RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 PLA2R1Q13018 1463 aa27.69■■■□□ 2.02
EXOSC4-201ENST00000316052 PKD2Q13563 968 aa27.68■■■□□ 2.02
EXOSC4-201ENST00000316052 TCOF1Q13428 1488 aaKnown RBP27.66■■■□□ 2.02
EXOSC4-201ENST00000316052 WASHC2CQ9Y4E1 1318 aa27.66■■■□□ 2.02
EXOSC4-201ENST00000316052 ZNF335Q9H4Z2 1342 aaPredicted RBP27.65■■■□□ 2.02
EXOSC4-201ENST00000316052 A2ML1A8K2U0 1454 aa27.64■■■□□ 2.02
EXOSC4-201ENST00000316052 MAP3K1Q13233 1512 aa27.64■■■□□ 2.02
EXOSC4-201ENST00000316052 KDM5DQ9BY66 1539 aa27.63■■■□□ 2.01
EXOSC4-201ENST00000316052 DNMT1P26358 1616 aaKnown RBP27.63■■■□□ 2.01
EXOSC4-201ENST00000316052 TNRQ92752 1358 aa27.62■■■□□ 2.01
EXOSC4-201ENST00000316052 PZPP20742 1482 aa27.62■■■□□ 2.01
EXOSC4-201ENST00000316052 FAM135AQ9P2D6 1515 aa27.6■■■□□ 2.01
EXOSC4-201ENST00000316052 IQSEC2Q5JU85 1478 aa27.59■■■□□ 2.01
EXOSC4-201ENST00000316052 MYOM3Q5VTT5 1437 aa27.58■■■□□ 2
EXOSC4-201ENST00000316052 MAST1Q9Y2H9 1570 aa27.57■■■□□ 2
EXOSC4-201ENST00000316052 MIA2Q96PC5 1412 aa27.57■■■□□ 2
EXOSC4-201ENST00000316052 RNF17Q9BXT8 1623 aaKnown RBP27.52■■■□□ 2
EXOSC4-201ENST00000316052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.48■■□□□ 1.99
EXOSC4-201ENST00000316052 ABCC3O15438 1527 aa27.48■■□□□ 1.99
EXOSC4-201ENST00000316052 NEURL4Q96JN8 1562 aa27.48■■□□□ 1.99
EXOSC4-201ENST00000316052 THEMISQ8N1K5 641 aaPredicted RBP27.47■■□□□ 1.99
EXOSC4-201ENST00000316052 POLR1AO95602 1720 aaPredicted RBP27.47■■□□□ 1.99
EXOSC4-201ENST00000316052 NLRP1Q9C000 1473 aa27.46■■□□□ 1.99
EXOSC4-201ENST00000316052 UBAP1LF5GYI3 381 aa27.46■■□□□ 1.99
EXOSC4-201ENST00000316052 EIF2AK4Q9P2K8 1649 aaKnown RBP27.45■■□□□ 1.99
EXOSC4-201ENST00000316052 ANKLE2Q86XL3 938 aa27.45■■□□□ 1.98
EXOSC4-201ENST00000316052 MROH1Q8NDA8 1641 aa27.45■■□□□ 1.98
EXOSC4-201ENST00000316052 CFAP65Q6ZU64 1925 aaKnown RBP27.44■■□□□ 1.98
EXOSC4-201ENST00000316052 DISP3Q9P2K9 1392 aa27.44■■□□□ 1.98
EXOSC4-201ENST00000316052 UGGT1Q9NYU2 1555 aa27.43■■□□□ 1.98
EXOSC4-201ENST00000316052 ABCC5O15440 1437 aa27.43■■□□□ 1.98
EXOSC4-201ENST00000316052 APLP2Q06481 763 aa27.43■■□□□ 1.98
EXOSC4-201ENST00000316052 DUOX2Q9NRD8 1548 aa27.41■■□□□ 1.98
EXOSC4-201ENST00000316052 ZC3H13Q5T200 1668 aaKnown RBP27.41■■□□□ 1.98
EXOSC4-201ENST00000316052 RRP7BPQ9NSQ0 103 aa27.4■■□□□ 1.98
EXOSC4-201ENST00000316052 PTPN23Q9H3S7 1636 aa27.4■■□□□ 1.98
EXOSC4-201ENST00000316052 SPATA31D1Q6ZQQ2 1576 aa27.39■■□□□ 1.98
EXOSC4-201ENST00000316052 CEP152O94986 1710 aa27.38■■□□□ 1.97
EXOSC4-201ENST00000316052 ERVK-7P63135 1459 aa27.38■■□□□ 1.97
EXOSC4-201ENST00000316052 KIF15Q9NS87 1388 aa27.38■■□□□ 1.97
EXOSC4-201ENST00000316052 ILDR2Q71H61 639 aa27.38■■□□□ 1.97
EXOSC4-201ENST00000316052 SHANK2Q9UPX8 1470 aa27.37■■□□□ 1.97
EXOSC4-201ENST00000316052 CROCC2H7BZ55 1655 aa27.36■■□□□ 1.97
EXOSC4-201ENST00000316052 NPHP4O75161 1426 aaPredicted RBP27.35■■□□□ 1.97
EXOSC4-201ENST00000316052 MED14O60244 1454 aa27.35■■□□□ 1.97
EXOSC4-201ENST00000316052 DEPDC5O75140 1603 aa27.34■■□□□ 1.97
EXOSC4-201ENST00000316052 DAPK1P53355 1430 aa27.33■■□□□ 1.97
EXOSC4-201ENST00000316052 FGD6Q6ZV73 1430 aa27.33■■□□□ 1.97
EXOSC4-201ENST00000316052 VWDEQ8N2E2 1590 aa27.32■■□□□ 1.96
EXOSC4-201ENST00000316052 CPS1P31327 1500 aa27.31■■□□□ 1.96
EXOSC4-201ENST00000316052 ERBINQ96RT1 1412 aa27.31■■□□□ 1.96
EXOSC4-201ENST00000316052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.3■■□□□ 1.96
EXOSC4-201ENST00000316052 CHIC2Q9UKJ5 165 aa27.3■■□□□ 1.96
EXOSC4-201ENST00000316052 PRDM15P57071 1507 aaPredicted RBP27.29■■□□□ 1.96
EXOSC4-201ENST00000316052 IQGAP1P46940 1657 aa27.27■■□□□ 1.96
EXOSC4-201ENST00000316052 ARHGAP31Q2M1Z3 1444 aa27.27■■□□□ 1.96
EXOSC4-201ENST00000316052 UBR1Q8IWV7 1749 aa27.26■■□□□ 1.95
EXOSC4-201ENST00000316052 PIP4K2BP78356 416 aa27.24■■□□□ 1.95
EXOSC4-201ENST00000316052 TOM1O60784 492 aa27.23■■□□□ 1.95
EXOSC4-201ENST00000316052 ANKRD30AQ9BXX3 1397 aa27.22■■□□□ 1.95
EXOSC4-201ENST00000316052 LTKP29376 864 aa27.22■■□□□ 1.95
EXOSC4-201ENST00000316052 STRCP1A6NGW2 1772 aa27.22■■□□□ 1.95
EXOSC4-201ENST00000316052 SCAF1Q9H7N4 1312 aaKnown RBP27.21■■□□□ 1.95
EXOSC4-201ENST00000316052 HSPA1LP34931 641 aa27.19■■□□□ 1.94
EXOSC4-201ENST00000316052 KANK1Q14678 1352 aa27.19■■□□□ 1.94
EXOSC4-201ENST00000316052 TXNDC2Q86VQ3 553 aa27.18■■□□□ 1.94
EXOSC4-201ENST00000316052 ARHGAP23Q9P227 1491 aa27.18■■□□□ 1.94
EXOSC4-201ENST00000316052 SCAF11Q99590 1463 aaKnown RBP27.17■■□□□ 1.94
EXOSC4-201ENST00000316052 SLIT1O75093 1534 aa27.16■■□□□ 1.94
EXOSC4-201ENST00000316052 SOCS7O14512 581 aa27.15■■□□□ 1.94
EXOSC4-201ENST00000316052 FAM50AQ14320 339 aaKnown RBP27.15■■□□□ 1.94
EXOSC4-201ENST00000316052 ALKQ9UM73 1620 aa27.15■■□□□ 1.94
EXOSC4-201ENST00000316052 PIK3C2BO00750 1634 aa27.14■■□□□ 1.94
EXOSC4-201ENST00000316052 LRRC7Q96NW7 1537 aa27.14■■□□□ 1.94
EXOSC4-201ENST00000316052 LMTK2Q8IWU2 1503 aa27.13■■□□□ 1.93
EXOSC4-201ENST00000316052 IDI1Q13907 227 aa27.12■■□□□ 1.93
EXOSC4-201ENST00000316052 ADGRL2O95490 1459 aa27.12■■□□□ 1.93
EXOSC4-201ENST00000316052 EID1Q9Y6B2 187 aa27.1■■□□□ 1.93
EXOSC4-201ENST00000316052 TMEM2Q9UHN6 1383 aa27.09■■□□□ 1.93
EXOSC4-201ENST00000316052 STAG3Q9UJ98 1225 aa27.09■■□□□ 1.93
EXOSC4-201ENST00000316052 SYNMO15061 1565 aa27.06■■□□□ 1.92
EXOSC4-201ENST00000316052 NOS1P29475 1434 aa27.06■■□□□ 1.92
EXOSC4-201ENST00000316052 ANKRD50Q9ULJ7 1429 aa27.04■■□□□ 1.92
EXOSC4-201ENST00000316052 EFCAB6Q5THR3 1501 aa27.04■■□□□ 1.92
EXOSC4-201ENST00000316052 KDM5AP29375 1690 aaKnown RBP27.02■■□□□ 1.92
EXOSC4-201ENST00000316052 XIRP1Q702N8 1843 aaKnown RBP26.99■■□□□ 1.91
EXOSC4-201ENST00000316052 SENP3Q9H4L4 574 aaPredicted RBP26.98■■□□□ 1.91
EXOSC4-201ENST00000316052 SLC52A1Q9NWF4 448 aa26.98■■□□□ 1.91
EXOSC4-201ENST00000316052 MED1Q15648 1581 aaPredicted RBP26.97■■□□□ 1.91
EXOSC4-201ENST00000316052 SLC26A8Q96RN1 970 aa26.96■■□□□ 1.91
EXOSC4-201ENST00000316052 TET3O43151 1660 aa26.95■■□□□ 1.91
EXOSC4-201ENST00000316052 ADGRB3O60242 1522 aa26.94■■□□□ 1.9
EXOSC4-201ENST00000316052 RPRD2Q5VT52 1461 aaKnown RBP26.93■■□□□ 1.9
EXOSC4-201ENST00000316052 KCNA6P17658 529 aa26.92■■□□□ 1.9
EXOSC4-201ENST00000316052 MYO5BQ9ULV0 1848 aa26.89■■□□□ 1.9
EXOSC4-201ENST00000316052 TMEM94Q12767 1356 aa26.88■■□□□ 1.89
EXOSC4-201ENST00000316052 PPARGC1BQ86YN6 1023 aaKnown RBP26.87■■□□□ 1.89
EXOSC4-201ENST00000316052 RBM33Q96EV2 1170 aaKnown RBP26.87■■□□□ 1.89
EXOSC4-201ENST00000316052 ROCK1Q13464 1354 aa26.86■■□□□ 1.89
EXOSC4-201ENST00000316052 UNC13BO14795 1591 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms