RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 FAM135AQ9P2D6 1515 aa45.73■■■■■ 4.91
NECTIN3-201ENST00000319792 A2MP01023 1474 aa45.72■■■■■ 4.91
NECTIN3-201ENST00000319792 DIP2CQ9Y2E4 1556 aa45.71■■■■■ 4.91
NECTIN3-201ENST00000319792 BCORL1Q5H9F3 1711 aa45.68■■■■■ 4.9
NECTIN3-201ENST00000319792 SIN3AQ96ST3 1273 aa45.64■■■■■ 4.9
NECTIN3-201ENST00000319792 ANKRD30BQ9BXX2 1392 aa45.63■■■■■ 4.9
NECTIN3-201ENST00000319792 RNF17Q9BXT8 1623 aaKnown RBP45.6■■■■■ 4.89
NECTIN3-201ENST00000319792 PRDM15P57071 1507 aaPredicted RBP45.59■■■■■ 4.89
NECTIN3-201ENST00000319792 MROH1Q8NDA8 1641 aa45.58■■■■■ 4.89
NECTIN3-201ENST00000319792 VWDEQ8N2E2 1590 aa45.58■■■■■ 4.89
NECTIN3-201ENST00000319792 COL17A1Q9UMD9 1497 aaPredicted RBP45.57■■■■■ 4.88
NECTIN3-201ENST00000319792 TIMELESSQ9UNS1 1208 aa45.57■■■■■ 4.88
NECTIN3-201ENST00000319792 PKD2Q13563 968 aa45.56■■■■■ 4.88
NECTIN3-201ENST00000319792 YEATS2Q9ULM3 1422 aa45.55■■■■■ 4.88
NECTIN3-201ENST00000319792 FOXD1Q16676 465 aa45.55■■■■■ 4.88
NECTIN3-201ENST00000319792 NEUROD1Q13562 356 aa45.51■■■■■ 4.88
NECTIN3-201ENST00000319792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP45.5■■■■■ 4.87
NECTIN3-201ENST00000319792 KIF3BO15066 747 aa45.49■■■■■ 4.87
NECTIN3-201ENST00000319792 REREQ9P2R6 1566 aa45.47■■■■■ 4.87
NECTIN3-201ENST00000319792 TET3O43151 1660 aa45.45■■■■■ 4.87
NECTIN3-201ENST00000319792 RPRD2Q5VT52 1461 aaKnown RBP45.43■■■■■ 4.86
NECTIN3-201ENST00000319792 KANK1Q14678 1352 aa45.42■■■■■ 4.86
NECTIN3-201ENST00000319792 ATP10AO60312 1499 aa45.41■■■■■ 4.86
NECTIN3-201ENST00000319792 ARHGEF40Q8TER5 1519 aa45.41■■■■■ 4.86
NECTIN3-201ENST00000319792 TRHP20396 242 aaPredicted RBP45.39■■■■■ 4.86
NECTIN3-201ENST00000319792 E9PCH4 1651 aa45.36■■■■■ 4.85
NECTIN3-201ENST00000319792 TONSLQ96HA7 1378 aa45.36■■■■■ 4.85
NECTIN3-201ENST00000319792 LMTK2Q8IWU2 1503 aa45.36■■■■■ 4.85
NECTIN3-201ENST00000319792 CEP152O94986 1710 aa45.3■■■■■ 4.84
NECTIN3-201ENST00000319792 AGLP35573 1532 aa45.3■■■■■ 4.84
NECTIN3-201ENST00000319792 EFCAB6Q5THR3 1501 aa45.25■■■■■ 4.83
NECTIN3-201ENST00000319792 PLA2R1Q13018 1463 aa45.24■■■■■ 4.83
NECTIN3-201ENST00000319792 ZC3H13Q5T200 1668 aaKnown RBP45.21■■■■■ 4.83
NECTIN3-201ENST00000319792 ABCC3O15438 1527 aa45.2■■■■■ 4.83
NECTIN3-201ENST00000319792 SPHKAPQ2M3C7 1700 aa45.19■■■■■ 4.82
NECTIN3-201ENST00000319792 SIGLEC1Q9BZZ2 1709 aa45.18■■■■■ 4.82
NECTIN3-201ENST00000319792 PPP1R15AO75807 674 aaPredicted RBP45.17■■■■■ 4.82
NECTIN3-201ENST00000319792 GGT6Q6P531 493 aa45.14■■■■■ 4.82
NECTIN3-201ENST00000319792 PTPRTO14522 1441 aa45.14■■■■■ 4.82
NECTIN3-201ENST00000319792 TRPM2O94759 1503 aa45.13■■■■■ 4.82
NECTIN3-201ENST00000319792 CCDC144AA2RUR9 1427 aa45.12■■■■■ 4.81
NECTIN3-201ENST00000319792 CAMSAP1Q5T5Y3 1602 aa45.11■■■■■ 4.81
NECTIN3-201ENST00000319792 L3MBTL2Q969R5 705 aa45.05■■■■■ 4.8
NECTIN3-201ENST00000319792 WASHC2CQ9Y4E1 1318 aa45.01■■■■■ 4.8
NECTIN3-201ENST00000319792 NPATQ14207 1427 aa44.98■■■■■ 4.79
NECTIN3-201ENST00000319792 ARHGAP31Q2M1Z3 1444 aa44.97■■■■■ 4.79
NECTIN3-201ENST00000319792 PPP6R1Q9UPN7 881 aa44.96■■■■■ 4.79
NECTIN3-201ENST00000319792 CLTCL1P53675 1640 aa44.96■■■■■ 4.79
NECTIN3-201ENST00000319792 NEURL4Q96JN8 1562 aa44.87■■■■■ 4.77
NECTIN3-201ENST00000319792 CNTLNQ9NXG0 1405 aa44.85■■■■■ 4.77
NECTIN3-201ENST00000319792 CFAP65Q6ZU64 1925 aaKnown RBP44.84■■■■■ 4.77
NECTIN3-201ENST00000319792 CLTCQ00610 1675 aaKnown RBP44.84■■■■■ 4.77
NECTIN3-201ENST00000319792 SPATA31E1Q6ZUB1 1445 aa44.83■■■■■ 4.77
NECTIN3-201ENST00000319792 NOS1P29475 1434 aa44.82■■■■■ 4.76
NECTIN3-201ENST00000319792 ZNF316A6NFI3 1004 aaPredicted RBP44.8■■■■■ 4.76
NECTIN3-201ENST00000319792 KIF1BO60333 1816 aa44.79■■■■■ 4.76
NECTIN3-201ENST00000319792 UHRF1BP1Q6BDS2 1440 aa44.78■■■■■ 4.76
NECTIN3-201ENST00000319792 PREX1Q8TCU6 1659 aa44.76■■■■■ 4.76
NECTIN3-201ENST00000319792 UGGT1Q9NYU2 1555 aa44.76■■■■■ 4.76
NECTIN3-201ENST00000319792 PIK3C2BO00750 1634 aa44.74■■■■■ 4.75
NECTIN3-201ENST00000319792 SYNMO15061 1565 aa44.74■■■■■ 4.75
NECTIN3-201ENST00000319792 NBPF8Q3BBV2 869 aa44.7■■■■■ 4.75
NECTIN3-201ENST00000319792 MLECQ14165 292 aa44.65■■■■■ 4.74
NECTIN3-201ENST00000319792 ARID4BQ4LE39 1312 aaPredicted RBP44.64■■■■■ 4.74
NECTIN3-201ENST00000319792 ADGRB3O60242 1522 aa44.64■■■■■ 4.74
NECTIN3-201ENST00000319792 MROH2AA6NES4 1674 aa44.64■■■■■ 4.74
NECTIN3-201ENST00000319792 DCAF11Q8TEB1 546 aa44.63■■■■■ 4.73
NECTIN3-201ENST00000319792 ERVK-7P63135 1459 aa44.62■■■■■ 4.73
NECTIN3-201ENST00000319792 RGL3Q3MIN7 710 aa44.61■■■■■ 4.73
NECTIN3-201ENST00000319792 SPATA31D1Q6ZQQ2 1576 aa44.58■■■■■ 4.73
NECTIN3-201ENST00000319792 PRAG1Q86YV5 1406 aa44.57■■■■■ 4.73
NECTIN3-201ENST00000319792 RALGAPBQ86X10 1494 aa44.57■■■■■ 4.73
NECTIN3-201ENST00000319792 IFT172Q9UG01 1749 aa44.57■■■■■ 4.73
NECTIN3-201ENST00000319792 STAC3Q96MF2 364 aa44.52■■■■■ 4.72
NECTIN3-201ENST00000319792 KDM2AQ9Y2K7 1162 aa44.52■■■■■ 4.72
NECTIN3-201ENST00000319792 TRPM1Q7Z4N2 1603 aa44.51■■■■■ 4.72
NECTIN3-201ENST00000319792 ESF1Q9H501 851 aaKnown RBP44.5■■■■■ 4.71
NECTIN3-201ENST00000319792 SLC52A1Q9NWF4 448 aa44.49■■■■■ 4.71
NECTIN3-201ENST00000319792 MADDQ8WXG6 1647 aa44.48■■■■■ 4.71
NECTIN3-201ENST00000319792 FER1L4A9Z1Z3 1794 aa44.48■■■■■ 4.71
NECTIN3-201ENST00000319792 ZMYM3Q14202 1370 aa44.48■■■■■ 4.71
NECTIN3-201ENST00000319792 ZNF326Q5BKZ1 582 aaKnown RBP44.46■■■■■ 4.71
NECTIN3-201ENST00000319792 MYOM2P54296 1465 aa44.45■■■■■ 4.71
NECTIN3-201ENST00000319792 FBXO31Q5XUX0 539 aaPredicted RBP44.44■■■■■ 4.7
NECTIN3-201ENST00000319792 PPLO60437 1756 aa44.43■■■■■ 4.7
NECTIN3-201ENST00000319792 TMEM131LA2VDJ0 1609 aa44.39■■■■■ 4.7
NECTIN3-201ENST00000319792 IDI1Q13907 227 aa44.38■■■■■ 4.69
NECTIN3-201ENST00000319792 MYO5BQ9ULV0 1848 aa44.36■■■■■ 4.69
NECTIN3-201ENST00000319792 LAMC1P11047 1609 aa44.36■■■■■ 4.69
NECTIN3-201ENST00000319792 RPGRIP1LQ68CZ1 1315 aa44.33■■■■■ 4.69
NECTIN3-201ENST00000319792 EIF4G2P78344 907 aaKnown RBP eCLIP44.33■■■■■ 4.69
NECTIN3-201ENST00000319792 KIAA1210Q9ULL0 1709 aa44.33■■■■■ 4.69
NECTIN3-201ENST00000319792 C3P01024 1663 aa44.32■■■■■ 4.69
NECTIN3-201ENST00000319792 NRXN1Q9ULB1 1477 aa44.32■■■■■ 4.68
NECTIN3-201ENST00000319792 GPRASP1Q5JY77 1395 aa44.3■■■■■ 4.68
NECTIN3-201ENST00000319792 CHGAP10645 457 aaKnown RBP44.29■■■■■ 4.68
NECTIN3-201ENST00000319792 NEXMIFQ5QGS0 1516 aa44.28■■■■■ 4.68
NECTIN3-201ENST00000319792 HSPA5P11021 654 aaKnown RBP44.28■■■■■ 4.68
NECTIN3-201ENST00000319792 ROCK2O75116 1388 aaKnown RBP44.25■■■■■ 4.67
NECTIN3-201ENST00000319792 ADAMTSL3P82987 1691 aa44.24■■■■■ 4.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms