RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 TDRD9Q8NDG6 1382 aaKnown RBP26.07■■□□□ 1.76
KDM3B-201ENST00000314358 TPM3P06753 285 aa26.06■■□□□ 1.76
KDM3B-201ENST00000314358 TCERG1O14776 1098 aaKnown RBP26.06■■□□□ 1.76
KDM3B-201ENST00000314358 PMFBP1Q8TBY8 1022 aa26.06■■□□□ 1.76
KDM3B-201ENST00000314358 ROCK2O75116 1388 aaKnown RBP26.06■■□□□ 1.76
KDM3B-201ENST00000314358 IPO9Q96P70 1041 aaKnown RBP26.05■■□□□ 1.76
KDM3B-201ENST00000314358 RRP7AQ9Y3A4 280 aaKnown RBP26.05■■□□□ 1.76
KDM3B-201ENST00000314358 BCL11BQ9C0K0 894 aaPredicted RBP26.04■■□□□ 1.76
KDM3B-201ENST00000314358 TSHZ2Q9NRE2 1034 aa26.04■■□□□ 1.76
KDM3B-201ENST00000314358 RILPL2Q969X0 211 aa26.03■■□□□ 1.76
KDM3B-201ENST00000314358 CCER2I3L3R5 266 aa26.03■■□□□ 1.76
KDM3B-201ENST00000314358 TPD52L1Q16890 204 aaPredicted RBP26.03■■□□□ 1.76
KDM3B-201ENST00000314358 SPAG9O60271 1321 aaKnown RBP26.02■■□□□ 1.76
KDM3B-201ENST00000314358 ZNF592Q92610 1267 aa26.01■■□□□ 1.75
KDM3B-201ENST00000314358 KIF16BQ96L93 1317 aa26.01■■□□□ 1.75
KDM3B-201ENST00000314358 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.01■■□□□ 1.75
KDM3B-201ENST00000314358 VPS8Q8N3P4 1428 aa26■■□□□ 1.75
KDM3B-201ENST00000314358 RAD21O60216 631 aa26■■□□□ 1.75
KDM3B-201ENST00000314358 BCL2L13Q9BXK5 485 aa25.99■■□□□ 1.75
KDM3B-201ENST00000314358 SETD5Q9C0A6 1442 aa25.99■■□□□ 1.75
KDM3B-201ENST00000314358 ELL2O00472 640 aaPredicted RBP25.99■■□□□ 1.75
KDM3B-201ENST00000314358 H3BQV1 296 aa25.98■■□□□ 1.75
KDM3B-201ENST00000314358 HSP90AA2PQ14568 343 aaPredicted RBP25.98■■□□□ 1.75
KDM3B-201ENST00000314358 IFFO2Q5TF58 517 aa25.98■■□□□ 1.75
KDM3B-201ENST00000314358 CCDC34Q96HJ3 373 aa25.97■■□□□ 1.75
KDM3B-201ENST00000314358 CSPP1Q1MSJ5 1256 aa25.97■■□□□ 1.75
KDM3B-201ENST00000314358 PLIN1O60240 522 aa25.95■■□□□ 1.74
KDM3B-201ENST00000314358 HMMRO75330 724 aa25.94■■□□□ 1.74
KDM3B-201ENST00000314358 GTF2E1P29083 439 aaPredicted RBP25.94■■□□□ 1.74
KDM3B-201ENST00000314358 FBXW7Q969H0 707 aa25.93■■□□□ 1.74
KDM3B-201ENST00000314358 KANK4Q5T7N3 995 aaPredicted RBP25.93■■□□□ 1.74
KDM3B-201ENST00000314358 FMN1Q68DA7 1419 aa25.93■■□□□ 1.74
KDM3B-201ENST00000314358 NGEFQ8N5V2 710 aa25.93■■□□□ 1.74
KDM3B-201ENST00000314358 MCTP1Q6DN14 999 aa25.93■■□□□ 1.74
KDM3B-201ENST00000314358 ST18O60284 1047 aa25.92■■□□□ 1.74
KDM3B-201ENST00000314358 VSIG10Q8N0Z9 540 aa25.92■■□□□ 1.74
KDM3B-201ENST00000314358 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
KDM3B-201ENST00000314358 CENPJQ9HC77 1338 aaPredicted RBP25.91■■□□□ 1.74
KDM3B-201ENST00000314358 EFCAB2Q5VUJ9 269 aa25.91■■□□□ 1.74
KDM3B-201ENST00000314358 TIMELESSQ9UNS1 1208 aa25.9■■□□□ 1.74
KDM3B-201ENST00000314358 FAM184AQ8NB25 1140 aa25.89■■□□□ 1.74
KDM3B-201ENST00000314358 DDX49Q9Y6V7 483 aaKnown RBP25.89■■□□□ 1.74
KDM3B-201ENST00000314358 PHF14O94880 888 aa25.89■■□□□ 1.74
KDM3B-201ENST00000314358 ANKRD45Q5TZF3 282 aa25.88■■□□□ 1.73
KDM3B-201ENST00000314358 AMPHP49418 695 aa25.88■■□□□ 1.73
KDM3B-201ENST00000314358 HNRNPMP52272 730 aaKnown RBP eCLIP25.88■■□□□ 1.731e-6■■■■□ 25.9
KDM3B-201ENST00000314358 SETQ01105 290 aaPredicted RBP25.88■■□□□ 1.73
KDM3B-201ENST00000314358 GOLGA6L19H0YKK7 550 aa25.87■■□□□ 1.73
KDM3B-201ENST00000314358 ZNF771Q7L3S4 317 aaPredicted RBP25.87■■□□□ 1.73
KDM3B-201ENST00000314358 PCMTD1Q96MG8 357 aaPredicted RBP25.86■■□□□ 1.73
KDM3B-201ENST00000314358 FOSBP53539 338 aa25.86■■□□□ 1.73
KDM3B-201ENST00000314358 NGDNQ8NEJ9 315 aaKnown RBP25.86■■□□□ 1.73
KDM3B-201ENST00000314358 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
KDM3B-201ENST00000314358 RALBP1Q15311 655 aa25.85■■□□□ 1.73
KDM3B-201ENST00000314358 TSR1Q2NL82 804 aaKnown RBP25.85■■□□□ 1.73
KDM3B-201ENST00000314358 KIF3BO15066 747 aa25.84■■□□□ 1.73
KDM3B-201ENST00000314358 WIZO95785 1651 aa25.84■■□□□ 1.73
KDM3B-201ENST00000314358 BECN2A8MW95 431 aa25.84■■□□□ 1.73
KDM3B-201ENST00000314358 NECTIN2Q92692 538 aa25.84■■□□□ 1.73
KDM3B-201ENST00000314358 ANKRD30AQ9BXX3 1397 aa25.83■■□□□ 1.72
KDM3B-201ENST00000314358 NUP155O75694 1391 aa25.81■■□□□ 1.72
KDM3B-201ENST00000314358 MPHOSPH9Q99550 1183 aa25.79■■□□□ 1.72
KDM3B-201ENST00000314358 MSH5O43196 834 aa25.79■■□□□ 1.72
KDM3B-201ENST00000314358 AKAP17AQ02040 695 aaKnown RBP25.79■■□□□ 1.72
KDM3B-201ENST00000314358 DDX11L8A8MPP1 907 aa25.78■■□□□ 1.72
KDM3B-201ENST00000314358 RAPGEF2Q9Y4G8 1499 aa25.77■■□□□ 1.72
KDM3B-201ENST00000314358 SAMD1Q6SPF0 538 aaPredicted RBP25.77■■□□□ 1.72
KDM3B-201ENST00000314358 EID1Q9Y6B2 187 aa25.75■■□□□ 1.71
KDM3B-201ENST00000314358 FAM13BQ9NYF5 915 aa25.74■■□□□ 1.71
KDM3B-201ENST00000314358 TRAK1Q9UPV9 953 aa25.74■■□□□ 1.71
KDM3B-201ENST00000314358 FHOD3Q2V2M9 1422 aa25.73■■□□□ 1.71
KDM3B-201ENST00000314358 EIF2S2P20042 333 aaKnown RBP25.73■■□□□ 1.71
KDM3B-201ENST00000314358 TCEAL9Q9UHQ7 104 aa25.73■■□□□ 1.71
KDM3B-201ENST00000314358 TPM2P07951 284 aa25.72■■□□□ 1.71
KDM3B-201ENST00000314358 KIF3AQ9Y496 699 aa25.72■■□□□ 1.71
KDM3B-201ENST00000314358 WASHC2CQ9Y4E1 1318 aa25.72■■□□□ 1.71
KDM3B-201ENST00000314358 KDM4AO75164 1064 aa25.72■■□□□ 1.71
KDM3B-201ENST00000314358 RAB3GAP2Q9H2M9 1393 aa25.71■■□□□ 1.71
KDM3B-201ENST00000314358 EXOC6Q8TAG9 804 aa25.71■■□□□ 1.71
KDM3B-201ENST00000314358 TERF2IPQ9NYB0 399 aa25.71■■□□□ 1.71
KDM3B-201ENST00000314358 CRBNQ96SW2 442 aa25.71■■□□□ 1.71
KDM3B-201ENST00000314358 APPP05067 770 aa25.71■■□□□ 1.71
KDM3B-201ENST00000314358 TPM1P09493 284 aa25.71■■□□□ 1.71
KDM3B-201ENST00000314358 DHX16O60231 1041 aaKnown RBP25.7■■□□□ 1.7
KDM3B-201ENST00000314358 USP35Q9P2H5 1018 aa25.7■■□□□ 1.7
KDM3B-201ENST00000314358 PDE4AP27815 886 aa25.7■■□□□ 1.7
KDM3B-201ENST00000314358 ANO2Q9NQ90 1003 aa25.7■■□□□ 1.7
KDM3B-201ENST00000314358 HOMER1Q86YM7 354 aa25.69■■□□□ 1.7
KDM3B-201ENST00000314358 GSE1Q14687 1217 aa25.69■■□□□ 1.7
KDM3B-201ENST00000314358 COG6Q9Y2V7 657 aa25.69■■□□□ 1.7
KDM3B-201ENST00000314358 ATAD2BQ9ULI0 1458 aa25.67■■□□□ 1.7
KDM3B-201ENST00000314358 CCDC70Q6NSX1 233 aa25.67■■□□□ 1.7
KDM3B-201ENST00000314358 DIAPH3Q9NSV4 1193 aa25.67■■□□□ 1.7
KDM3B-201ENST00000314358 SYNE3Q6ZMZ3 975 aa25.66■■□□□ 1.7
KDM3B-201ENST00000314358 CNKSR2Q8WXI2 1034 aa25.66■■□□□ 1.7
KDM3B-201ENST00000314358 HDAC5Q9UQL6 1122 aa25.65■■□□□ 1.7
KDM3B-201ENST00000314358 CCDC18Q5T9S5 1454 aa25.65■■□□□ 1.7
KDM3B-201ENST00000314358 BICD2Q8TD16 824 aa25.64■■□□□ 1.7
KDM3B-201ENST00000314358 FAM161AQ3B820 660 aa25.64■■□□□ 1.69
KDM3B-201ENST00000314358 EIF3AQ14152 1382 aaKnown RBP25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms