RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 POTEFA5A3E0 1075 aa5.2□□□□□ -1.58
SCAMP1-201ENST00000320280 CABP2Q9NPB3 220 aa5.2□□□□□ -1.58
SCAMP1-201ENST00000320280 PLEKHH2Q8IVE3 1493 aa5.2□□□□□ -1.58
SCAMP1-201ENST00000320280 TEX14Q8IWB6 1497 aa5.2□□□□□ -1.58
SCAMP1-201ENST00000320280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCAMP1-201ENST00000320280 SLAIN1Q8ND83 568 aa5.19□□□□□ -1.58
SCAMP1-201ENST00000320280 ABCC10Q5T3U5 1492 aa5.19□□□□□ -1.58
SCAMP1-201ENST00000320280 MKRN3Q13064 507 aaKnown RBP5.19□□□□□ -1.58
SCAMP1-201ENST00000320280 SPOCK2Q92563 424 aa5.19□□□□□ -1.58
SCAMP1-201ENST00000320280 CDC42BPAQ5VT25 1732 aa5.19□□□□□ -1.58
SCAMP1-201ENST00000320280 LRRC9Q6ZRR7 1453 aa5.19□□□□□ -1.58
SCAMP1-201ENST00000320280 NEO1Q92859 1461 aa5.19□□□□□ -1.58
SCAMP1-201ENST00000320280 MIA2Q96PC5 1412 aa5.18□□□□□ -1.58
SCAMP1-201ENST00000320280 ARHGEF5Q12774 1597 aa5.18□□□□□ -1.58
SCAMP1-201ENST00000320280 POTEMA6NI47 508 aa5.18□□□□□ -1.58
SCAMP1-201ENST00000320280 MAST1Q9Y2H9 1570 aa5.18□□□□□ -1.58
SCAMP1-201ENST00000320280 ACIN1Q9UKV3 1341 aaKnown RBP5.17□□□□□ -1.58
SCAMP1-201ENST00000320280 CROCC2H7BZ55 1655 aa5.17□□□□□ -1.58
SCAMP1-201ENST00000320280 GSE1Q14687 1217 aa5.17□□□□□ -1.58
SCAMP1-201ENST00000320280 POTEGQ6S5H5 508 aa5.17□□□□□ -1.58
SCAMP1-201ENST00000320280 FAM135AQ9P2D6 1515 aa5.17□□□□□ -1.58
SCAMP1-201ENST00000320280 PPRC1Q5VV67 1664 aaKnown RBP5.17□□□□□ -1.58
SCAMP1-201ENST00000320280 TCOF1Q13428 1488 aaKnown RBP5.17□□□□□ -1.58
SCAMP1-201ENST00000320280 ASXL2Q76L83 1435 aa5.16□□□□□ -1.58
SCAMP1-201ENST00000320280 PSEN1P49768 467 aa5.16□□□□□ -1.58
SCAMP1-201ENST00000320280 MARVELD3Q96A59 401 aa5.16□□□□□ -1.58
SCAMP1-201ENST00000320280 BCORL1Q5H9F3 1711 aa5.16□□□□□ -1.58
SCAMP1-201ENST00000320280 CDC42BPBQ9Y5S2 1711 aa5.16□□□□□ -1.58
SCAMP1-201ENST00000320280 ADGBQ8N7X0 1667 aa5.16□□□□□ -1.58
SCAMP1-201ENST00000320280 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.16□□□□□ -1.58
SCAMP1-201ENST00000320280 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.16□□□□□ -1.585e-8■□□□□ 9.7
SCAMP1-201ENST00000320280 REREQ9P2R6 1566 aa5.16□□□□□ -1.58
SCAMP1-201ENST00000320280 ZMYM4Q5VZL5 1548 aa5.16□□□□□ -1.58
SCAMP1-201ENST00000320280 SHANK2Q9UPX8 1470 aa5.16□□□□□ -1.58
SCAMP1-201ENST00000320280 CDK13Q14004 1512 aaKnown RBP5.15□□□□□ -1.58
SCAMP1-201ENST00000320280 KIAA1107Q9UPP5 1409 aa5.15□□□□□ -1.59
SCAMP1-201ENST00000320280 TTC37Q6PGP7 1564 aa5.15□□□□□ -1.59
SCAMP1-201ENST00000320280 DPY19L2Q6NUT2 758 aa5.15□□□□□ -1.59
SCAMP1-201ENST00000320280 ZNF467Q7Z7K2 595 aaPredicted RBP5.14□□□□□ -1.59
SCAMP1-201ENST00000320280 C3orf67Q6ZVT6 689 aa5.14□□□□□ -1.59
SCAMP1-201ENST00000320280 PLXNC1O60486 1568 aa5.14□□□□□ -1.59
SCAMP1-201ENST00000320280 ABCC1P33527 1531 aa5.14□□□□□ -1.59
SCAMP1-201ENST00000320280 KDM5CP41229 1560 aa5.14□□□□□ -1.59
SCAMP1-201ENST00000320280 PLCH2O75038 1416 aa5.14□□□□□ -1.59
SCAMP1-201ENST00000320280 AKNAQ7Z591 1439 aa5.14□□□□□ -1.59
SCAMP1-201ENST00000320280 G3V3G9 751 aa5.14□□□□□ -1.59
SCAMP1-201ENST00000320280 MAGI2Q86UL8 1455 aa5.14□□□□□ -1.59
SCAMP1-201ENST00000320280 DNMT1P26358 1616 aaKnown RBP5.13□□□□□ -1.59
SCAMP1-201ENST00000320280 EIF2AK4Q9P2K8 1649 aaKnown RBP5.13□□□□□ -1.59
SCAMP1-201ENST00000320280 RICTORQ6R327 1708 aa5.13□□□□□ -1.59
SCAMP1-201ENST00000320280 NCOA2Q15596 1464 aa5.13□□□□□ -1.59
SCAMP1-201ENST00000320280 MYOM3Q5VTT5 1437 aa5.13□□□□□ -1.59
SCAMP1-201ENST00000320280 MTUS2Q5JR59 1369 aa5.13□□□□□ -1.59
SCAMP1-201ENST00000320280 PTPN23Q9H3S7 1636 aa5.13□□□□□ -1.59
SCAMP1-201ENST00000320280 PLEKHD1A6NEE1 506 aa5.13□□□□□ -1.59
SCAMP1-201ENST00000320280 RRBP1Q9P2E9 1410 aaKnown RBP5.13□□□□□ -1.59
SCAMP1-201ENST00000320280 MAMSTRQ6ZN01 415 aa5.12□□□□□ -1.59
SCAMP1-201ENST00000320280 RSPH4AQ5TD94 716 aa5.12□□□□□ -1.59
SCAMP1-201ENST00000320280 INO80Q9ULG1 1556 aaPredicted RBP5.12□□□□□ -1.59
SCAMP1-201ENST00000320280 GCC2Q8IWJ2 1684 aa5.11□□□□□ -1.59
SCAMP1-201ENST00000320280 OCEL1Q9H607 264 aa5.11□□□□□ -1.59
SCAMP1-201ENST00000320280 RTEL1-TNFRSF6BF6WH68 1400 aa5.11□□□□□ -1.59
SCAMP1-201ENST00000320280 SAMD9LQ8IVG5 1584 aa5.11□□□□□ -1.59
SCAMP1-201ENST00000320280 GPATCH8Q9UKJ3 1502 aaKnown RBP5.11□□□□□ -1.59
SCAMP1-201ENST00000320280 ADGRL2O95490 1459 aa5.11□□□□□ -1.59
SCAMP1-201ENST00000320280 HECW2Q9P2P5 1572 aa5.1□□□□□ -1.59
SCAMP1-201ENST00000320280 LOC105371045A0A1W2PR82 267 aa5.1□□□□□ -1.59
SCAMP1-201ENST00000320280 PDAP1Q13442 181 aaKnown RBP5.1□□□□□ -1.59
SCAMP1-201ENST00000320280 ZNF518AQ6AHZ1 1483 aa5.1□□□□□ -1.59
SCAMP1-201ENST00000320280 ARHGAP5Q13017 1502 aa5.1□□□□□ -1.59
SCAMP1-201ENST00000320280 SGIP1Q9BQI5 828 aa5.1□□□□□ -1.59
SCAMP1-201ENST00000320280 ZC3H13Q5T200 1668 aaKnown RBP5.1□□□□□ -1.59
SCAMP1-201ENST00000320280 CCNB3Q8WWL7 1395 aa5.1□□□□□ -1.59
SCAMP1-201ENST00000320280 CD109Q6YHK3 1445 aa5.1□□□□□ -1.59
SCAMP1-201ENST00000320280 FGD6Q6ZV73 1430 aa5.1□□□□□ -1.59
SCAMP1-201ENST00000320280 EFCAB3Q8N7B9 438 aa5.09□□□□□ -1.59
SCAMP1-201ENST00000320280 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.09□□□□□ -1.59
SCAMP1-201ENST00000320280 MLH3Q9UHC1 1453 aa5.09□□□□□ -1.59
SCAMP1-201ENST00000320280 ARHGEF40Q8TER5 1519 aa5.09□□□□□ -1.59
SCAMP1-201ENST00000320280 FANCAO15360 1455 aa5.09□□□□□ -1.59
SCAMP1-201ENST00000320280 CAMSAP2Q08AD1 1489 aa5.09□□□□□ -1.59
SCAMP1-201ENST00000320280 CCDC141Q6ZP82 1450 aa5.09□□□□□ -1.59
SCAMP1-201ENST00000320280 FRMPD1Q5SYB0 1578 aa5.09□□□□□ -1.6
SCAMP1-201ENST00000320280 ROCK1Q13464 1354 aa5.08□□□□□ -1.6
SCAMP1-201ENST00000320280 AGLP35573 1532 aa5.08□□□□□ -1.6
SCAMP1-201ENST00000320280 POGZQ7Z3K3 1410 aa5.08□□□□□ -1.6
SCAMP1-201ENST00000320280 IRX5P78411 483 aaPredicted RBP5.08□□□□□ -1.6
SCAMP1-201ENST00000320280 KDM6BO15054 1643 aa5.08□□□□□ -1.6
SCAMP1-201ENST00000320280 CYB5RLQ6IPT4 315 aa5.08□□□□□ -1.6
SCAMP1-201ENST00000320280 RNF17Q9BXT8 1623 aaKnown RBP5.07□□□□□ -1.6
SCAMP1-201ENST00000320280 STK24Q9Y6E0 443 aa5.07□□□□□ -1.6
SCAMP1-201ENST00000320280 DEPDC5O75140 1603 aa5.07□□□□□ -1.6
SCAMP1-201ENST00000320280 MROH2AA6NES4 1674 aa5.07□□□□□ -1.6
SCAMP1-201ENST00000320280 STK25O00506 426 aa5.07□□□□□ -1.6
SCAMP1-201ENST00000320280 ECM2O94769 699 aaPredicted RBP5.07□□□□□ -1.6
SCAMP1-201ENST00000320280 ZFYVE16Q7Z3T8 1539 aa5.07□□□□□ -1.6
SCAMP1-201ENST00000320280 DENND4BO75064 1496 aaPredicted RBP5.07□□□□□ -1.6
SCAMP1-201ENST00000320280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.07□□□□□ -1.6
SCAMP1-201ENST00000320280 ZFP91Q96JP5 570 aaPredicted RBP5.07□□□□□ -1.6
SCAMP1-201ENST00000320280 ADGRL1O94910 1474 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms