RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 KDM5CP41229 1560 aa23.8■■□□□ 1.4
CLCF1-201ENST00000312438 RAPGEF3O95398 923 aa23.79■■□□□ 1.4
CLCF1-201ENST00000312438 KANK1Q14678 1352 aa23.77■■□□□ 1.4
CLCF1-201ENST00000312438 DIP2BQ9P265 1576 aa23.76■■□□□ 1.39
CLCF1-201ENST00000312438 KIDINS220Q9ULH0 1771 aa23.76■■□□□ 1.39
CLCF1-201ENST00000312438 A2MP01023 1474 aa23.75■■□□□ 1.39
CLCF1-201ENST00000312438 CCDC144AA2RUR9 1427 aa23.73■■□□□ 1.39
CLCF1-201ENST00000312438 NBPF8Q3BBV2 869 aa23.73■■□□□ 1.39
CLCF1-201ENST00000312438 ATP10AO60312 1499 aa23.72■■□□□ 1.39
CLCF1-201ENST00000312438 PLA2R1Q13018 1463 aa23.72■■□□□ 1.39
CLCF1-201ENST00000312438 EIF2AK4Q9P2K8 1649 aaKnown RBP23.72■■□□□ 1.39
CLCF1-201ENST00000312438 HECW2Q9P2P5 1572 aa23.71■■□□□ 1.39
CLCF1-201ENST00000312438 DEPDC5O75140 1603 aa23.7■■□□□ 1.38
CLCF1-201ENST00000312438 HIRIP3Q9BW71 556 aaPredicted RBP23.67■■□□□ 1.38
CLCF1-201ENST00000312438 VWDEQ8N2E2 1590 aa23.67■■□□□ 1.38
CLCF1-201ENST00000312438 EIF4G2P78344 907 aaKnown RBP eCLIP23.66■■□□□ 1.38
CLCF1-201ENST00000312438 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.38
CLCF1-201ENST00000312438 DCAF11Q8TEB1 546 aa23.63■■□□□ 1.37
CLCF1-201ENST00000312438 UHRF1BP1Q6BDS2 1440 aa23.63■■□□□ 1.37
CLCF1-201ENST00000312438 HSPA5P11021 654 aaKnown RBP23.62■■□□□ 1.37
CLCF1-201ENST00000312438 MIER1Q8N108 512 aa23.62■■□□□ 1.37
CLCF1-201ENST00000312438 PTPRTO14522 1441 aa23.61■■□□□ 1.37
CLCF1-201ENST00000312438 FRMPD1Q5SYB0 1578 aa23.61■■□□□ 1.37
CLCF1-201ENST00000312438 GGT6Q6P531 493 aa23.6■■□□□ 1.37
CLCF1-201ENST00000312438 KDM2AQ9Y2K7 1162 aa23.6■■□□□ 1.37
CLCF1-201ENST00000312438 RICTORQ6R327 1708 aa23.6■■□□□ 1.37
CLCF1-201ENST00000312438 MROH1Q8NDA8 1641 aa23.6■■□□□ 1.37
CLCF1-201ENST00000312438 ZNF326Q5BKZ1 582 aaKnown RBP23.59■■□□□ 1.37
CLCF1-201ENST00000312438 ABCA6Q8N139 1617 aa23.59■■□□□ 1.37
CLCF1-201ENST00000312438 RGL3Q3MIN7 710 aa23.59■■□□□ 1.37
CLCF1-201ENST00000312438 TET3O43151 1660 aa23.59■■□□□ 1.37
CLCF1-201ENST00000312438 LMTK2Q8IWU2 1503 aa23.57■■□□□ 1.36
CLCF1-201ENST00000312438 E9PCH4 1651 aa23.56■■□□□ 1.36
CLCF1-201ENST00000312438 DIP2CQ9Y2E4 1556 aa23.56■■□□□ 1.36
CLCF1-201ENST00000312438 RNF17Q9BXT8 1623 aaKnown RBP23.56■■□□□ 1.36
CLCF1-201ENST00000312438 YEATS2Q9ULM3 1422 aa23.56■■□□□ 1.36
CLCF1-201ENST00000312438 PPRC1Q5VV67 1664 aaKnown RBP23.55■■□□□ 1.36
CLCF1-201ENST00000312438 DDX10Q13206 875 aaKnown RBP23.55■■□□□ 1.36
CLCF1-201ENST00000312438 WASHC2CQ9Y4E1 1318 aa23.54■■□□□ 1.36
CLCF1-201ENST00000312438 ZMYM4Q5VZL5 1548 aa23.54■■□□□ 1.36
CLCF1-201ENST00000312438 TRPM2O94759 1503 aa23.53■■□□□ 1.36
CLCF1-201ENST00000312438 BCORL1Q5H9F3 1711 aa23.53■■□□□ 1.36
CLCF1-201ENST00000312438 TSPOAP1O95153 1857 aa23.51■■□□□ 1.35
CLCF1-201ENST00000312438 SPATA31E1Q6ZUB1 1445 aa23.5■■□□□ 1.35
CLCF1-201ENST00000312438 STAC3Q96MF2 364 aa23.5■■□□□ 1.35
CLCF1-201ENST00000312438 EFCAB6Q5THR3 1501 aa23.49■■□□□ 1.35
CLCF1-201ENST00000312438 RALGAPBQ86X10 1494 aa23.49■■□□□ 1.35
CLCF1-201ENST00000312438 KIF13AQ9H1H9 1805 aa23.47■■□□□ 1.35
CLCF1-201ENST00000312438 CARD11Q9BXL7 1154 aa23.47■■□□□ 1.35
CLCF1-201ENST00000312438 PRAG1Q86YV5 1406 aa23.47■■□□□ 1.35
CLCF1-201ENST00000312438 SPHKAPQ2M3C7 1700 aa23.45■■□□□ 1.34
CLCF1-201ENST00000312438 ABCC3O15438 1527 aa23.43■■□□□ 1.34
CLCF1-201ENST00000312438 USP47Q96K76 1375 aa23.43■■□□□ 1.34
CLCF1-201ENST00000312438 COL17A1Q9UMD9 1497 aaPredicted RBP23.43■■□□□ 1.34
CLCF1-201ENST00000312438 WASHC2AQ641Q2 1341 aa23.43■■□□□ 1.34
CLCF1-201ENST00000312438 NPATQ14207 1427 aa23.43■■□□□ 1.34
CLCF1-201ENST00000312438 ROCK2O75116 1388 aaKnown RBP23.41■■□□□ 1.34
CLCF1-201ENST00000312438 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
CLCF1-201ENST00000312438 CLTCL1P53675 1640 aa23.4■■□□□ 1.34
CLCF1-201ENST00000312438 NEURL4Q96JN8 1562 aa23.39■■□□□ 1.33
CLCF1-201ENST00000312438 ARHGAP31Q2M1Z3 1444 aa23.38■■□□□ 1.33
CLCF1-201ENST00000312438 CNTLNQ9NXG0 1405 aa23.38■■□□□ 1.33
CLCF1-201ENST00000312438 C11orf95C9JLR9 678 aaPredicted RBP23.38■■□□□ 1.33
CLCF1-201ENST00000312438 CEP152O94986 1710 aa23.38■■□□□ 1.33
CLCF1-201ENST00000312438 REREQ9P2R6 1566 aa23.38■■□□□ 1.33
CLCF1-201ENST00000312438 AGLP35573 1532 aa23.36■■□□□ 1.33
CLCF1-201ENST00000312438 GPRASP1Q5JY77 1395 aa23.35■■□□□ 1.33
CLCF1-201ENST00000312438 CCDC7Q96M83 1385 aa23.35■■□□□ 1.33
CLCF1-201ENST00000312438 NBPF1Q3BBV0 1214 aa23.35■■□□□ 1.33
CLCF1-201ENST00000312438 NOS1P29475 1434 aa23.33■■□□□ 1.33
CLCF1-201ENST00000312438 ARID4BQ4LE39 1312 aaPredicted RBP23.32■■□□□ 1.32
CLCF1-201ENST00000312438 KIF7Q2M1P5 1343 aa23.31■■□□□ 1.32
CLCF1-201ENST00000312438 ANP32CO43423 234 aa23.31■■□□□ 1.32
CLCF1-201ENST00000312438 UGGT1Q9NYU2 1555 aa23.31■■□□□ 1.32
CLCF1-201ENST00000312438 TRPM1Q7Z4N2 1603 aa23.31■■□□□ 1.32
CLCF1-201ENST00000312438 ST20-MTHFSA0A0A6YYL1 179 aa23.31■■□□□ 1.32
CLCF1-201ENST00000312438 ZC3H13Q5T200 1668 aaKnown RBP23.3■■□□□ 1.32
CLCF1-201ENST00000312438 CAMSAP1Q5T5Y3 1602 aa23.3■■□□□ 1.32
CLCF1-201ENST00000312438 CHGAP10645 457 aaKnown RBP23.29■■□□□ 1.32
CLCF1-201ENST00000312438 TRHP20396 242 aaPredicted RBP23.28■■□□□ 1.32
CLCF1-201ENST00000312438 SLC52A1Q9NWF4 448 aa23.28■■□□□ 1.32
CLCF1-201ENST00000312438 RPGRIP1LQ68CZ1 1315 aa23.27■■□□□ 1.32
CLCF1-201ENST00000312438 ARHGEF40Q8TER5 1519 aa23.26■■□□□ 1.31
CLCF1-201ENST00000312438 DNAJC5Q9H3Z4 198 aa23.25■■□□□ 1.31
CLCF1-201ENST00000312438 MYOM2P54296 1465 aa23.23■■□□□ 1.31
CLCF1-201ENST00000312438 LAMC1P11047 1609 aa23.23■■□□□ 1.31
CLCF1-201ENST00000312438 ADGRB3O60242 1522 aa23.22■■□□□ 1.31
CLCF1-201ENST00000312438 KIF1BO60333 1816 aa23.22■■□□□ 1.31
CLCF1-201ENST00000312438 IDI1Q13907 227 aa23.22■■□□□ 1.31
CLCF1-201ENST00000312438 MADDQ8WXG6 1647 aa23.22■■□□□ 1.31
CLCF1-201ENST00000312438 MLECQ14165 292 aa23.22■■□□□ 1.31
CLCF1-201ENST00000312438 ADGRF5Q8IZF2 1346 aa23.21■■□□□ 1.31
CLCF1-201ENST00000312438 CCER2I3L3R5 266 aa23.19■■□□□ 1.3
CLCF1-201ENST00000312438 CENPBP07199 599 aaPredicted RBP23.19■■□□□ 1.3
CLCF1-201ENST00000312438 FBXO31Q5XUX0 539 aaPredicted RBP23.18■■□□□ 1.3
CLCF1-201ENST00000312438 YTHDC1Q96MU7 727 aaKnown RBP23.18■■□□□ 1.3
CLCF1-201ENST00000312438 ESF1Q9H501 851 aaKnown RBP23.18■■□□□ 1.3
CLCF1-201ENST00000312438 SYNMO15061 1565 aa23.18■■□□□ 1.3
CLCF1-201ENST00000312438 SIGLEC1Q9BZZ2 1709 aa23.18■■□□□ 1.3
CLCF1-201ENST00000312438 PIK3C2BO00750 1634 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms