RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 POLR1AO95602 1720 aaPredicted RBP20.38■□□□□ 0.85
CLK4-201ENST00000316308 TRAPPC8Q9Y2L5 1435 aa20.38■□□□□ 0.85
CLK4-201ENST00000316308 RSPH4AQ5TD94 716 aa20.38■□□□□ 0.85
CLK4-201ENST00000316308 AFAP1Q8N556 730 aa20.38■□□□□ 0.85
CLK4-201ENST00000316308 TSHZ2Q9NRE2 1034 aa20.38■□□□□ 0.85
CLK4-201ENST00000316308 RALGAPBQ86X10 1494 aa20.37■□□□□ 0.85
CLK4-201ENST00000316308 PLCH2O75038 1416 aa20.35■□□□□ 0.85
CLK4-201ENST00000316308 CCDC144AA2RUR9 1427 aa20.33■□□□□ 0.85
CLK4-201ENST00000316308 NEFLP07196 543 aa20.32■□□□□ 0.84
CLK4-201ENST00000316308 ROCK2O75116 1388 aaKnown RBP20.32■□□□□ 0.84
CLK4-201ENST00000316308 EFCAB2Q5VUJ9 269 aa20.32■□□□□ 0.84
CLK4-201ENST00000316308 MAST1Q9Y2H9 1570 aa20.31■□□□□ 0.84
CLK4-201ENST00000316308 UNC13BO14795 1591 aa20.29■□□□□ 0.84
CLK4-201ENST00000316308 A2MP01023 1474 aa20.28■□□□□ 0.84
CLK4-201ENST00000316308 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
CLK4-201ENST00000316308 PLXNC1O60486 1568 aa20.27■□□□□ 0.83
CLK4-201ENST00000316308 UHRF1BP1LA0JNW5 1464 aa20.26■□□□□ 0.83
CLK4-201ENST00000316308 ABCC1P33527 1531 aa20.26■□□□□ 0.83
CLK4-201ENST00000316308 DUOX2Q9NRD8 1548 aa20.24■□□□□ 0.83
CLK4-201ENST00000316308 IQGAP3Q86VI3 1631 aa20.23■□□□□ 0.83
CLK4-201ENST00000316308 SPAG9O60271 1321 aaKnown RBP20.23■□□□□ 0.83
CLK4-201ENST00000316308 TRPM1Q7Z4N2 1603 aa20.22■□□□□ 0.83
CLK4-201ENST00000316308 ZBED9Q6R2W3 1325 aa20.19■□□□□ 0.82
CLK4-201ENST00000316308 ERBINQ96RT1 1412 aa20.19■□□□□ 0.82
CLK4-201ENST00000316308 MAGI2Q86UL8 1455 aa20.18■□□□□ 0.82
CLK4-201ENST00000316308 MYT1LQ9UL68 1186 aa20.17■□□□□ 0.82
CLK4-201ENST00000316308 DISP3Q9P2K9 1392 aa20.17■□□□□ 0.82
CLK4-201ENST00000316308 ARID4BQ4LE39 1312 aaPredicted RBP20.17■□□□□ 0.82
CLK4-201ENST00000316308 TESK2Q96S53 571 aa20.16■□□□□ 0.82
CLK4-201ENST00000316308 WDR7Q9Y4E6 1490 aa20.16■□□□□ 0.82
CLK4-201ENST00000316308 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
CLK4-201ENST00000316308 ZFYVE16Q7Z3T8 1539 aa20.15■□□□□ 0.82
CLK4-201ENST00000316308 FANCAO15360 1455 aa20.14■□□□□ 0.81
CLK4-201ENST00000316308 SCAPERQ9BY12 1400 aa20.14■□□□□ 0.81
CLK4-201ENST00000316308 E9PCH4 1651 aa20.13■□□□□ 0.81
CLK4-201ENST00000316308 TMC1Q8TDI8 760 aa20.13■□□□□ 0.81
CLK4-201ENST00000316308 KIF3BO15066 747 aa20.12■□□□□ 0.81
CLK4-201ENST00000316308 GPRASP1Q5JY77 1395 aa20.11■□□□□ 0.81
CLK4-201ENST00000316308 ASXL2Q76L83 1435 aa20.1■□□□□ 0.81
CLK4-201ENST00000316308 ATP10AO60312 1499 aa20.1■□□□□ 0.81
CLK4-201ENST00000316308 PER1O15534 1290 aaPredicted RBP20.1■□□□□ 0.81
CLK4-201ENST00000316308 CC2D1BQ5T0F9 858 aaKnown RBP20.09■□□□□ 0.81
CLK4-201ENST00000316308 SALL2Q9Y467 1007 aaPredicted RBP20.08■□□□□ 0.8
CLK4-201ENST00000316308 PRDM15P57071 1507 aaPredicted RBP20.07■□□□□ 0.8
CLK4-201ENST00000316308 ADGRL1O94910 1474 aa20.07■□□□□ 0.8
CLK4-201ENST00000316308 ABCA9Q8IUA7 1624 aa20.06■□□□□ 0.8
CLK4-201ENST00000316308 UGGT1Q9NYU2 1555 aa20.06■□□□□ 0.8
CLK4-201ENST00000316308 ATP7AQ04656 1500 aa20.06■□□□□ 0.8
CLK4-201ENST00000316308 PANK3Q9H999 370 aa20.05■□□□□ 0.8
CLK4-201ENST00000316308 RTEL1-TNFRSF6BF6WH68 1400 aa20.05■□□□□ 0.8
CLK4-201ENST00000316308 B4GALNT3Q6L9W6 998 aa20.04■□□□□ 0.8
CLK4-201ENST00000316308 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
CLK4-201ENST00000316308 COL17A1Q9UMD9 1497 aaPredicted RBP20.04■□□□□ 0.8
CLK4-201ENST00000316308 CLTCL1P53675 1640 aa20.03■□□□□ 0.8
CLK4-201ENST00000316308 INO80Q9ULG1 1556 aaPredicted RBP20.02■□□□□ 0.8
CLK4-201ENST00000316308 ARAP3Q8WWN8 1544 aa20.02■□□□□ 0.79
CLK4-201ENST00000316308 RBM19Q9Y4C8 960 aaKnown RBP20.01■□□□□ 0.79
CLK4-201ENST00000316308 RALBP1Q15311 655 aa19.99■□□□□ 0.79
CLK4-201ENST00000316308 LRPPRCP42704 1394 aaKnown RBP19.99■□□□□ 0.79
CLK4-201ENST00000316308 PARD3Q8TEW0 1356 aa19.99■□□□□ 0.79
CLK4-201ENST00000316308 PTPRTO14522 1441 aa19.99■□□□□ 0.79
CLK4-201ENST00000316308 MADDQ8WXG6 1647 aa19.99■□□□□ 0.79
CLK4-201ENST00000316308 TRPM2O94759 1503 aa19.99■□□□□ 0.79
CLK4-201ENST00000316308 DEPDC5O75140 1603 aa19.98■□□□□ 0.79
CLK4-201ENST00000316308 OSCARQ8IYS5 282 aa19.98■□□□□ 0.79
CLK4-201ENST00000316308 SPHKAPQ2M3C7 1700 aa19.98■□□□□ 0.79
CLK4-201ENST00000316308 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
CLK4-201ENST00000316308 MROH1Q8NDA8 1641 aa19.97■□□□□ 0.79
CLK4-201ENST00000316308 BRD4O60885 1362 aaPredicted RBP19.97■□□□□ 0.79
CLK4-201ENST00000316308 TMF1P82094 1093 aa19.97■□□□□ 0.79
CLK4-201ENST00000316308 KTN1Q86UP2 1357 aaKnown RBP19.97■□□□□ 0.79
CLK4-201ENST00000316308 SMG6Q86US8 1419 aaKnown RBP19.97■□□□□ 0.79
CLK4-201ENST00000316308 RNF17Q9BXT8 1623 aaKnown RBP19.96■□□□□ 0.79
CLK4-201ENST00000316308 EIF2AK4Q9P2K8 1649 aaKnown RBP19.95■□□□□ 0.78
CLK4-201ENST00000316308 LAMC1P11047 1609 aa19.95■□□□□ 0.78
CLK4-201ENST00000316308 CFAP70Q5T0N1 1121 aa19.95■□□□□ 0.78
CLK4-201ENST00000316308 KIDINS220Q9ULH0 1771 aa19.95■□□□□ 0.78
CLK4-201ENST00000316308 ADGRF5Q8IZF2 1346 aa19.94■□□□□ 0.78
CLK4-201ENST00000316308 PPP4R2Q9NY27 417 aa19.94■□□□□ 0.78
CLK4-201ENST00000316308 CFAP65Q6ZU64 1925 aaKnown RBP19.94■□□□□ 0.78
CLK4-201ENST00000316308 NLRP13Q86W25 1043 aa19.94■□□□□ 0.78
CLK4-201ENST00000316308 VWDEQ8N2E2 1590 aa19.94■□□□□ 0.78
CLK4-201ENST00000316308 TET3O43151 1660 aa19.93■□□□□ 0.78
CLK4-201ENST00000316308 CEP152O94986 1710 aa19.93■□□□□ 0.78
CLK4-201ENST00000316308 KANK1Q14678 1352 aa19.92■□□□□ 0.78
CLK4-201ENST00000316308 GGT6Q6P531 493 aa19.91■□□□□ 0.78
CLK4-201ENST00000316308 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
CLK4-201ENST00000316308 RAPGEF3O95398 923 aa19.9■□□□□ 0.78
CLK4-201ENST00000316308 CDCA7LQ96GN5 454 aa19.9■□□□□ 0.78
CLK4-201ENST00000316308 IQGAP1P46940 1657 aa19.89■□□□□ 0.77
CLK4-201ENST00000316308 CHGAP10645 457 aaKnown RBP19.89■□□□□ 0.77
CLK4-201ENST00000316308 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
CLK4-201ENST00000316308 CD109Q6YHK3 1445 aa19.88■□□□□ 0.77
CLK4-201ENST00000316308 PPRC1Q5VV67 1664 aaKnown RBP19.87■□□□□ 0.77
CLK4-201ENST00000316308 SCAF11Q99590 1463 aaKnown RBP19.85■□□□□ 0.77
CLK4-201ENST00000316308 MROH2AA6NES4 1674 aa19.85■□□□□ 0.77
CLK4-201ENST00000316308 NUTM2DQ5VT03 806 aaPredicted RBP19.85■□□□□ 0.77
CLK4-201ENST00000316308 RNF123Q5XPI4 1314 aa19.84■□□□□ 0.77
CLK4-201ENST00000316308 ZNF518AQ6AHZ1 1483 aa19.84■□□□□ 0.77
CLK4-201ENST00000316308 FRMPD1Q5SYB0 1578 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms