RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 MYO5CQ9NQX4 1742 aa26.94■■□□□ 1.9
AP3S1-201ENST00000316788 PPRC1Q5VV67 1664 aaKnown RBP26.94■■□□□ 1.9
AP3S1-201ENST00000316788 SAMD9LQ8IVG5 1584 aa26.94■■□□□ 1.9
AP3S1-201ENST00000316788 CDC42BPBQ9Y5S2 1711 aa26.93■■□□□ 1.9
AP3S1-201ENST00000316788 USP47Q96K76 1375 aa26.93■■□□□ 1.9
AP3S1-201ENST00000316788 ARHGAP5Q13017 1502 aa26.91■■□□□ 1.9
AP3S1-201ENST00000316788 ERICH6BQ5W0A0 696 aa26.9■■□□□ 1.9
AP3S1-201ENST00000316788 ROCK2O75116 1388 aaKnown RBP26.89■■□□□ 1.89
AP3S1-201ENST00000316788 FANCAO15360 1455 aa26.87■■□□□ 1.89
AP3S1-201ENST00000316788 BCANQ96GW7 911 aa26.87■■□□□ 1.89
AP3S1-201ENST00000316788 DHX29Q7Z478 1369 aaKnown RBP26.86■■□□□ 1.89
AP3S1-201ENST00000316788 PLEKHH2Q8IVE3 1493 aa26.85■■□□□ 1.89
AP3S1-201ENST00000316788 BCORL1Q5H9F3 1711 aa26.85■■□□□ 1.89
AP3S1-201ENST00000316788 ZBED9Q6R2W3 1325 aa26.84■■□□□ 1.89
AP3S1-201ENST00000316788 EFCAB2Q5VUJ9 269 aa26.84■■□□□ 1.89
AP3S1-201ENST00000316788 UNC13BO14795 1591 aa26.83■■□□□ 1.89
AP3S1-201ENST00000316788 ARAP3Q8WWN8 1544 aa26.83■■□□□ 1.88
AP3S1-201ENST00000316788 MRS2Q9HD23 443 aa26.82■■□□□ 1.88
AP3S1-201ENST00000316788 FAM135AQ9P2D6 1515 aa26.82■■□□□ 1.88
AP3S1-201ENST00000316788 CCDC184Q52MB2 194 aa26.82■■□□□ 1.88
AP3S1-201ENST00000316788 HNRNPMP52272 730 aaKnown RBP eCLIP26.81■■□□□ 1.88
AP3S1-201ENST00000316788 PLXNC1O60486 1568 aa26.81■■□□□ 1.88
AP3S1-201ENST00000316788 SYCP2Q9BX26 1530 aa26.76■■□□□ 1.87
AP3S1-201ENST00000316788 NEO1Q92859 1461 aa26.76■■□□□ 1.87
AP3S1-201ENST00000316788 ADGRL1O94910 1474 aa26.74■■□□□ 1.87
AP3S1-201ENST00000316788 COL17A1Q9UMD9 1497 aaPredicted RBP26.73■■□□□ 1.87
AP3S1-201ENST00000316788 KTN1Q86UP2 1357 aaKnown RBP26.72■■□□□ 1.87
AP3S1-201ENST00000316788 ABCC1P33527 1531 aa26.72■■□□□ 1.87
AP3S1-201ENST00000316788 SCAPERQ9BY12 1400 aa26.72■■□□□ 1.87
AP3S1-201ENST00000316788 IQGAP3Q86VI3 1631 aa26.71■■□□□ 1.87
AP3S1-201ENST00000316788 CFAP74Q9C0B2 1584 aa26.71■■□□□ 1.87
AP3S1-201ENST00000316788 CARD11Q9BXL7 1154 aa26.7■■□□□ 1.87
AP3S1-201ENST00000316788 MAGI2Q86UL8 1455 aa26.69■■□□□ 1.86
AP3S1-201ENST00000316788 RAPGEF3O95398 923 aa26.69■■□□□ 1.86
AP3S1-201ENST00000316788 TRAPPC8Q9Y2L5 1435 aa26.68■■□□□ 1.86
AP3S1-201ENST00000316788 LAMC1P11047 1609 aa26.68■■□□□ 1.86
AP3S1-201ENST00000316788 ZNF326Q5BKZ1 582 aaKnown RBP26.68■■□□□ 1.86
AP3S1-201ENST00000316788 FAM9BQ8IZU0 186 aa26.68■■□□□ 1.86
AP3S1-201ENST00000316788 ATP10AO60312 1499 aa26.68■■□□□ 1.86
AP3S1-201ENST00000316788 DUOX2Q9NRD8 1548 aa26.68■■□□□ 1.86
AP3S1-201ENST00000316788 CCDC144AA2RUR9 1427 aa26.67■■□□□ 1.86
AP3S1-201ENST00000316788 AFAP1Q8N556 730 aa26.67■■□□□ 1.86
AP3S1-201ENST00000316788 PRAG1Q86YV5 1406 aa26.66■■□□□ 1.86
AP3S1-201ENST00000316788 ERBINQ96RT1 1412 aa26.66■■□□□ 1.86
AP3S1-201ENST00000316788 GPRASP1Q5JY77 1395 aa26.65■■□□□ 1.86
AP3S1-201ENST00000316788 TRPM1Q7Z4N2 1603 aa26.65■■□□□ 1.86
AP3S1-201ENST00000316788 E9PCH4 1651 aa26.65■■□□□ 1.86
AP3S1-201ENST00000316788 PLA2R1Q13018 1463 aa26.62■■□□□ 1.85
AP3S1-201ENST00000316788 SMG6Q86US8 1419 aaKnown RBP26.62■■□□□ 1.85
AP3S1-201ENST00000316788 DCAF11Q8TEB1 546 aa26.61■■□□□ 1.85
AP3S1-201ENST00000316788 POGZQ7Z3K3 1410 aa26.61■■□□□ 1.85
AP3S1-201ENST00000316788 FRMPD1Q5SYB0 1578 aa26.6■■□□□ 1.85
AP3S1-201ENST00000316788 PPP4R2Q9NY27 417 aa26.59■■□□□ 1.85
AP3S1-201ENST00000316788 EIF2AK4Q9P2K8 1649 aaKnown RBP26.59■■□□□ 1.85
AP3S1-201ENST00000316788 RICTORQ6R327 1708 aa26.57■■□□□ 1.84
AP3S1-201ENST00000316788 A2MP01023 1474 aa26.56■■□□□ 1.84
AP3S1-201ENST00000316788 BRD4O60885 1362 aaPredicted RBP26.56■■□□□ 1.84
AP3S1-201ENST00000316788 ST20-MTHFSA0A0A6YYL1 179 aa26.56■■□□□ 1.84
AP3S1-201ENST00000316788 RALBP1Q15311 655 aa26.55■■□□□ 1.84
AP3S1-201ENST00000316788 ZNF518AQ6AHZ1 1483 aa26.54■■□□□ 1.84
AP3S1-201ENST00000316788 PRDM15P57071 1507 aaPredicted RBP26.54■■□□□ 1.84
AP3S1-201ENST00000316788 RBM19Q9Y4C8 960 aaKnown RBP26.53■■□□□ 1.84
AP3S1-201ENST00000316788 KDM2AQ9Y2K7 1162 aa26.53■■□□□ 1.84
AP3S1-201ENST00000316788 PNISRQ8TF01 805 aaKnown RBP26.52■■□□□ 1.84
AP3S1-201ENST00000316788 LRPPRCP42704 1394 aaKnown RBP26.52■■□□□ 1.84
AP3S1-201ENST00000316788 MYBBP1AQ9BQG0 1328 aaKnown RBP26.5■■□□□ 1.83
AP3S1-201ENST00000316788 RTEL1-TNFRSF6BF6WH68 1400 aa26.5■■□□□ 1.83
AP3S1-201ENST00000316788 SPAG9O60271 1321 aaKnown RBP26.49■■□□□ 1.83
AP3S1-201ENST00000316788 POLR3GLQ9BT43 218 aa26.48■■□□□ 1.83
AP3S1-201ENST00000316788 RNF123Q5XPI4 1314 aa26.48■■□□□ 1.83
AP3S1-201ENST00000316788 MYT1LQ9UL68 1186 aa26.48■■□□□ 1.83
AP3S1-201ENST00000316788 NUDCQ9Y266 331 aa26.48■■□□□ 1.83
AP3S1-201ENST00000316788 YEATS2Q9ULM3 1422 aa26.46■■□□□ 1.83
AP3S1-201ENST00000316788 WASHC2CQ9Y4E1 1318 aa26.45■■□□□ 1.82
AP3S1-201ENST00000316788 TMC1Q8TDI8 760 aa26.45■■□□□ 1.82
AP3S1-201ENST00000316788 ZFYVE16Q7Z3T8 1539 aa26.44■■□□□ 1.82
AP3S1-201ENST00000316788 RNF17Q9BXT8 1623 aaKnown RBP26.44■■□□□ 1.82
AP3S1-201ENST00000316788 IRX6P78412 446 aaPredicted RBP26.44■■□□□ 1.82
AP3S1-201ENST00000316788 ZMYM4Q5VZL5 1548 aa26.44■■□□□ 1.82
AP3S1-201ENST00000316788 KIDINS220Q9ULH0 1771 aa26.43■■□□□ 1.82
AP3S1-201ENST00000316788 PARD3Q8TEW0 1356 aa26.43■■□□□ 1.82
AP3S1-201ENST00000316788 HECW2Q9P2P5 1572 aa26.42■■□□□ 1.82
AP3S1-201ENST00000316788 INO80Q9ULG1 1556 aaPredicted RBP26.42■■□□□ 1.82
AP3S1-201ENST00000316788 INSRP06213 1382 aa26.42■■□□□ 1.82
AP3S1-201ENST00000316788 MLH3Q9UHC1 1453 aa26.42■■□□□ 1.82
AP3S1-201ENST00000316788 ATP7AQ04656 1500 aa26.42■■□□□ 1.82
AP3S1-201ENST00000316788 ANP32EQ9BTT0 268 aa26.42■■□□□ 1.82
AP3S1-201ENST00000316788 STAC3Q96MF2 364 aa26.39■■□□□ 1.82
AP3S1-201ENST00000316788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.39■■□□□ 1.81
AP3S1-201ENST00000316788 DEPDC5O75140 1603 aa26.37■■□□□ 1.81
AP3S1-201ENST00000316788 ABCA6Q8N139 1617 aa26.37■■□□□ 1.81
AP3S1-201ENST00000316788 TRPM2O94759 1503 aa26.37■■□□□ 1.81
AP3S1-201ENST00000316788 NLRP13Q86W25 1043 aa26.36■■□□□ 1.81
AP3S1-201ENST00000316788 FANCIQ9NVI1 1328 aa26.35■■□□□ 1.81
AP3S1-201ENST00000316788 TESK2Q96S53 571 aa26.35■■□□□ 1.81
AP3S1-201ENST00000316788 NBPF1Q3BBV0 1214 aa26.34■■□□□ 1.81
AP3S1-201ENST00000316788 PTPRTO14522 1441 aa26.34■■□□□ 1.81
AP3S1-201ENST00000316788 DIP2CQ9Y2E4 1556 aa26.34■■□□□ 1.81
AP3S1-201ENST00000316788 PER1O15534 1290 aaPredicted RBP26.34■■□□□ 1.81
AP3S1-201ENST00000316788 NEURL4Q96JN8 1562 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms