RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 AKNAQ7Z591 1439 aa5.65□□□□□ -1.51
CNOT1-201ENST00000317147 CFTRP13569 1480 aa5.65□□□□□ -1.51
CNOT1-201ENST00000317147 RRP7BPQ9NSQ0 103 aa5.64□□□□□ -1.51
CNOT1-201ENST00000317147 PPP1R15AO75807 674 aaPredicted RBP5.64□□□□□ -1.51
CNOT1-201ENST00000317147 PDCL2Q8N4E4 241 aa5.64□□□□□ -1.51
CNOT1-201ENST00000317147 IPO8O15397 1037 aaKnown RBP5.64□□□□□ -1.51
CNOT1-201ENST00000317147 FTSJ3Q8IY81 847 aaKnown RBP5.64□□□□□ -1.51
CNOT1-201ENST00000317147 TIAM1Q13009 1591 aa5.64□□□□□ -1.51
CNOT1-201ENST00000317147 BRD4O60885 1362 aaPredicted RBP5.64□□□□□ -1.51
CNOT1-201ENST00000317147 HSP90AB1P08238 724 aaKnown RBP5.64□□□□□ -1.51
CNOT1-201ENST00000317147 MCM5P33992 734 aa5.64□□□□□ -1.51
CNOT1-201ENST00000317147 CWC15Q9P013 229 aaKnown RBP5.63□□□□□ -1.51
CNOT1-201ENST00000317147 TNNT3P45378 269 aaPredicted RBP5.63□□□□□ -1.51
CNOT1-201ENST00000317147 SETQ01105 290 aaPredicted RBP5.63□□□□□ -1.51
CNOT1-201ENST00000317147 CUL7Q14999 1698 aa5.63□□□□□ -1.51
CNOT1-201ENST00000317147 MYBBP1AQ9BQG0 1328 aaKnown RBP5.63□□□□□ -1.51
CNOT1-201ENST00000317147 RP1P56715 2156 aa5.63□□□□□ -1.51
CNOT1-201ENST00000317147 TEX35Q5T0J7 233 aa5.63□□□□□ -1.51
CNOT1-201ENST00000317147 DHX29Q7Z478 1369 aaKnown RBP5.63□□□□□ -1.51
CNOT1-201ENST00000317147 PAK3O75914 559 aaPredicted RBP5.63□□□□□ -1.51
CNOT1-201ENST00000317147 MYH13Q9UKX3 1938 aa5.62□□□□□ -1.51
CNOT1-201ENST00000317147 EHBP1L1Q8N3D4 1523 aa5.62□□□□□ -1.51
CNOT1-201ENST00000317147 CFAP43Q8NDM7 1665 aa5.62□□□□□ -1.51
CNOT1-201ENST00000317147 DIAPH3Q9NSV4 1193 aa5.62□□□□□ -1.51
CNOT1-201ENST00000317147 VIRMAQ69YN4 1812 aaKnown RBP5.62□□□□□ -1.51
CNOT1-201ENST00000317147 CIZ1Q9ULV3 898 aaPredicted RBP5.62□□□□□ -1.51
CNOT1-201ENST00000317147 CCDC34Q96HJ3 373 aa5.61□□□□□ -1.51
CNOT1-201ENST00000317147 SYNJ1O43426 1573 aa5.61□□□□□ -1.51
CNOT1-201ENST00000317147 AQRO60306 1485 aaKnown RBP eCLIP5.61□□□□□ -1.518e-7■■■■□ 22.2
CNOT1-201ENST00000317147 PDCL3Q9H2J4 239 aa5.61□□□□□ -1.51
CNOT1-201ENST00000317147 MYH7P12883 1935 aa5.61□□□□□ -1.51
CNOT1-201ENST00000317147 KDM2AQ9Y2K7 1162 aa5.61□□□□□ -1.51
CNOT1-201ENST00000317147 ZMYM3Q14202 1370 aa5.61□□□□□ -1.51
CNOT1-201ENST00000317147 PDE4AP27815 886 aa5.61□□□□□ -1.51
CNOT1-201ENST00000317147 VSIG10Q8N0Z9 540 aa5.61□□□□□ -1.51
CNOT1-201ENST00000317147 TSPY4P0CV99 314 aa5.61□□□□□ -1.51
CNOT1-201ENST00000317147 TSPY10P0CW01 314 aa5.61□□□□□ -1.51
CNOT1-201ENST00000317147 CCDC173Q0VFZ6 552 aa5.61□□□□□ -1.51
CNOT1-201ENST00000317147 INSRP06213 1382 aa5.61□□□□□ -1.51
CNOT1-201ENST00000317147 TERF1P54274 439 aa5.6□□□□□ -1.51
CNOT1-201ENST00000317147 HDAC5Q9UQL6 1122 aa5.6□□□□□ -1.51
CNOT1-201ENST00000317147 SRCAPQ6ZRS2 3230 aa5.6□□□□□ -1.51
CNOT1-201ENST00000317147 ATAD2Q6PL18 1390 aa5.6□□□□□ -1.51
CNOT1-201ENST00000317147 CCDC39Q9UFE4 941 aa5.6□□□□□ -1.51
CNOT1-201ENST00000317147 LETM1O95202 739 aaPredicted RBP5.6□□□□□ -1.51
CNOT1-201ENST00000317147 HS1BP3Q53T59 392 aa5.6□□□□□ -1.51
CNOT1-201ENST00000317147 HECW1Q76N89 1606 aa5.6□□□□□ -1.51
CNOT1-201ENST00000317147 FOXD1Q16676 465 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 HFM1A2PYH4 1435 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 RGS3P49796 1198 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 KLHL34Q8N239 644 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 FAM184AQ8NB25 1140 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 CHMP5Q9NZZ3 219 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 BIVM-ERCC5R4GMW8 1640 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 MYH3P11055 1940 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 ST18O60284 1047 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 ZMYM4Q5VZL5 1548 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 RRP1P56182 461 aaKnown RBP5.59□□□□□ -1.51
CNOT1-201ENST00000317147 TPM4P67936 248 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 MBD3O95983 291 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 NUCB2P80303 420 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 TMF1P82094 1093 aa5.59□□□□□ -1.51
CNOT1-201ENST00000317147 RSPH4AQ5TD94 716 aa5.59□□□□□ -1.52
CNOT1-201ENST00000317147 CREBRFQ8IUR6 639 aa5.59□□□□□ -1.52
CNOT1-201ENST00000317147 KIF3AQ9Y496 699 aa5.59□□□□□ -1.52
CNOT1-201ENST00000317147 ROCK1Q13464 1354 aa5.59□□□□□ -1.52
CNOT1-201ENST00000317147 LRRC9Q6ZRR7 1453 aa5.59□□□□□ -1.52
CNOT1-201ENST00000317147 CC2D2AQ9P2K1 1620 aa5.58□□□□□ -1.52
CNOT1-201ENST00000317147 CCP110O43303 1012 aa5.58□□□□□ -1.52
CNOT1-201ENST00000317147 POLA1P09884 1462 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-201ENST00000317147 ARGLU1Q9NWB6 273 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-201ENST00000317147 CT47B1P0C2W7 299 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-201ENST00000317147 PRKRIP1Q9H875 184 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-201ENST00000317147 CACNA1FO60840 1977 aa5.58□□□□□ -1.52
CNOT1-201ENST00000317147 MYOM3Q5VTT5 1437 aa5.58□□□□□ -1.52
CNOT1-201ENST00000317147 HMGB1P09429 215 aaKnown RBP5.58□□□□□ -1.52
CNOT1-201ENST00000317147 ITSN2Q9NZM3 1697 aa5.57□□□□□ -1.52
CNOT1-201ENST00000317147 RNF20Q5VTR2 975 aa5.57□□□□□ -1.52
CNOT1-201ENST00000317147 CARD11Q9BXL7 1154 aa5.57□□□□□ -1.52
CNOT1-201ENST00000317147 PCNTO95613 3336 aa5.57□□□□□ -1.52
CNOT1-201ENST00000317147 CASKIN1Q8WXD9 1431 aa5.57□□□□□ -1.52
CNOT1-201ENST00000317147 FAM193AP78312 1265 aa5.57□□□□□ -1.52
CNOT1-201ENST00000317147 ACBD3Q9H3P7 528 aa5.57□□□□□ -1.52
CNOT1-201ENST00000317147 PODXL2Q9NZ53 605 aa5.57□□□□□ -1.52
CNOT1-201ENST00000317147 KIF2AO00139 706 aaPredicted RBP5.57□□□□□ -1.52
CNOT1-201ENST00000317147 USP8P40818 1118 aa5.57□□□□□ -1.52
CNOT1-201ENST00000317147 ESF1Q9H501 851 aaKnown RBP5.57□□□□□ -1.52
CNOT1-201ENST00000317147 ZNF777Q9ULD5 760 aaPredicted RBP5.56□□□□□ -1.52
CNOT1-201ENST00000317147 GOLGB1Q14789 3259 aaKnown RBP5.56□□□□□ -1.52
CNOT1-201ENST00000317147 KIF7Q2M1P5 1343 aa5.56□□□□□ -1.52
CNOT1-201ENST00000317147 FGD6Q6ZV73 1430 aa5.56□□□□□ -1.52
CNOT1-201ENST00000317147 GOLGA6L4A6NEF3 574 aa5.56□□□□□ -1.52
CNOT1-201ENST00000317147 SLKQ9H2G2 1235 aaPredicted RBP5.56□□□□□ -1.52
CNOT1-201ENST00000317147 CARMIL1Q5VZK9 1371 aa5.56□□□□□ -1.52
CNOT1-201ENST00000317147 MCM2P49736 904 aa5.56□□□□□ -1.52
CNOT1-201ENST00000317147 PRXQ9BXM0 1461 aa5.56□□□□□ -1.52
CNOT1-201ENST00000317147 E9PSI1 815 aa5.56□□□□□ -1.52
CNOT1-201ENST00000317147 HSPA5P11021 654 aaKnown RBP5.56□□□□□ -1.52
CNOT1-201ENST00000317147 GZF1Q9H116 711 aaPredicted RBP5.56□□□□□ -1.52
CNOT1-201ENST00000317147 CADPSQ9ULU8 1353 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms