RNA–Protein interactions for RNA: ENST00000314992.9

EXD1-201, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXD1, Length 2,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-201ENST00000314992 ROBO1Q9Y6N7 1651 aa9.16□□□□□ -0.94
EXD1-201ENST00000314992 COL16A1Q07092 1604 aaPredicted RBP9.16□□□□□ -0.94
EXD1-201ENST00000314992 DIEXFQ68CQ4 756 aaKnown RBP9.16□□□□□ -0.94
EXD1-201ENST00000314992 ZNF772Q68DY9 489 aaPredicted RBP9.16□□□□□ -0.94
EXD1-201ENST00000314992 ATP7AQ04656 1500 aa9.15□□□□□ -0.94
EXD1-201ENST00000314992 CENPBP07199 599 aaPredicted RBP9.15□□□□□ -0.95
EXD1-201ENST00000314992 CLSPNQ9HAW4 1339 aa9.14□□□□□ -0.95
EXD1-201ENST00000314992 JCADQ9P266 1359 aa9.13□□□□□ -0.95
EXD1-201ENST00000314992 CLIP1P30622 1438 aa9.13□□□□□ -0.95
EXD1-201ENST00000314992 ZNF316A6NFI3 1004 aaPredicted RBP9.13□□□□□ -0.95
EXD1-201ENST00000314992 LRP6O75581 1613 aa9.13□□□□□ -0.95
EXD1-201ENST00000314992 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.13□□□□□ -0.95
EXD1-201ENST00000314992 ABCC1P33527 1531 aa9.13□□□□□ -0.95
EXD1-201ENST00000314992 SPATA31A6Q5VVP1 1343 aa9.12□□□□□ -0.95
EXD1-201ENST00000314992 NLRP1Q9C000 1473 aa9.12□□□□□ -0.95
EXD1-201ENST00000314992 PHLPP1O60346 1717 aa9.12□□□□□ -0.95
EXD1-201ENST00000314992 NWD1Q149M9 1564 aa9.12□□□□□ -0.95
EXD1-201ENST00000314992 ABCC3O15438 1527 aa9.11□□□□□ -0.95
EXD1-201ENST00000314992 AHDC1Q5TGY3 1603 aaPredicted RBP9.11□□□□□ -0.95
EXD1-201ENST00000314992 EHMT2Q96KQ7 1210 aa9.11□□□□□ -0.95
EXD1-201ENST00000314992 MAP3K1Q13233 1512 aa9.1□□□□□ -0.95
EXD1-201ENST00000314992 UBTFP17480 764 aaKnown RBP9.1□□□□□ -0.95
EXD1-201ENST00000314992 ZRANB1Q9UGI0 708 aa9.1□□□□□ -0.95
EXD1-201ENST00000314992 NEUROD1Q13562 356 aa9.1□□□□□ -0.95
EXD1-201ENST00000314992 PRXQ9BXM0 1461 aa9.1□□□□□ -0.95
EXD1-201ENST00000314992 RGS12O14924 1447 aa9.09□□□□□ -0.95
EXD1-201ENST00000314992 DIP2AQ14689 1571 aa9.09□□□□□ -0.95
EXD1-201ENST00000314992 EFCAB2Q5VUJ9 269 aa9.08□□□□□ -0.96
EXD1-201ENST00000314992 CCDC125Q86Z20 511 aa9.08□□□□□ -0.96
EXD1-201ENST00000314992 PZPP20742 1482 aa9.07□□□□□ -0.96
EXD1-201ENST00000314992 PLEKHD1A6NEE1 506 aa9.07□□□□□ -0.96
EXD1-201ENST00000314992 CDC42BPBQ9Y5S2 1711 aa9.07□□□□□ -0.96
EXD1-201ENST00000314992 INO80Q9ULG1 1556 aaPredicted RBP9.07□□□□□ -0.96
EXD1-201ENST00000314992 CAMSAP2Q08AD1 1489 aa9.06□□□□□ -0.96
EXD1-201ENST00000314992 PREX2Q70Z35 1606 aa9.06□□□□□ -0.96
EXD1-201ENST00000314992 ATAD2Q6PL18 1390 aa9.06□□□□□ -0.96
EXD1-201ENST00000314992 RXRBP28702 533 aa9.06□□□□□ -0.96
EXD1-201ENST00000314992 ESF1Q9H501 851 aaKnown RBP9.06□□□□□ -0.96
EXD1-201ENST00000314992 SAMD9LQ8IVG5 1584 aa9.05□□□□□ -0.96
EXD1-201ENST00000314992 ANKLE2Q86XL3 938 aa9.05□□□□□ -0.96
EXD1-201ENST00000314992 RBM33Q96EV2 1170 aaKnown RBP9.05□□□□□ -0.96
EXD1-201ENST00000314992 ARHGAP23Q9P227 1491 aa9.04□□□□□ -0.96
EXD1-201ENST00000314992 ADGBQ8N7X0 1667 aa9.04□□□□□ -0.96
EXD1-201ENST00000314992 SLIT1O75093 1534 aa9.04□□□□□ -0.96
EXD1-201ENST00000314992 BCL9LQ86UU0 1499 aa9.03□□□□□ -0.96
EXD1-201ENST00000314992 TIAM1Q13009 1591 aa9.03□□□□□ -0.96
EXD1-201ENST00000314992 UGGT1Q9NYU2 1555 aa9.02□□□□□ -0.97
EXD1-201ENST00000314992 RRBP1Q9P2E9 1410 aaKnown RBP9.02□□□□□ -0.97
EXD1-201ENST00000314992 TNRQ92752 1358 aa9.02□□□□□ -0.97
EXD1-201ENST00000314992 NKTRP30414 1462 aaKnown RBP9.01□□□□□ -0.97
EXD1-201ENST00000314992 SPHKAPQ2M3C7 1700 aa9.01□□□□□ -0.97
EXD1-201ENST00000314992 NCOA3Q9Y6Q9 1424 aa9.01□□□□□ -0.97
EXD1-201ENST00000314992 KDM5AP29375 1690 aaKnown RBP9.01□□□□□ -0.97
EXD1-201ENST00000314992 UNC13BO14795 1591 aa9□□□□□ -0.97
EXD1-201ENST00000314992 GTF3C3Q9Y5Q9 886 aa9□□□□□ -0.97
EXD1-201ENST00000314992 THEMISQ8N1K5 641 aaPredicted RBP8.99□□□□□ -0.97
EXD1-201ENST00000314992 PRDM15P57071 1507 aaPredicted RBP8.99□□□□□ -0.97
EXD1-201ENST00000314992 ARHGAP5Q13017 1502 aa8.99□□□□□ -0.97
EXD1-201ENST00000314992 AFAP1Q8N556 730 aa8.98□□□□□ -0.97
EXD1-201ENST00000314992 UBR1Q8IWV7 1749 aa8.98□□□□□ -0.97
EXD1-201ENST00000314992 A2MP01023 1474 aa8.98□□□□□ -0.97
EXD1-201ENST00000314992 APLP2Q06481 763 aa8.98□□□□□ -0.97
EXD1-201ENST00000314992 MIA2Q96PC5 1412 aa8.97□□□□□ -0.97
EXD1-201ENST00000314992 MROH1Q8NDA8 1641 aa8.97□□□□□ -0.97
EXD1-201ENST00000314992 DHX57Q6P158 1386 aaKnown RBP8.97□□□□□ -0.97
EXD1-201ENST00000314992 RBM6P78332 1123 aaKnown RBP8.96□□□□□ -0.97
EXD1-201ENST00000314992 TRIM52Q96A61 297 aa8.96□□□□□ -0.97
EXD1-201ENST00000314992 SCAF11Q99590 1463 aaKnown RBP8.95□□□□□ -0.98
EXD1-201ENST00000314992 TET3O43151 1660 aa8.95□□□□□ -0.98
EXD1-201ENST00000314992 LAMC1P11047 1609 aa8.94□□□□□ -0.98
EXD1-201ENST00000314992 TROQ12816 1431 aaPredicted RBP8.94□□□□□ -0.98
EXD1-201ENST00000314992 KIAA1107Q9UPP5 1409 aa8.94□□□□□ -0.98
EXD1-201ENST00000314992 SLC34A2O95436 690 aa8.94□□□□□ -0.98
EXD1-201ENST00000314992 NCOA2Q15596 1464 aa8.93□□□□□ -0.98
EXD1-201ENST00000314992 SETD5Q9C0A6 1442 aa8.93□□□□□ -0.98
EXD1-201ENST00000314992 MIER1Q8N108 512 aa8.92□□□□□ -0.98
EXD1-201ENST00000314992 GPATCH8Q9UKJ3 1502 aaKnown RBP8.92□□□□□ -0.98
EXD1-201ENST00000314992 ARHGAP35Q9NRY4 1499 aa8.91□□□□□ -0.98
EXD1-201ENST00000314992 PCDH10Q9P2E7 1040 aa8.91□□□□□ -0.98
EXD1-201ENST00000314992 HNRNPUL2Q1KMD3 747 aaKnown RBP8.91□□□□□ -0.98
EXD1-201ENST00000314992 CDC42BPAQ5VT25 1732 aa8.91□□□□□ -0.98
EXD1-201ENST00000314992 BLMP54132 1417 aaPredicted RBP8.91□□□□□ -0.98
EXD1-201ENST00000314992 RTEL1-TNFRSF6BF6WH68 1400 aa8.9□□□□□ -0.98
EXD1-201ENST00000314992 ATRNO75882 1429 aa8.9□□□□□ -0.98
EXD1-201ENST00000314992 TMEM94Q12767 1356 aa8.9□□□□□ -0.99
EXD1-201ENST00000314992 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.9□□□□□ -0.99
EXD1-201ENST00000314992 YY1P25490 414 aa8.89□□□□□ -0.99
EXD1-201ENST00000314992 PLEKHH2Q8IVE3 1493 aa8.89□□□□□ -0.99
EXD1-201ENST00000314992 CCNB3Q8WWL7 1395 aa8.88□□□□□ -0.99
EXD1-201ENST00000314992 AFF2P51816 1311 aa8.88□□□□□ -0.99
EXD1-201ENST00000314992 KCNA6P17658 529 aa8.87□□□□□ -0.99
EXD1-201ENST00000314992 BCL11AQ9H165 835 aa8.87□□□□□ -0.99
EXD1-201ENST00000314992 ARID3CA6NKF2 412 aa8.87□□□□□ -0.99
EXD1-201ENST00000314992 COL22A1Q8NFW1 1626 aaPredicted RBP8.86□□□□□ -0.99
EXD1-201ENST00000314992 CHD2O14647 1828 aaKnown RBP8.86□□□□□ -0.99
EXD1-201ENST00000314992 NGLY1Q96IV0 654 aa8.86□□□□□ -0.99
EXD1-201ENST00000314992 TIMELESSQ9UNS1 1208 aa8.85□□□□□ -0.99
EXD1-201ENST00000314992 KANK4Q5T7N3 995 aaPredicted RBP8.85□□□□□ -0.99
EXD1-201ENST00000314992 ERVK-7P63135 1459 aa8.85□□□□□ -0.99
EXD1-201ENST00000314992 RALGAPBQ86X10 1494 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms