RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 PLIN1O60240 522 aa8.03□□□□□ -1.12
PRKDC-201ENST00000314191 VGFO15240 615 aaPredicted RBP8.03□□□□□ -1.12
PRKDC-201ENST00000314191 NUTM2FA1L443 756 aa8.03□□□□□ -1.12
PRKDC-201ENST00000314191 EIF3AQ14152 1382 aaKnown RBP8.03□□□□□ -1.12
PRKDC-201ENST00000314191 MAP3K1Q13233 1512 aa8.03□□□□□ -1.12
PRKDC-201ENST00000314191 BIVM-ERCC5R4GMW8 1640 aa8.03□□□□□ -1.12
PRKDC-201ENST00000314191 APAF1O14727 1248 aa8.02□□□□□ -1.12
PRKDC-201ENST00000314191 RRP7AQ9Y3A4 280 aaKnown RBP8.02□□□□□ -1.12
PRKDC-201ENST00000314191 GRIN2AQ12879 1464 aa8.02□□□□□ -1.13
PRKDC-201ENST00000314191 FAM69CQ0P6D2 419 aa8.02□□□□□ -1.13
PRKDC-201ENST00000314191 C9orf84Q5VXU9 1444 aa8.02□□□□□ -1.13
PRKDC-201ENST00000314191 EXOC6Q8TAG9 804 aa8.02□□□□□ -1.13
PRKDC-201ENST00000314191 ROCK1Q13464 1354 aa8.02□□□□□ -1.13
PRKDC-201ENST00000314191 ANKRD30BQ9BXX2 1392 aa8.02□□□□□ -1.13
PRKDC-201ENST00000314191 RAPGEF3O95398 923 aa8.02□□□□□ -1.13
PRKDC-201ENST00000314191 ZBED9Q6R2W3 1325 aa8.02□□□□□ -1.13
PRKDC-201ENST00000314191 MINK1Q8N4C8 1332 aaPredicted RBP8.01□□□□□ -1.13
PRKDC-201ENST00000314191 PDE3BQ13370 1112 aa8.01□□□□□ -1.13
PRKDC-201ENST00000314191 CLUAP1Q96AJ1 413 aa8.01□□□□□ -1.13
PRKDC-201ENST00000314191 SCAPERQ9BY12 1400 aa8.01□□□□□ -1.13
PRKDC-201ENST00000314191 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.01□□□□□ -1.13
PRKDC-201ENST00000314191 TERF2IPQ9NYB0 399 aa8□□□□□ -1.13
PRKDC-201ENST00000314191 ARHGEF11O15085 1522 aa8□□□□□ -1.13
PRKDC-201ENST00000314191 MYH16Q9H6N6 1097 aa7.99□□□□□ -1.13
PRKDC-201ENST00000314191 HSP90AA1P07900 732 aaKnown RBP7.99□□□□□ -1.13
PRKDC-201ENST00000314191 ARHGAP5Q13017 1502 aa7.99□□□□□ -1.13
PRKDC-201ENST00000314191 IQGAP2Q13576 1575 aa7.99□□□□□ -1.13
PRKDC-201ENST00000314191 AKNAQ7Z591 1439 aa7.99□□□□□ -1.13
PRKDC-201ENST00000314191 NCOA1Q15788 1441 aa7.99□□□□□ -1.13
PRKDC-201ENST00000314191 WDR97A6NE52 1622 aa7.98□□□□□ -1.13
PRKDC-201ENST00000314191 CENPJQ9HC77 1338 aaPredicted RBP7.98□□□□□ -1.13
PRKDC-201ENST00000314191 STAC3Q96MF2 364 aa7.98□□□□□ -1.13
PRKDC-201ENST00000314191 MAGI1Q96QZ7 1491 aaPredicted RBP7.98□□□□□ -1.13
PRKDC-201ENST00000314191 CDCA7LQ96GN5 454 aa7.98□□□□□ -1.13
PRKDC-201ENST00000314191 PNNQ9H307 717 aaKnown RBP7.98□□□□□ -1.13
PRKDC-201ENST00000314191 RRP1P56182 461 aaKnown RBP7.98□□□□□ -1.13
PRKDC-201ENST00000314191 NOP58Q9Y2X3 529 aaKnown RBP7.97□□□□□ -1.13
PRKDC-201ENST00000314191 BCL2L13Q9BXK5 485 aa7.97□□□□□ -1.13
PRKDC-201ENST00000314191 DDRGK1Q96HY6 314 aa7.97□□□□□ -1.13
PRKDC-201ENST00000314191 HECW1Q76N89 1606 aa7.97□□□□□ -1.13
PRKDC-201ENST00000314191 ARXQ96QS3 562 aa7.97□□□□□ -1.13
PRKDC-201ENST00000314191 EVC2Q86UK5 1308 aa7.96□□□□□ -1.13
PRKDC-201ENST00000314191 GGNBP2Q9H3C7 697 aa7.96□□□□□ -1.13
PRKDC-201ENST00000314191 CRBNQ96SW2 442 aa7.96□□□□□ -1.14
PRKDC-201ENST00000314191 ADAMTS8Q9UP79 889 aa7.96□□□□□ -1.14
PRKDC-201ENST00000314191 PNISRQ8TF01 805 aaKnown RBP7.96□□□□□ -1.14
PRKDC-201ENST00000314191 ELL2O00472 640 aaPredicted RBP7.95□□□□□ -1.14
PRKDC-201ENST00000314191 CABP2Q9NPB3 220 aa7.95□□□□□ -1.14
PRKDC-201ENST00000314191 MS4A1P11836 297 aa7.95□□□□□ -1.14
PRKDC-201ENST00000314191 SMC4Q9NTJ3 1288 aa7.95□□□□□ -1.14
PRKDC-201ENST00000314191 PAK3O75914 559 aaPredicted RBP7.95□□□□□ -1.14
PRKDC-201ENST00000314191 CAMSAP2Q08AD1 1489 aa7.95□□□□□ -1.14
PRKDC-201ENST00000314191 TCERG1O14776 1098 aaKnown RBP7.95□□□□□ -1.14
PRKDC-201ENST00000314191 SLC12A5Q9H2X9 1139 aa7.94□□□□□ -1.14
PRKDC-201ENST00000314191 PPP2R1AP30153 589 aa7.94□□□□□ -1.14
PRKDC-201ENST00000314191 NGDNQ8NEJ9 315 aaKnown RBP7.94□□□□□ -1.14
PRKDC-201ENST00000314191 MAPKBP1O60336 1514 aa7.94□□□□□ -1.14
PRKDC-201ENST00000314191 NUP153P49790 1475 aaKnown RBP7.94□□□□□ -1.14
PRKDC-201ENST00000314191 CGNL1Q0VF96 1302 aa7.94□□□□□ -1.14
PRKDC-201ENST00000314191 ITPRIPQ8IWB1 547 aa7.93□□□□□ -1.14
PRKDC-201ENST00000314191 ATP10BO94823 1461 aa7.93□□□□□ -1.14
PRKDC-201ENST00000314191 BRD4O60885 1362 aaPredicted RBP7.93□□□□□ -1.14
PRKDC-201ENST00000314191 COG6Q9Y2V7 657 aa7.93□□□□□ -1.14
PRKDC-201ENST00000314191 E9PSI1 815 aa7.93□□□□□ -1.14
PRKDC-201ENST00000314191 GPATCH8Q9UKJ3 1502 aaKnown RBP7.93□□□□□ -1.14
PRKDC-201ENST00000314191 HAP1P54257 671 aaPredicted RBP7.93□□□□□ -1.14
PRKDC-201ENST00000314191 EID1Q9Y6B2 187 aa7.92□□□□□ -1.14
PRKDC-201ENST00000314191 RPRD2Q5VT52 1461 aaKnown RBP7.92□□□□□ -1.14
PRKDC-201ENST00000314191 A0A0G2JS52 829 aa7.92□□□□□ -1.14
PRKDC-201ENST00000314191 BECN1Q14457 450 aa7.92□□□□□ -1.14
PRKDC-201ENST00000314191 MTHFSP49914 203 aa7.92□□□□□ -1.14
PRKDC-201ENST00000314191 PLEKHH2Q8IVE3 1493 aa7.92□□□□□ -1.14
PRKDC-201ENST00000314191 CUL7Q14999 1698 aa7.91□□□□□ -1.14
PRKDC-201ENST00000314191 CCDC141Q6ZP82 1450 aa7.91□□□□□ -1.14
PRKDC-201ENST00000314191 RWDD1Q9H446 243 aaPredicted RBP7.91□□□□□ -1.14
PRKDC-201ENST00000314191 DIAPH1O60610 1272 aaKnown RBP7.91□□□□□ -1.14
PRKDC-201ENST00000314191 RTF1Q92541 710 aaKnown RBP7.91□□□□□ -1.14
PRKDC-201ENST00000314191 PRDM2Q13029 1718 aa7.91□□□□□ -1.14
PRKDC-201ENST00000314191 APBB1O00213 710 aa7.91□□□□□ -1.14
PRKDC-201ENST00000314191 ADGRF5Q8IZF2 1346 aa7.91□□□□□ -1.14
PRKDC-201ENST00000314191 PDE4AP27815 886 aa7.9□□□□□ -1.14
PRKDC-201ENST00000314191 IPO8O15397 1037 aaKnown RBP7.9□□□□□ -1.14
PRKDC-201ENST00000314191 THOC2Q8NI27 1593 aaKnown RBP7.9□□□□□ -1.14
PRKDC-201ENST00000314191 PRAM1Q96QH2 718 aa7.89□□□□□ -1.15
PRKDC-201ENST00000314191 AMPHP49418 695 aa7.89□□□□□ -1.15
PRKDC-201ENST00000314191 LTV1Q96GA3 475 aaPredicted RBP7.89□□□□□ -1.15
PRKDC-201ENST00000314191 TCP11L2Q8N4U5 519 aa7.89□□□□□ -1.15
PRKDC-201ENST00000314191 RUNDC1Q96C34 613 aa7.89□□□□□ -1.15
PRKDC-201ENST00000314191 UGGT2Q9NYU1 1516 aa7.89□□□□□ -1.15
PRKDC-201ENST00000314191 ERBINQ96RT1 1412 aa7.89□□□□□ -1.15
PRKDC-201ENST00000314191 PMFBP1Q8TBY8 1022 aa7.89□□□□□ -1.15
PRKDC-201ENST00000314191 CHMP4BQ9H444 224 aaKnown RBP7.88□□□□□ -1.15
PRKDC-201ENST00000314191 COG3Q96JB2 828 aa7.88□□□□□ -1.15
PRKDC-201ENST00000314191 TXNDC2Q86VQ3 553 aa7.88□□□□□ -1.15
PRKDC-201ENST00000314191 PTPN23Q9H3S7 1636 aa7.88□□□□□ -1.15
PRKDC-201ENST00000314191 UNC13AQ9UPW8 1703 aa7.88□□□□□ -1.15
PRKDC-201ENST00000314191 RIPK4P57078 832 aa7.88□□□□□ -1.15
PRKDC-201ENST00000314191 SPRYD3Q8NCJ5 442 aa7.88□□□□□ -1.15
PRKDC-201ENST00000314191 CALD1Q05682 793 aaKnown RBP7.87□□□□□ -1.15
PRKDC-201ENST00000314191 IPO9Q96P70 1041 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms