RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 DDX49Q9Y6V7 483 aaKnown RBP20.81■□□□□ 0.92
SMCHD1-201ENST00000320876 FAM161AQ3B820 660 aa20.79■□□□□ 0.92
SMCHD1-201ENST00000320876 NOL8Q76FK4 1167 aaKnown RBP20.79■□□□□ 0.92
SMCHD1-201ENST00000320876 TMX4Q9H1E5 349 aaPredicted RBP20.78■□□□□ 0.92
SMCHD1-201ENST00000320876 CHMP3Q9Y3E7 222 aa20.78■□□□□ 0.92
SMCHD1-201ENST00000320876 NACADO15069 1562 aa20.78■□□□□ 0.92
SMCHD1-201ENST00000320876 VPS8Q8N3P4 1428 aa20.77■□□□□ 0.92
SMCHD1-201ENST00000320876 LMOD3Q0VAK6 560 aa20.76■□□□□ 0.91
SMCHD1-201ENST00000320876 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
SMCHD1-201ENST00000320876 RRP12Q5JTH9 1297 aaKnown RBP20.76■□□□□ 0.91
SMCHD1-201ENST00000320876 TAF7LQ5H9L4 462 aa20.76■□□□□ 0.91
SMCHD1-201ENST00000320876 IPO7O95373 1038 aaKnown RBP20.75■□□□□ 0.91
SMCHD1-201ENST00000320876 PATL2C9JE40 543 aaKnown RBP20.75■□□□□ 0.91
SMCHD1-201ENST00000320876 MTERF4Q7Z6M4 381 aaKnown RBP20.74■□□□□ 0.91
SMCHD1-201ENST00000320876 ZNF592Q92610 1267 aa20.74■□□□□ 0.91
SMCHD1-201ENST00000320876 KIF15Q9NS87 1388 aa20.74■□□□□ 0.91
SMCHD1-201ENST00000320876 FOXD4L5Q5VV16 416 aaPredicted RBP20.73■□□□□ 0.91
SMCHD1-201ENST00000320876 FOXD4L4Q8WXT5 416 aaPredicted RBP20.73■□□□□ 0.91
SMCHD1-201ENST00000320876 AK7Q96M32 723 aa20.72■□□□□ 0.91
SMCHD1-201ENST00000320876 HOOK1Q9UJC3 728 aaKnown RBP20.72■□□□□ 0.91
SMCHD1-201ENST00000320876 FAM184AQ8NB25 1140 aa20.72■□□□□ 0.91
SMCHD1-201ENST00000320876 SAFB2Q14151 953 aaKnown RBP eCLIP20.72■□□□□ 0.912e-6■■□□□ 12.6
SMCHD1-201ENST00000320876 ANKRD20A12PQ8NF67 263 aa20.72■□□□□ 0.91
SMCHD1-201ENST00000320876 FAM13BQ9NYF5 915 aa20.72■□□□□ 0.91
SMCHD1-201ENST00000320876 ARGLU1Q9NWB6 273 aaPredicted RBP20.71■□□□□ 0.91
SMCHD1-201ENST00000320876 NLRP13Q86W25 1043 aa20.71■□□□□ 0.91
SMCHD1-201ENST00000320876 ACBD3Q9H3P7 528 aa20.7■□□□□ 0.9
SMCHD1-201ENST00000320876 FANCIQ9NVI1 1328 aa20.7■□□□□ 0.9
SMCHD1-201ENST00000320876 RAB3GAP2Q9H2M9 1393 aa20.69■□□□□ 0.9
SMCHD1-201ENST00000320876 RUFY1Q96T51 708 aa20.69■□□□□ 0.9
SMCHD1-201ENST00000320876 CWC15Q9P013 229 aaKnown RBP20.68■□□□□ 0.9
SMCHD1-201ENST00000320876 VPS53Q5VIR6 699 aa20.68■□□□□ 0.9
SMCHD1-201ENST00000320876 MARCH6O60337 910 aa20.68■□□□□ 0.9
SMCHD1-201ENST00000320876 ERCC6Q03468 1493 aa20.67■□□□□ 0.9
SMCHD1-201ENST00000320876 HOMER1Q86YM7 354 aa20.67■□□□□ 0.9
SMCHD1-201ENST00000320876 CDR1P51861 262 aa20.67■□□□□ 0.9
SMCHD1-201ENST00000320876 FAM43AQ8N2R8 423 aa20.67■□□□□ 0.9
SMCHD1-201ENST00000320876 SLC4A10Q6U841 1118 aa20.67■□□□□ 0.9
SMCHD1-201ENST00000320876 ZNF330Q9Y3S2 320 aaPredicted RBP20.67■□□□□ 0.9
SMCHD1-201ENST00000320876 PDE4AP27815 886 aa20.67■□□□□ 0.9
SMCHD1-201ENST00000320876 REC8O95072 547 aa20.66■□□□□ 0.9
SMCHD1-201ENST00000320876 TERF2IPQ9NYB0 399 aa20.66■□□□□ 0.9
SMCHD1-201ENST00000320876 AKAP17AQ02040 695 aaKnown RBP20.66■□□□□ 0.9
SMCHD1-201ENST00000320876 FMN1Q68DA7 1419 aa20.65■□□□□ 0.9
SMCHD1-201ENST00000320876 PKD2Q13563 968 aa20.65■□□□□ 0.9
SMCHD1-201ENST00000320876 LRRFIP1Q32MZ4 808 aaKnown RBP20.65■□□□□ 0.9
SMCHD1-201ENST00000320876 MAP7D2Q96T17 732 aa20.65■□□□□ 0.9
SMCHD1-201ENST00000320876 HSP90B2PQ58FF3 399 aa20.64■□□□□ 0.89
SMCHD1-201ENST00000320876 PAK3O75914 559 aaPredicted RBP20.63■□□□□ 0.89
SMCHD1-201ENST00000320876 ZBED9Q6R2W3 1325 aa20.63■□□□□ 0.89
SMCHD1-201ENST00000320876 CLUAP1Q96AJ1 413 aa20.63■□□□□ 0.89
SMCHD1-201ENST00000320876 MCTP1Q6DN14 999 aa20.62■□□□□ 0.89
SMCHD1-201ENST00000320876 STK26Q9P289 416 aa20.62■□□□□ 0.89
SMCHD1-201ENST00000320876 TOMM22Q9NS69 142 aa20.62■□□□□ 0.89
SMCHD1-201ENST00000320876 MYBBP1AQ9BQG0 1328 aaKnown RBP20.62■□□□□ 0.89
SMCHD1-201ENST00000320876 RILPL2Q969X0 211 aa20.6■□□□□ 0.89
SMCHD1-201ENST00000320876 CCDC146Q8IYE0 955 aa20.6■□□□□ 0.89
SMCHD1-201ENST00000320876 PCMTD1Q96MG8 357 aaPredicted RBP20.59■□□□□ 0.89
SMCHD1-201ENST00000320876 ANKRD30AQ9BXX3 1397 aa20.59■□□□□ 0.89
SMCHD1-201ENST00000320876 DCTN1Q14203 1278 aa20.59■□□□□ 0.89
SMCHD1-201ENST00000320876 ROCK1Q13464 1354 aa20.59■□□□□ 0.89
SMCHD1-201ENST00000320876 ANKRD45Q5TZF3 282 aa20.58■□□□□ 0.89
SMCHD1-201ENST00000320876 TRIM29Q14134 588 aa20.58■□□□□ 0.89
SMCHD1-201ENST00000320876 RUFY2Q8WXA3 655 aa20.58■□□□□ 0.89
SMCHD1-201ENST00000320876 CCDC66A2RUB6 948 aa20.58■□□□□ 0.88
SMCHD1-201ENST00000320876 DIAPH3Q9NSV4 1193 aa20.58■□□□□ 0.88
SMCHD1-201ENST00000320876 CGNL1Q0VF96 1302 aa20.58■□□□□ 0.88
SMCHD1-201ENST00000320876 NUP155O75694 1391 aa20.57■□□□□ 0.88
SMCHD1-201ENST00000320876 CSB-PGBD3P0DP91 1061 aa20.57■□□□□ 0.88
SMCHD1-201ENST00000320876 SYNE3Q6ZMZ3 975 aa20.57■□□□□ 0.88
SMCHD1-201ENST00000320876 RRP1P56182 461 aaKnown RBP20.57■□□□□ 0.88
SMCHD1-201ENST00000320876 FOXD4L6Q3SYB3 417 aaPredicted RBP20.57■□□□□ 0.88
SMCHD1-201ENST00000320876 FOXD4L3Q6VB84 417 aaPredicted RBP20.57■□□□□ 0.88
SMCHD1-201ENST00000320876 CCDC191Q8NCU4 936 aa20.56■□□□□ 0.88
SMCHD1-201ENST00000320876 CCDC47Q96A33 483 aaKnown RBP20.56■□□□□ 0.88
SMCHD1-201ENST00000320876 NAT10Q9H0A0 1025 aaKnown RBP20.56■□□□□ 0.88
SMCHD1-201ENST00000320876 IFT57Q9NWB7 429 aa20.56■□□□□ 0.88
SMCHD1-201ENST00000320876 TCEAL9Q9UHQ7 104 aa20.56■□□□□ 0.88
SMCHD1-201ENST00000320876 ZKSCAN1P17029 563 aaPredicted RBP20.56■□□□□ 0.88
SMCHD1-201ENST00000320876 MPHOSPH9Q99550 1183 aa20.56■□□□□ 0.88
SMCHD1-201ENST00000320876 CUX2O14529 1486 aa20.56■□□□□ 0.88
SMCHD1-201ENST00000320876 FOXD1Q16676 465 aa20.56■□□□□ 0.88
SMCHD1-201ENST00000320876 CCDC39Q9UFE4 941 aa20.55■□□□□ 0.88
SMCHD1-201ENST00000320876 CPLX2Q6PUV4 134 aaKnown RBP20.55■□□□□ 0.88
SMCHD1-201ENST00000320876 G3V3G9 751 aa20.55■□□□□ 0.88
SMCHD1-201ENST00000320876 DCAF8Q5TAQ9 597 aa20.55■□□□□ 0.88
SMCHD1-201ENST00000320876 MNS1Q8NEH6 495 aa20.55■□□□□ 0.88
SMCHD1-201ENST00000320876 E9PSI1 815 aa20.55■□□□□ 0.88
SMCHD1-201ENST00000320876 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
SMCHD1-201ENST00000320876 RDXP35241 583 aaKnown RBP20.54■□□□□ 0.88
SMCHD1-201ENST00000320876 CARMIL1Q5VZK9 1371 aa20.54■□□□□ 0.88
SMCHD1-201ENST00000320876 SASS6Q6UVJ0 657 aa20.54■□□□□ 0.88
SMCHD1-201ENST00000320876 FRAT2O75474 233 aaPredicted RBP20.53■□□□□ 0.88
SMCHD1-201ENST00000320876 ZKSCAN2Q63HK3 967 aa20.52■□□□□ 0.88
SMCHD1-201ENST00000320876 CHMP5Q9NZZ3 219 aa20.52■□□□□ 0.88
SMCHD1-201ENST00000320876 APPP05067 770 aa20.52■□□□□ 0.88
SMCHD1-201ENST00000320876 NUCB2P80303 420 aa20.52■□□□□ 0.88
SMCHD1-201ENST00000320876 BICD2Q8TD16 824 aa20.52■□□□□ 0.88
SMCHD1-201ENST00000320876 CCDC18Q5T9S5 1454 aa20.52■□□□□ 0.88
SMCHD1-201ENST00000320876 NASPP49321 788 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms