46■□□□□ 0.54
BPTF-202ENST00000321892 CLUAP1Q96AJ1 413 aa18.46■□□□□ 0.54
BPTF-202ENST00000321892 ROCK1Q13464 1354 aa18.45■□□□□ 0.54
BPTF-202ENST00000321892 KIAA0754O94854 1291 aa18.45■□□□□ 0.54
BPTF-202ENST00000321892 CCDC173Q0VFZ6 552 aa18.45■□□□□ 0.54
BPTF-202ENST00000321892 TSPYL1Q9H0U9 437 aa18.45■□□□□ 0.54
BPTF-202ENST00000321892 NFKBIBQ15653 356 aa18.44■□□□□ 0.54
BPTF-202ENST00000321892 LRRFIP1Q32MZ4 808 aaKnown RBP18.44■□□□□ 0.54
BPTF-202ENST00000321892 HSP90AB3PQ58FF7 597 aa18.44■□□□□ 0.54
BPTF-202ENST00000321892 CCDC73Q6ZRK6 1079 aa18.43■□□□□ 0.54
BPTF-202ENST00000321892 CCDC146Q8IYE0 955 aa18.43■□□□□ 0.54
BPTF-202ENST00000321892 INCENPQ9NQS7 918 aa18.43■□□□□ 0.54
BPTF-202ENST00000321892 SOX12O15370 315 aa18.43■□□□□ 0.54
BPTF-202ENST00000321892 ANKRD45Q5TZF3 282 aa18.42■□□□□ 0.54
BPTF-202ENST00000321892 USP8P40818 1118 aa18.42■□□□□ 0.54
BPTF-202ENST00000321892 ZKSCAN1P17029 563 aaPredicted RBP18.42■□□□□ 0.54
BPTF-202ENST00000321892 ZRSR2Q15696 482 aaKnown RBP18.42■□□□□ 0.54
BPTF-202ENST00000321892 SLC4A10Q6U841 1118 aa18.42■□□□□ 0.54
BPTF-202ENST00000321892 RILPL2Q969X0 211 aa18.42■□□□□ 0.54
BPTF-202ENST00000321892 NAP1L1P55209 391 aaKnown RBP18.42■□□□□ 0.54
BPTF-202ENST00000321892 LETM1O95202 739 aaPredicted RBP18.41■□□□□ 0.54
BPTF-202ENST00000321892 DEF6Q9H4E7 631 aa18.41■□□□□ 0.54
BPTF-202ENST00000321892 TOMM22Q9NS69 142 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms