RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 GRIN2BQ13224 1484 aa10.3□□□□□ -0.76
RTL3-201ENST00000321110 ANTXR1Q9H6X2 564 aa10.3□□□□□ -0.76
RTL3-201ENST00000321110 ROCK2O75116 1388 aaKnown RBP10.3□□□□□ -0.76
RTL3-201ENST00000321110 EHBP1L1Q8N3D4 1523 aa10.29□□□□□ -0.76
RTL3-201ENST00000321110 RALBP1Q15311 655 aa10.29□□□□□ -0.76
RTL3-201ENST00000321110 ERBB4Q15303 1308 aa10.29□□□□□ -0.76
RTL3-201ENST00000321110 TCOF1Q13428 1488 aaKnown RBP10.28□□□□□ -0.76
RTL3-201ENST00000321110 MBD5Q9P267 1494 aa10.28□□□□□ -0.76
RTL3-201ENST00000321110 KDM5CP41229 1560 aa10.27□□□□□ -0.76
RTL3-201ENST00000321110 UGGT2Q9NYU1 1516 aa10.27□□□□□ -0.76
RTL3-201ENST00000321110 ZNF326Q5BKZ1 582 aaKnown RBP10.27□□□□□ -0.76
RTL3-201ENST00000321110 PRDM4Q9UKN5 801 aa10.27□□□□□ -0.76
RTL3-201ENST00000321110 SEC24BO95487 1268 aa10.27□□□□□ -0.77
RTL3-201ENST00000321110 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.77
RTL3-201ENST00000321110 ARHGEF11O15085 1522 aa10.27□□□□□ -0.77
RTL3-201ENST00000321110 GAPVD1Q14C86 1478 aa10.27□□□□□ -0.77
RTL3-201ENST00000321110 CENPJQ9HC77 1338 aaPredicted RBP10.26□□□□□ -0.77
RTL3-201ENST00000321110 RBM10P98175 930 aaKnown RBP10.26□□□□□ -0.77
RTL3-201ENST00000321110 NLRP13Q86W25 1043 aa10.26□□□□□ -0.77
RTL3-201ENST00000321110 ESPNB1AK53 854 aa10.26□□□□□ -0.77
RTL3-201ENST00000321110 PDCL3Q9H2J4 239 aa10.26□□□□□ -0.77
RTL3-201ENST00000321110 WDR62O43379 1518 aa10.26□□□□□ -0.77
RTL3-201ENST00000321110 TDRD9Q8NDG6 1382 aaKnown RBP10.26□□□□□ -0.77
RTL3-201ENST00000321110 A0A0U1RQG5 324 aaPredicted RBP10.25□□□□□ -0.77
RTL3-201ENST00000321110 CALD1Q05682 793 aaKnown RBP10.25□□□□□ -0.77
RTL3-201ENST00000321110 BECN1Q14457 450 aa10.24□□□□□ -0.77
RTL3-201ENST00000321110 MAGI3Q5TCQ9 1506 aa10.24□□□□□ -0.77
RTL3-201ENST00000321110 SLC4A1APQ9BWU0 796 aaKnown RBP10.24□□□□□ -0.77
RTL3-201ENST00000321110 PARD3Q8TEW0 1356 aa10.24□□□□□ -0.77
RTL3-201ENST00000321110 NLRP1Q9C000 1473 aa10.24□□□□□ -0.77
RTL3-201ENST00000321110 BLMP54132 1417 aaPredicted RBP10.23□□□□□ -0.77
RTL3-201ENST00000321110 TPM2P07951 284 aa10.23□□□□□ -0.77
RTL3-201ENST00000321110 MCM4P33991 863 aa10.22□□□□□ -0.77
RTL3-201ENST00000321110 MRE11P49959 708 aa10.22□□□□□ -0.77
RTL3-201ENST00000321110 AAMPQ13685 434 aa10.22□□□□□ -0.77
RTL3-201ENST00000321110 KIF14Q15058 1648 aa10.22□□□□□ -0.77
RTL3-201ENST00000321110 MYH16Q9H6N6 1097 aa10.21□□□□□ -0.78
RTL3-201ENST00000321110 ZNF608Q9ULD9 1512 aaPredicted RBP10.21□□□□□ -0.78
RTL3-201ENST00000321110 TBC1D2Q9BYX2 928 aa10.2□□□□□ -0.78
RTL3-201ENST00000321110 ZMYM4Q5VZL5 1548 aa10.2□□□□□ -0.78
RTL3-201ENST00000321110 E9PCH4 1651 aa10.2□□□□□ -0.78
RTL3-201ENST00000321110 ST20-MTHFSA0A0A6YYL1 179 aa10.2□□□□□ -0.78
RTL3-201ENST00000321110 GRPEL1Q9HAV7 217 aa10.2□□□□□ -0.78
RTL3-201ENST00000321110 TRAK2O60296 914 aa10.2□□□□□ -0.78
RTL3-201ENST00000321110 DUSP27Q5VZP5 1158 aa10.2□□□□□ -0.78
RTL3-201ENST00000321110 TARBP1Q13395 1621 aaKnown RBP10.19□□□□□ -0.78
RTL3-201ENST00000321110 PBRM1Q86U86 1689 aa10.19□□□□□ -0.78
RTL3-201ENST00000321110 IGHDP01880 384 aa10.19□□□□□ -0.78
RTL3-201ENST00000321110 CARD11Q9BXL7 1154 aa10.19□□□□□ -0.78
RTL3-201ENST00000321110 INSRP06213 1382 aa10.19□□□□□ -0.78
RTL3-201ENST00000321110 VIRMAQ69YN4 1812 aaKnown RBP10.19□□□□□ -0.78
RTL3-201ENST00000321110 PZPP20742 1482 aa10.18□□□□□ -0.78
RTL3-201ENST00000321110 RALGAPBQ86X10 1494 aa10.18□□□□□ -0.78
RTL3-201ENST00000321110 PLEKHH2Q8IVE3 1493 aa10.18□□□□□ -0.78
RTL3-201ENST00000321110 FGD1P98174 961 aa10.18□□□□□ -0.78
RTL3-201ENST00000321110 KIAA1211Q6ZU35 1233 aa10.18□□□□□ -0.78
RTL3-201ENST00000321110 SPRYD3Q8NCJ5 442 aa10.18□□□□□ -0.78
RTL3-201ENST00000321110 PER1O15534 1290 aaPredicted RBP10.17□□□□□ -0.78
RTL3-201ENST00000321110 PLEKHH1Q9ULM0 1364 aa10.17□□□□□ -0.78
RTL3-201ENST00000321110 EPRSP07814 1512 aaKnown RBP10.17□□□□□ -0.78
RTL3-201ENST00000321110 IQGAP2Q13576 1575 aa10.17□□□□□ -0.78
RTL3-201ENST00000321110 ROCK1Q13464 1354 aa10.17□□□□□ -0.78
RTL3-201ENST00000321110 UHRF1BP1Q6BDS2 1440 aa10.17□□□□□ -0.78
RTL3-201ENST00000321110 IFT140Q96RY7 1462 aa10.16□□□□□ -0.78
RTL3-201ENST00000321110 RIPK4P57078 832 aa10.16□□□□□ -0.78
RTL3-201ENST00000321110 TBC1D32Q96NH3 1257 aa10.16□□□□□ -0.78
RTL3-201ENST00000321110 EIF3AQ14152 1382 aaKnown RBP10.16□□□□□ -0.78
RTL3-201ENST00000321110 DAPK1P53355 1430 aa10.15□□□□□ -0.78
RTL3-201ENST00000321110 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.15□□□□□ -0.78
RTL3-201ENST00000321110 TRIM44Q96DX7 344 aaPredicted RBP10.15□□□□□ -0.78
RTL3-201ENST00000321110 CDK13Q14004 1512 aaKnown RBP10.15□□□□□ -0.78
RTL3-201ENST00000321110 CC2D1BQ5T0F9 858 aaKnown RBP10.15□□□□□ -0.79
RTL3-201ENST00000321110 GAS2L3Q86XJ1 694 aa10.15□□□□□ -0.79
RTL3-201ENST00000321110 ADAMTS12P58397 1594 aa10.14□□□□□ -0.79
RTL3-201ENST00000321110 ADAMTS8Q9UP79 889 aa10.14□□□□□ -0.79
RTL3-201ENST00000321110 ZNF521Q96K83 1311 aa10.14□□□□□ -0.79
RTL3-201ENST00000321110 ABCC5O15440 1437 aa10.13□□□□□ -0.79
RTL3-201ENST00000321110 MAPK8IP3Q9UPT6 1336 aa10.13□□□□□ -0.79
RTL3-201ENST00000321110 EIF4G3O43432 1585 aaKnown RBP10.13□□□□□ -0.79
RTL3-201ENST00000321110 KIAA1107Q9UPP5 1409 aa10.13□□□□□ -0.79
RTL3-201ENST00000321110 CHMP5Q9NZZ3 219 aa10.13□□□□□ -0.79
RTL3-201ENST00000321110 ISY1Q9ULR0 285 aaKnown RBP10.13□□□□□ -0.79
RTL3-201ENST00000321110 OFD1O75665 1012 aa10.12□□□□□ -0.79
RTL3-201ENST00000321110 BCAR3O75815 825 aa10.12□□□□□ -0.79
RTL3-201ENST00000321110 GOLGA2Q08379 1002 aa10.11□□□□□ -0.79
RTL3-201ENST00000321110 FBLN2P98095 1184 aa10.11□□□□□ -0.79
RTL3-201ENST00000321110 PKD2Q13563 968 aa10.11□□□□□ -0.79
RTL3-201ENST00000321110 UPF2Q9HAU5 1272 aaKnown RBP10.11□□□□□ -0.79
RTL3-201ENST00000321110 ZNF644Q9H582 1327 aaPredicted RBP10.1□□□□□ -0.79
RTL3-201ENST00000321110 DNMT1P26358 1616 aaKnown RBP10.1□□□□□ -0.79
RTL3-201ENST00000321110 PDE4CQ08493 712 aa10.1□□□□□ -0.79
RTL3-201ENST00000321110 SLFN5Q08AF3 891 aa10.1□□□□□ -0.79
RTL3-201ENST00000321110 ZNF692Q9BU19 519 aaPredicted RBP10.1□□□□□ -0.79
RTL3-201ENST00000321110 FAM13BQ9NYF5 915 aa10.1□□□□□ -0.79
RTL3-201ENST00000321110 KDM2AQ9Y2K7 1162 aa10.1□□□□□ -0.79
RTL3-201ENST00000321110 DDX11L8A8MPP1 907 aa10.09□□□□□ -0.79
RTL3-201ENST00000321110 SPINK5Q9NQ38 1064 aaPredicted RBP10.09□□□□□ -0.79
RTL3-201ENST00000321110 ZSCAN30Q86W11 494 aa10.08□□□□□ -0.8
RTL3-201ENST00000321110 SMAP1Q8IYB5 467 aaPredicted RBP10.08□□□□□ -0.8
RTL3-201ENST00000321110 TRMT2AQ8IZ69 625 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms