RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
ZNF541-202ENST00000314121 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
ZNF541-202ENST00000314121 KCNJ4P48050 445 aa17.5■□□□□ 0.39
ZNF541-202ENST00000314121 NGEFQ8N5V2 710 aa17.49■□□□□ 0.39
ZNF541-202ENST00000314121 SLC4A3P48751 1232 aa17.49■□□□□ 0.39
ZNF541-202ENST00000314121 GAPVD1Q14C86 1478 aa17.48■□□□□ 0.39
ZNF541-202ENST00000314121 NCOA2Q15596 1464 aa17.48■□□□□ 0.39
ZNF541-202ENST00000314121 HDGFP51858 240 aaKnown RBP17.48■□□□□ 0.39
ZNF541-202ENST00000314121 TERF2IPQ9NYB0 399 aa17.48■□□□□ 0.39
ZNF541-202ENST00000314121 ZNF644Q9H582 1327 aaPredicted RBP17.47■□□□□ 0.39
ZNF541-202ENST00000314121 RAD54L2Q9Y4B4 1467 aa17.47■□□□□ 0.39
ZNF541-202ENST00000314121 APAF1O14727 1248 aa17.47■□□□□ 0.39
ZNF541-202ENST00000314121 FYCO1Q9BQS8 1478 aa17.46■□□□□ 0.39
ZNF541-202ENST00000314121 APBB1O00213 710 aa17.46■□□□□ 0.39
ZNF541-202ENST00000314121 GOLGA6L4A6NEF3 574 aa17.46■□□□□ 0.38
ZNF541-202ENST00000314121 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.38
ZNF541-202ENST00000314121 FGD1P98174 961 aa17.45■□□□□ 0.38
ZNF541-202ENST00000314121 BRD4O60885 1362 aaPredicted RBP17.44■□□□□ 0.38
ZNF541-202ENST00000314121 RRP7AQ9Y3A4 280 aaKnown RBP17.44■□□□□ 0.38
ZNF541-202ENST00000314121 COG6Q9Y2V7 657 aa17.43■□□□□ 0.38
ZNF541-202ENST00000314121 MIA2Q96PC5 1412 aa17.43■□□□□ 0.38
ZNF541-202ENST00000314121 SOX12O15370 315 aa17.43■□□□□ 0.38
ZNF541-202ENST00000314121 TRAK1Q9UPV9 953 aa17.43■□□□□ 0.38
ZNF541-202ENST00000314121 CHAF1AQ13111 956 aaPredicted RBP17.42■□□□□ 0.38
ZNF541-202ENST00000314121 ZKSCAN2Q63HK3 967 aa17.41■□□□□ 0.38
ZNF541-202ENST00000314121 BCL2L13Q9BXK5 485 aa17.41■□□□□ 0.38
ZNF541-202ENST00000314121 HFM1A2PYH4 1435 aa17.4■□□□□ 0.38
ZNF541-202ENST00000314121 ANKRD50Q9ULJ7 1429 aa17.39■□□□□ 0.37
ZNF541-202ENST00000314121 NRDCO43847 1150 aa17.39■□□□□ 0.37
ZNF541-202ENST00000314121 DDX11L8A8MPP1 907 aa17.39■□□□□ 0.37
ZNF541-202ENST00000314121 KIAA1211Q6ZU35 1233 aa17.39■□□□□ 0.37
ZNF541-202ENST00000314121 CFTRP13569 1480 aa17.38■□□□□ 0.37
ZNF541-202ENST00000314121 HMMRO75330 724 aa17.38■□□□□ 0.37
ZNF541-202ENST00000314121 TOP2BQ02880 1626 aa17.38■□□□□ 0.37
ZNF541-202ENST00000314121 GOLGA6L6A8MZA4 724 aa17.38■□□□□ 0.37
ZNF541-202ENST00000314121 STAC3Q96MF2 364 aa17.37■□□□□ 0.37
ZNF541-202ENST00000314121 LMOD3Q0VAK6 560 aa17.37■□□□□ 0.37
ZNF541-202ENST00000314121 SYAP1Q96A49 352 aaPredicted RBP17.37■□□□□ 0.37
ZNF541-202ENST00000314121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.37■□□□□ 0.37
ZNF541-202ENST00000314121 PTPRGP23470 1445 aa17.37■□□□□ 0.37
ZNF541-202ENST00000314121 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
ZNF541-202ENST00000314121 LMOD2Q6P5Q4 547 aa17.36■□□□□ 0.37
ZNF541-202ENST00000314121 NBPF8Q3BBV2 869 aa17.36■□□□□ 0.37
ZNF541-202ENST00000314121 KIAA2012Q0VF49 1180 aa17.35■□□□□ 0.37
ZNF541-202ENST00000314121 TIAM1Q13009 1591 aa17.35■□□□□ 0.37
ZNF541-202ENST00000314121 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
ZNF541-202ENST00000314121 MLECQ14165 292 aa17.35■□□□□ 0.37
ZNF541-202ENST00000314121 STK31Q9BXU1 1019 aa17.34■□□□□ 0.37
ZNF541-202ENST00000314121 PNISRQ8TF01 805 aaKnown RBP17.33■□□□□ 0.37
ZNF541-202ENST00000314121 RSPH6AQ9H0K4 717 aa17.33■□□□□ 0.36
ZNF541-202ENST00000314121 CHMP4AQ9BY43 222 aa17.32■□□□□ 0.36
ZNF541-202ENST00000314121 EFCAB5A4FU69 1503 aa17.32■□□□□ 0.36
ZNF541-202ENST00000314121 ST18O60284 1047 aa17.32■□□□□ 0.36
ZNF541-202ENST00000314121 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
ZNF541-202ENST00000314121 A0A0G2JS52 829 aa17.32■□□□□ 0.36
ZNF541-202ENST00000314121 CDCA7LQ96GN5 454 aa17.32■□□□□ 0.36
ZNF541-202ENST00000314121 ADAMTS8Q9UP79 889 aa17.32■□□□□ 0.36
ZNF541-202ENST00000314121 AAMPQ13685 434 aa17.31■□□□□ 0.36
ZNF541-202ENST00000314121 NFKBIBQ15653 356 aa17.31■□□□□ 0.36
ZNF541-202ENST00000314121 CCDC184Q52MB2 194 aa17.31■□□□□ 0.36
ZNF541-202ENST00000314121 NAP1L2Q9ULW6 460 aaPredicted RBP17.31■□□□□ 0.36
ZNF541-202ENST00000314121 DDX19BQ9UMR2 479 aa17.31■□□□□ 0.36
ZNF541-202ENST00000314121 EVC2Q86UK5 1308 aa17.3■□□□□ 0.36
ZNF541-202ENST00000314121 SKOR2Q2VWA4 1001 aaPredicted RBP17.3■□□□□ 0.36
ZNF541-202ENST00000314121 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
ZNF541-202ENST00000314121 NUTM2DQ5VT03 806 aaPredicted RBP17.29■□□□□ 0.36
ZNF541-202ENST00000314121 DZIP1LQ8IYY4 767 aaKnown RBP17.29■□□□□ 0.36
ZNF541-202ENST00000314121 VGFO15240 615 aaPredicted RBP17.29■□□□□ 0.36
ZNF541-202ENST00000314121 DRC7Q8IY82 874 aa17.29■□□□□ 0.36
ZNF541-202ENST00000314121 AKNAQ7Z591 1439 aa17.29■□□□□ 0.36
ZNF541-202ENST00000314121 CHMP5Q9NZZ3 219 aa17.28■□□□□ 0.36
ZNF541-202ENST00000314121 RUNDC1Q96C34 613 aa17.28■□□□□ 0.36
ZNF541-202ENST00000314121 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
ZNF541-202ENST00000314121 TRIM6-TRIM34B2RNG4 842 aa17.27■□□□□ 0.36
ZNF541-202ENST00000314121 DDX49Q9Y6V7 483 aaKnown RBP17.27■□□□□ 0.36
ZNF541-202ENST00000314121 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.35
ZNF541-202ENST00000314121 SLC4A10Q6U841 1118 aa17.27■□□□□ 0.35
ZNF541-202ENST00000314121 ELL2O00472 640 aaPredicted RBP17.26■□□□□ 0.35
ZNF541-202ENST00000314121 CDK11BP21127 795 aaKnown RBP17.26■□□□□ 0.35
ZNF541-202ENST00000314121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.25■□□□□ 0.35
ZNF541-202ENST00000314121 NAIPQ13075 1403 aa17.25■□□□□ 0.35
ZNF541-202ENST00000314121 BACH2Q9BYV9 841 aa17.25■□□□□ 0.35
ZNF541-202ENST00000314121 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
ZNF541-202ENST00000314121 PRKCSHP14314 528 aaPredicted RBP17.24■□□□□ 0.35
ZNF541-202ENST00000314121 HDAC5Q9UQL6 1122 aa17.24■□□□□ 0.35
ZNF541-202ENST00000314121 EHBP1L1Q8N3D4 1523 aa17.24■□□□□ 0.35
ZNF541-202ENST00000314121 HTATSF1O43719 755 aaKnown RBP17.22■□□□□ 0.35
ZNF541-202ENST00000314121 TAOK2Q9UL54 1235 aa17.22■□□□□ 0.35
ZNF541-202ENST00000314121 PANK1Q8TE04 598 aa17.22■□□□□ 0.35
ZNF541-202ENST00000314121 ANO8Q9HCE9 1232 aaPredicted RBP17.22■□□□□ 0.35
ZNF541-202ENST00000314121 PPP2R1AP30153 589 aa17.21■□□□□ 0.35
ZNF541-202ENST00000314121 PHF14O94880 888 aa17.21■□□□□ 0.35
ZNF541-202ENST00000314121 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.35
ZNF541-202ENST00000314121 CSPP1Q1MSJ5 1256 aa17.2■□□□□ 0.34
ZNF541-202ENST00000314121 DIAPH1O60610 1272 aaKnown RBP17.2■□□□□ 0.34
ZNF541-202ENST00000314121 NBPF1Q3BBV0 1214 aa17.2■□□□□ 0.34
ZNF541-202ENST00000314121 HSP90AA2PQ14568 343 aaPredicted RBP17.2■□□□□ 0.34
ZNF541-202ENST00000314121 KIF16BQ96L93 1317 aa17.2■□□□□ 0.34
ZNF541-202ENST00000314121 RIPK4P57078 832 aa17.19■□□□□ 0.34
ZNF541-202ENST00000314121 C22orf23Q9BZE7 217 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms