RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 DAPK1P53355 1430 aa8.45□□□□□ -1.06
SPATA9-202ENST00000316087 C19orf67A6NJJ6 358 aa8.44□□□□□ -1.06
SPATA9-202ENST00000316087 MKRN4PQ13434 485 aaPredicted RBP8.44□□□□□ -1.06
SPATA9-202ENST00000316087 SSUH2Q9Y2M2 353 aa8.44□□□□□ -1.06
SPATA9-202ENST00000316087 ANKRD30BQ9BXX2 1392 aa8.44□□□□□ -1.06
SPATA9-202ENST00000316087 MAGI3Q5TCQ9 1506 aa8.43□□□□□ -1.06
SPATA9-202ENST00000316087 TDRD9Q8NDG6 1382 aaKnown RBP8.43□□□□□ -1.06
SPATA9-202ENST00000316087 TEX14Q8IWB6 1497 aa8.43□□□□□ -1.06
SPATA9-202ENST00000316087 KIF14Q15058 1648 aa8.42□□□□□ -1.06
SPATA9-202ENST00000316087 CHGAP10645 457 aaKnown RBP8.42□□□□□ -1.06
SPATA9-202ENST00000316087 HIRIP3Q9BW71 556 aaPredicted RBP8.42□□□□□ -1.06
SPATA9-202ENST00000316087 SPATA31E1Q6ZUB1 1445 aa8.42□□□□□ -1.06
SPATA9-202ENST00000316087 SMG6Q86US8 1419 aaKnown RBP8.42□□□□□ -1.06
SPATA9-202ENST00000316087 KIAA0586Q9BVV6 1533 aa8.41□□□□□ -1.06
SPATA9-202ENST00000316087 DENND4BO75064 1496 aaPredicted RBP8.41□□□□□ -1.06
SPATA9-202ENST00000316087 ADGRL2O95490 1459 aa8.41□□□□□ -1.06
SPATA9-202ENST00000316087 L3MBTL2Q969R5 705 aa8.41□□□□□ -1.06
SPATA9-202ENST00000316087 MRS2Q9HD23 443 aa8.41□□□□□ -1.06
SPATA9-202ENST00000316087 ADCY10Q96PN6 1610 aa8.41□□□□□ -1.06
SPATA9-202ENST00000316087 ARHGEF12Q9NZN5 1544 aa8.41□□□□□ -1.06
SPATA9-202ENST00000316087 RAPGEF6Q8TEU7 1601 aa8.4□□□□□ -1.06
SPATA9-202ENST00000316087 BRPF1P55201 1214 aaPredicted RBP8.4□□□□□ -1.06
SPATA9-202ENST00000316087 SPOCK2Q92563 424 aa8.4□□□□□ -1.06
SPATA9-202ENST00000316087 RRP7BPQ9NSQ0 103 aa8.4□□□□□ -1.06
SPATA9-202ENST00000316087 KIAA0556O60303 1618 aa8.4□□□□□ -1.07
SPATA9-202ENST00000316087 IFT140Q96RY7 1462 aa8.39□□□□□ -1.07
SPATA9-202ENST00000316087 GABBR2O75899 941 aa8.39□□□□□ -1.07
SPATA9-202ENST00000316087 CROCC2H7BZ55 1655 aa8.39□□□□□ -1.07
SPATA9-202ENST00000316087 MRC2Q9UBG0 1479 aa8.38□□□□□ -1.07
SPATA9-202ENST00000316087 SHANK2Q9UPX8 1470 aa8.38□□□□□ -1.07
SPATA9-202ENST00000316087 ABCC5O15440 1437 aa8.38□□□□□ -1.07
SPATA9-202ENST00000316087 UHRF1BP1Q6BDS2 1440 aa8.38□□□□□ -1.07
SPATA9-202ENST00000316087 MBD5Q9P267 1494 aa8.38□□□□□ -1.07
SPATA9-202ENST00000316087 KIAA1107Q9UPP5 1409 aa8.37□□□□□ -1.07
SPATA9-202ENST00000316087 KDM6BO15054 1643 aa8.37□□□□□ -1.07
SPATA9-202ENST00000316087 CHADLQ6NUI6 762 aa8.37□□□□□ -1.07
SPATA9-202ENST00000316087 BCL11AQ9H165 835 aa8.37□□□□□ -1.07
SPATA9-202ENST00000316087 ANKRD30AQ9BXX3 1397 aa8.37□□□□□ -1.07
SPATA9-202ENST00000316087 KIF7Q2M1P5 1343 aa8.37□□□□□ -1.07
SPATA9-202ENST00000316087 TROQ12816 1431 aaPredicted RBP8.37□□□□□ -1.07
SPATA9-202ENST00000316087 CDK13Q14004 1512 aaKnown RBP8.37□□□□□ -1.07
SPATA9-202ENST00000316087 ZMYM4Q5VZL5 1548 aa8.37□□□□□ -1.07
SPATA9-202ENST00000316087 NUDCQ9Y266 331 aa8.36□□□□□ -1.07
SPATA9-202ENST00000316087 INSRP06213 1382 aa8.36□□□□□ -1.07
SPATA9-202ENST00000316087 RNF123Q5XPI4 1314 aa8.36□□□□□ -1.07
SPATA9-202ENST00000316087 PRR29P0C7W0 189 aa8.35□□□□□ -1.07
SPATA9-202ENST00000316087 ANP32AP39687 249 aaKnown RBP8.35□□□□□ -1.07
SPATA9-202ENST00000316087 CHIC2Q9UKJ5 165 aa8.35□□□□□ -1.07
SPATA9-202ENST00000316087 KDM5DQ9BY66 1539 aa8.35□□□□□ -1.07
SPATA9-202ENST00000316087 KDM5CP41229 1560 aa8.35□□□□□ -1.07
SPATA9-202ENST00000316087 CAMSAP2Q08AD1 1489 aa8.35□□□□□ -1.07
SPATA9-202ENST00000316087 RALGAPBQ86X10 1494 aa8.35□□□□□ -1.07
SPATA9-202ENST00000316087 FAM9BQ8IZU0 186 aa8.35□□□□□ -1.07
SPATA9-202ENST00000316087 NUP153P49790 1475 aaKnown RBP8.34□□□□□ -1.07
SPATA9-202ENST00000316087 USP47Q96K76 1375 aa8.34□□□□□ -1.07
SPATA9-202ENST00000316087 KIF15Q9NS87 1388 aa8.34□□□□□ -1.07
SPATA9-202ENST00000316087 PDE3BQ13370 1112 aa8.34□□□□□ -1.07
SPATA9-202ENST00000316087 RALBP1Q15311 655 aa8.34□□□□□ -1.07
SPATA9-202ENST00000316087 CARMIL2Q6F5E8 1435 aa8.34□□□□□ -1.07
SPATA9-202ENST00000316087 PZPP20742 1482 aa8.33□□□□□ -1.08
SPATA9-202ENST00000316087 BRD4O60885 1362 aaPredicted RBP8.33□□□□□ -1.08
SPATA9-202ENST00000316087 DISP1Q96F81 1524 aa8.33□□□□□ -1.08
SPATA9-202ENST00000316087 LHX8Q68G74 356 aa8.33□□□□□ -1.08
SPATA9-202ENST00000316087 WASHC2CQ9Y4E1 1318 aa8.33□□□□□ -1.08
SPATA9-202ENST00000316087 MAGI1Q96QZ7 1491 aaPredicted RBP8.33□□□□□ -1.08
SPATA9-202ENST00000316087 CFDP1Q9UEE9 299 aaPredicted RBP8.32□□□□□ -1.08
SPATA9-202ENST00000316087 RSPH4AQ5TD94 716 aa8.31□□□□□ -1.08
SPATA9-202ENST00000316087 CCDC136Q96JN2 1154 aa8.31□□□□□ -1.08
SPATA9-202ENST00000316087 NOP58Q9Y2X3 529 aaKnown RBP8.31□□□□□ -1.08
SPATA9-202ENST00000316087 GRIN2AQ12879 1464 aa8.31□□□□□ -1.08
SPATA9-202ENST00000316087 DHX29Q7Z478 1369 aaKnown RBP8.31□□□□□ -1.08
SPATA9-202ENST00000316087 ANKRD50Q9ULJ7 1429 aa8.31□□□□□ -1.08
SPATA9-202ENST00000316087 TMC1Q8TDI8 760 aa8.31□□□□□ -1.08
SPATA9-202ENST00000316087 ARHGEF5Q12774 1597 aa8.3□□□□□ -1.08
SPATA9-202ENST00000316087 LAMC1P11047 1609 aa8.3□□□□□ -1.08
SPATA9-202ENST00000316087 PLEKHH2Q8IVE3 1493 aa8.3□□□□□ -1.08
SPATA9-202ENST00000316087 GPATCH8Q9UKJ3 1502 aaKnown RBP8.3□□□□□ -1.08
SPATA9-202ENST00000316087 NBPF8Q3BBV2 869 aa8.3□□□□□ -1.08
SPATA9-202ENST00000316087 MYBBP1AQ9BQG0 1328 aaKnown RBP8.3□□□□□ -1.08
SPATA9-202ENST00000316087 LRPPRCP42704 1394 aaKnown RBP8.29□□□□□ -1.08
SPATA9-202ENST00000316087 E9PCH4 1651 aa8.28□□□□□ -1.08
SPATA9-202ENST00000316087 C11orf95C9JLR9 678 aaPredicted RBP8.28□□□□□ -1.08
SPATA9-202ENST00000316087 TCERG1O14776 1098 aaKnown RBP8.28□□□□□ -1.08
SPATA9-202ENST00000316087 MS4A1P11836 297 aa8.28□□□□□ -1.08
SPATA9-202ENST00000316087 NEUROD2Q15784 382 aa8.28□□□□□ -1.08
SPATA9-202ENST00000316087 RTL5Q5HYW3 569 aaPredicted RBP8.28□□□□□ -1.08
SPATA9-202ENST00000316087 IPO9Q96P70 1041 aaKnown RBP8.28□□□□□ -1.08
SPATA9-202ENST00000316087 ARID3AQ99856 593 aa8.28□□□□□ -1.08
SPATA9-202ENST00000316087 USP35Q9P2H5 1018 aa8.28□□□□□ -1.08
SPATA9-202ENST00000316087 CEP170Q5SW79 1584 aa8.28□□□□□ -1.08
SPATA9-202ENST00000316087 EIF2AK4Q9P2K8 1649 aaKnown RBP8.28□□□□□ -1.08
SPATA9-202ENST00000316087 IRX6P78412 446 aaPredicted RBP8.27□□□□□ -1.09
SPATA9-202ENST00000316087 PNISRQ8TF01 805 aaKnown RBP8.27□□□□□ -1.09
SPATA9-202ENST00000316087 SYNJ2O15056 1496 aa8.27□□□□□ -1.09
SPATA9-202ENST00000316087 TSPY4P0CV99 314 aa8.27□□□□□ -1.09
SPATA9-202ENST00000316087 TSPY10P0CW01 314 aa8.27□□□□□ -1.09
SPATA9-202ENST00000316087 B4GALNT3Q6L9W6 998 aa8.27□□□□□ -1.09
SPATA9-202ENST00000316087 ZMYND15Q9H091 742 aa8.27□□□□□ -1.09
SPATA9-202ENST00000316087 ZBTB47Q9UFB7 747 aaPredicted RBP8.27□□□□□ -1.09
SPATA9-202ENST00000316087 PTPRGP23470 1445 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms