RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
EDEM3-201ENST00000318130 JPH4Q96JJ6 628 aa17.46■□□□□ 0.39
EDEM3-201ENST00000318130 ARHGAP35Q9NRY4 1499 aa17.46■□□□□ 0.39
EDEM3-201ENST00000318130 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.38
EDEM3-201ENST00000318130 MCCP23508 829 aa17.46■□□□□ 0.38
EDEM3-201ENST00000318130 RRP7AQ9Y3A4 280 aaKnown RBP17.46■□□□□ 0.38
EDEM3-201ENST00000318130 MINK1Q8N4C8 1332 aaPredicted RBP17.45■□□□□ 0.38
EDEM3-201ENST00000318130 KIAA2012Q0VF49 1180 aa17.45■□□□□ 0.38
EDEM3-201ENST00000318130 PSME1Q06323 249 aa17.45■□□□□ 0.38
EDEM3-201ENST00000318130 WWC1Q8IX03 1113 aa17.44■□□□□ 0.38
EDEM3-201ENST00000318130 FHOD3Q2V2M9 1422 aa17.43■□□□□ 0.38
EDEM3-201ENST00000318130 PTMSP20962 102 aa17.42■□□□□ 0.38
EDEM3-201ENST00000318130 ELL2O00472 640 aaPredicted RBP17.42■□□□□ 0.38
EDEM3-201ENST00000318130 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
EDEM3-201ENST00000318130 CREBRFQ8IUR6 639 aa17.41■□□□□ 0.38
EDEM3-201ENST00000318130 FAM177BA6PVY3 158 aa17.41■□□□□ 0.38
EDEM3-201ENST00000318130 EIF2S2P20042 333 aaKnown RBP17.4■□□□□ 0.38
EDEM3-201ENST00000318130 TRIM6-TRIM34B2RNG4 842 aa17.39■□□□□ 0.37
EDEM3-201ENST00000318130 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
EDEM3-201ENST00000318130 DCAF8L1A6NGE4 600 aa17.38■□□□□ 0.37
EDEM3-201ENST00000318130 ATF3P18847 181 aa17.38■□□□□ 0.37
EDEM3-201ENST00000318130 C1orf141Q5JVX7 400 aa17.37■□□□□ 0.37
EDEM3-201ENST00000318130 FHAD1B1AJZ9 1412 aa17.37■□□□□ 0.37
EDEM3-201ENST00000318130 MPHOSPH9Q99550 1183 aa17.37■□□□□ 0.37
EDEM3-201ENST00000318130 KTN1Q86UP2 1357 aaKnown RBP17.37■□□□□ 0.37
EDEM3-201ENST00000318130 MFAP1P55081 439 aaKnown RBP17.37■□□□□ 0.37
EDEM3-201ENST00000318130 CFAP44Q96MT7 982 aa17.37■□□□□ 0.37
EDEM3-201ENST00000318130 RWDD1Q9H446 243 aaPredicted RBP17.36■□□□□ 0.37
EDEM3-201ENST00000318130 STRN4Q9NRL3 753 aa17.36■□□□□ 0.37
EDEM3-201ENST00000318130 SETD5Q9C0A6 1442 aa17.36■□□□□ 0.37
EDEM3-201ENST00000318130 CLUAP1Q96AJ1 413 aa17.35■□□□□ 0.37
EDEM3-201ENST00000318130 CWC22Q9HCG8 908 aaKnown RBP17.35■□□□□ 0.37
EDEM3-201ENST00000318130 HSP90AA2PQ14568 343 aaPredicted RBP17.35■□□□□ 0.37
EDEM3-201ENST00000318130 TNNT3P45378 269 aaPredicted RBP17.34■□□□□ 0.37
EDEM3-201ENST00000318130 FOXD4L1Q9NU39 408 aa17.34■□□□□ 0.37
EDEM3-201ENST00000318130 STK31Q9BXU1 1019 aa17.34■□□□□ 0.37
EDEM3-201ENST00000318130 FBXO3Q9UK99 471 aa17.33■□□□□ 0.37
EDEM3-201ENST00000318130 SYAP1Q96A49 352 aaPredicted RBP17.31■□□□□ 0.36
EDEM3-201ENST00000318130 RSPH6AQ9H0K4 717 aa17.31■□□□□ 0.36
EDEM3-201ENST00000318130 KIAA1211Q6ZU35 1233 aa17.31■□□□□ 0.36
EDEM3-201ENST00000318130 IPO8O15397 1037 aaKnown RBP17.3■□□□□ 0.36
EDEM3-201ENST00000318130 TRIM34Q9BYJ4 488 aa17.3■□□□□ 0.36
EDEM3-201ENST00000318130 FOXD4L5Q5VV16 416 aaPredicted RBP17.3■□□□□ 0.36
EDEM3-201ENST00000318130 FOXD4L4Q8WXT5 416 aaPredicted RBP17.3■□□□□ 0.36
EDEM3-201ENST00000318130 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
EDEM3-201ENST00000318130 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
EDEM3-201ENST00000318130 ANKRD30AQ9BXX3 1397 aa17.29■□□□□ 0.36
EDEM3-201ENST00000318130 FYB1O15117 783 aa17.28■□□□□ 0.36
EDEM3-201ENST00000318130 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
EDEM3-201ENST00000318130 SMC4Q9NTJ3 1288 aa17.28■□□□□ 0.36
EDEM3-201ENST00000318130 RALBP1Q15311 655 aa17.28■□□□□ 0.36
EDEM3-201ENST00000318130 PMFBP1Q8TBY8 1022 aa17.28■□□□□ 0.36
EDEM3-201ENST00000318130 RASSF8Q8NHQ8 419 aa17.27■□□□□ 0.36
EDEM3-201ENST00000318130 SLC4A3P48751 1232 aa17.27■□□□□ 0.36
EDEM3-201ENST00000318130 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
EDEM3-201ENST00000318130 SF3B2Q13435 895 aaKnown RBP17.26■□□□□ 0.35
EDEM3-201ENST00000318130 GSE1Q14687 1217 aa17.26■□□□□ 0.35
EDEM3-201ENST00000318130 CTDP1Q9Y5B0 961 aaPredicted RBP17.26■□□□□ 0.35
EDEM3-201ENST00000318130 MARCH6O60337 910 aa17.26■□□□□ 0.35
EDEM3-201ENST00000318130 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
EDEM3-201ENST00000318130 MTMR7Q9Y216 660 aa17.26■□□□□ 0.35
EDEM3-201ENST00000318130 KDM4AO75164 1064 aa17.25■□□□□ 0.35
EDEM3-201ENST00000318130 KRI1Q8N9T8 703 aaKnown RBP17.25■□□□□ 0.35
EDEM3-201ENST00000318130 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.25■□□□□ 0.35
EDEM3-201ENST00000318130 COG3Q96JB2 828 aa17.25■□□□□ 0.35
EDEM3-201ENST00000318130 PLIN1O60240 522 aa17.24■□□□□ 0.35
EDEM3-201ENST00000318130 RAB3GAP2Q9H2M9 1393 aa17.24■□□□□ 0.35
EDEM3-201ENST00000318130 ESCO1Q5FWF5 840 aa17.24■□□□□ 0.35
EDEM3-201ENST00000318130 XPCQ01831 940 aaPredicted RBP17.23■□□□□ 0.35
EDEM3-201ENST00000318130 PTPRGP23470 1445 aa17.23■□□□□ 0.35
EDEM3-201ENST00000318130 FANCD2Q9BXW9 1451 aa17.23■□□□□ 0.35
EDEM3-201ENST00000318130 AIMP1Q12904 312 aaKnown RBP17.23■□□□□ 0.35
EDEM3-201ENST00000318130 VPS37DQ86XT2 251 aa17.23■□□□□ 0.35
EDEM3-201ENST00000318130 PDE4AP27815 886 aa17.22■□□□□ 0.35
EDEM3-201ENST00000318130 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.34
EDEM3-201ENST00000318130 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
EDEM3-201ENST00000318130 HTATSF1O43719 755 aaKnown RBP17.2■□□□□ 0.34
EDEM3-201ENST00000318130 NLRP2Q9NX02 1062 aa17.2■□□□□ 0.34
EDEM3-201ENST00000318130 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
EDEM3-201ENST00000318130 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
EDEM3-201ENST00000318130 DDX11L8A8MPP1 907 aa17.18■□□□□ 0.34
EDEM3-201ENST00000318130 FOXD4L6Q3SYB3 417 aaPredicted RBP17.18■□□□□ 0.34
EDEM3-201ENST00000318130 FOXD4L3Q6VB84 417 aaPredicted RBP17.18■□□□□ 0.34
EDEM3-201ENST00000318130 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
EDEM3-201ENST00000318130 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
EDEM3-201ENST00000318130 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■■■■□ 23.6
EDEM3-201ENST00000318130 HMOX1P09601 288 aa17.17■□□□□ 0.34
EDEM3-201ENST00000318130 TEFQ10587 303 aa17.17■□□□□ 0.34
EDEM3-201ENST00000318130 GPATCH3Q96I76 525 aa17.17■□□□□ 0.34
EDEM3-201ENST00000318130 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
EDEM3-201ENST00000318130 RBM33Q96EV2 1170 aaKnown RBP17.17■□□□□ 0.34
EDEM3-201ENST00000318130 TMEM132EQ6IEE7 984 aa17.16■□□□□ 0.34
EDEM3-201ENST00000318130 TPM4P67936 248 aa17.16■□□□□ 0.34
EDEM3-201ENST00000318130 DHX16O60231 1041 aaKnown RBP17.16■□□□□ 0.34
EDEM3-201ENST00000318130 FOSBP53539 338 aa17.16■□□□□ 0.34
EDEM3-201ENST00000318130 TCEAL9Q9UHQ7 104 aa17.16■□□□□ 0.34
EDEM3-201ENST00000318130 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
EDEM3-201ENST00000318130 PROSER2Q86WR7 435 aaPredicted RBP17.15■□□□□ 0.34
EDEM3-201ENST00000318130 PDE3BQ13370 1112 aa17.15■□□□□ 0.34
EDEM3-201ENST00000318130 NOC3LQ8WTT2 800 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms