RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 FAM69CQ0P6D2 419 aa8.16□□□□□ -1.1
SEC22A-201ENST00000309934 SIN3AQ96ST3 1273 aa8.15□□□□□ -1.1
SEC22A-201ENST00000309934 CARD11Q9BXL7 1154 aa8.15□□□□□ -1.1
SEC22A-201ENST00000309934 POGZQ7Z3K3 1410 aa8.15□□□□□ -1.1
SEC22A-201ENST00000309934 DHX29Q7Z478 1369 aaKnown RBP8.15□□□□□ -1.11
SEC22A-201ENST00000309934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.14□□□□□ -1.11
SEC22A-201ENST00000309934 RPGRIP1LQ68CZ1 1315 aa8.14□□□□□ -1.11
SEC22A-201ENST00000309934 WASHC2CQ9Y4E1 1318 aa8.14□□□□□ -1.11
SEC22A-201ENST00000309934 SYCP2Q9BX26 1530 aa8.14□□□□□ -1.11
SEC22A-201ENST00000309934 CHGAP10645 457 aaKnown RBP8.13□□□□□ -1.11
SEC22A-201ENST00000309934 PLXNC1O60486 1568 aa8.13□□□□□ -1.11
SEC22A-201ENST00000309934 POLR1AO95602 1720 aaPredicted RBP8.13□□□□□ -1.11
SEC22A-201ENST00000309934 CCER2I3L3R5 266 aa8.13□□□□□ -1.11
SEC22A-201ENST00000309934 POLR3GLQ9BT43 218 aa8.13□□□□□ -1.11
SEC22A-201ENST00000309934 TMF1P82094 1093 aa8.12□□□□□ -1.11
SEC22A-201ENST00000309934 A0A0U1RQG5 324 aaPredicted RBP8.12□□□□□ -1.11
SEC22A-201ENST00000309934 ANKRD30BQ9BXX2 1392 aa8.12□□□□□ -1.11
SEC22A-201ENST00000309934 RPRD2Q5VT52 1461 aaKnown RBP8.12□□□□□ -1.11
SEC22A-201ENST00000309934 MAGI2Q86UL8 1455 aa8.12□□□□□ -1.11
SEC22A-201ENST00000309934 L3MBTL2Q969R5 705 aa8.11□□□□□ -1.11
SEC22A-201ENST00000309934 ABCC1P33527 1531 aa8.11□□□□□ -1.11
SEC22A-201ENST00000309934 ARHGEF12Q9NZN5 1544 aa8.11□□□□□ -1.11
SEC22A-201ENST00000309934 NCBP3Q53F19 620 aaKnown RBP8.11□□□□□ -1.11
SEC22A-201ENST00000309934 DCAF11Q8TEB1 546 aa8.11□□□□□ -1.11
SEC22A-201ENST00000309934 KDM5DQ9BY66 1539 aa8.11□□□□□ -1.11
SEC22A-201ENST00000309934 ABCA9Q8IUA7 1624 aa8.11□□□□□ -1.11
SEC22A-201ENST00000309934 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.11□□□□□ -1.11
SEC22A-201ENST00000309934 VGFO15240 615 aaPredicted RBP8.1□□□□□ -1.11
SEC22A-201ENST00000309934 KDM2AQ9Y2K7 1162 aa8.1□□□□□ -1.11
SEC22A-201ENST00000309934 SLC52A1Q9NWF4 448 aa8.1□□□□□ -1.11
SEC22A-201ENST00000309934 CROCC2H7BZ55 1655 aa8.1□□□□□ -1.11
SEC22A-201ENST00000309934 PTPRKQ15262 1439 aa8.1□□□□□ -1.11
SEC22A-201ENST00000309934 GGT6Q6P531 493 aa8.1□□□□□ -1.11
SEC22A-201ENST00000309934 ATP7AQ04656 1500 aa8.1□□□□□ -1.11
SEC22A-201ENST00000309934 KTN1Q86UP2 1357 aaKnown RBP8.1□□□□□ -1.11
SEC22A-201ENST00000309934 CDC42BPAQ5VT25 1732 aa8.09□□□□□ -1.11
SEC22A-201ENST00000309934 A2MP01023 1474 aa8.09□□□□□ -1.11
SEC22A-201ENST00000309934 MBD5Q9P267 1494 aa8.09□□□□□ -1.11
SEC22A-201ENST00000309934 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.09□□□□□ -1.11
SEC22A-201ENST00000309934 SAMD9LQ8IVG5 1584 aa8.09□□□□□ -1.11
SEC22A-201ENST00000309934 FAM135AQ9P2D6 1515 aa8.09□□□□□ -1.11
SEC22A-201ENST00000309934 AFAP1Q8N556 730 aa8.08□□□□□ -1.12
SEC22A-201ENST00000309934 EIF2AK4Q9P2K8 1649 aaKnown RBP8.08□□□□□ -1.12
SEC22A-201ENST00000309934 MLH3Q9UHC1 1453 aa8.08□□□□□ -1.12
SEC22A-201ENST00000309934 PDE4CQ08493 712 aa8.08□□□□□ -1.12
SEC22A-201ENST00000309934 UBE2Q2Q8WVN8 375 aa8.07□□□□□ -1.12
SEC22A-201ENST00000309934 GLI2P10070 1586 aa8.07□□□□□ -1.12
SEC22A-201ENST00000309934 TTC37Q6PGP7 1564 aa8.07□□□□□ -1.12
SEC22A-201ENST00000309934 HSPA5P11021 654 aaKnown RBP8.07□□□□□ -1.12
SEC22A-201ENST00000309934 DDX10Q13206 875 aaKnown RBP8.07□□□□□ -1.12
SEC22A-201ENST00000309934 RGL3Q3MIN7 710 aa8.07□□□□□ -1.12
SEC22A-201ENST00000309934 BCANQ96GW7 911 aa8.07□□□□□ -1.12
SEC22A-201ENST00000309934 NEFMP07197 916 aa8.05□□□□□ -1.12
SEC22A-201ENST00000309934 RALBP1Q15311 655 aa8.05□□□□□ -1.12
SEC22A-201ENST00000309934 CNTLNQ9NXG0 1405 aa8.05□□□□□ -1.12
SEC22A-201ENST00000309934 TRAPPC8Q9Y2L5 1435 aa8.05□□□□□ -1.12
SEC22A-201ENST00000309934 WASHC2AQ641Q2 1341 aa8.04□□□□□ -1.12
SEC22A-201ENST00000309934 ERCC6L2Q5T890 1561 aa8.04□□□□□ -1.12
SEC22A-201ENST00000309934 USP47Q96K76 1375 aa8.04□□□□□ -1.12
SEC22A-201ENST00000309934 PZPP20742 1482 aa8.03□□□□□ -1.12
SEC22A-201ENST00000309934 KNSTRNQ9Y448 316 aa8.03□□□□□ -1.12
SEC22A-201ENST00000309934 EID1Q9Y6B2 187 aa8.03□□□□□ -1.12
SEC22A-201ENST00000309934 UNC13BO14795 1591 aa8.03□□□□□ -1.12
SEC22A-201ENST00000309934 HECW2Q9P2P5 1572 aa8.03□□□□□ -1.12
SEC22A-201ENST00000309934 ATP10AO60312 1499 aa8.03□□□□□ -1.12
SEC22A-201ENST00000309934 UHRF1BP1Q6BDS2 1440 aa8.02□□□□□ -1.13
SEC22A-201ENST00000309934 FOXD1Q16676 465 aa8.02□□□□□ -1.13
SEC22A-201ENST00000309934 TMC1Q8TDI8 760 aa8.02□□□□□ -1.13
SEC22A-201ENST00000309934 CDC42BPBQ9Y5S2 1711 aa8.01□□□□□ -1.13
SEC22A-201ENST00000309934 RALGAPBQ86X10 1494 aa8.01□□□□□ -1.13
SEC22A-201ENST00000309934 ZFYVE16Q7Z3T8 1539 aa8.01□□□□□ -1.13
SEC22A-201ENST00000309934 IQGAP3Q86VI3 1631 aa8.01□□□□□ -1.13
SEC22A-201ENST00000309934 CFAP53Q96M91 514 aa8.01□□□□□ -1.13
SEC22A-201ENST00000309934 PNNQ9H307 717 aaKnown RBP8□□□□□ -1.13
SEC22A-201ENST00000309934 PDIA4P13667 645 aaKnown RBP8□□□□□ -1.13
SEC22A-201ENST00000309934 POGKQ9P215 609 aa8□□□□□ -1.13
SEC22A-201ENST00000309934 CCDC7Q96M83 1385 aa7.99□□□□□ -1.13
SEC22A-201ENST00000309934 AMER1Q5JTC6 1135 aaPredicted RBP7.98□□□□□ -1.13
SEC22A-201ENST00000309934 TET3O43151 1660 aa7.98□□□□□ -1.13
SEC22A-201ENST00000309934 NGEFQ8N5V2 710 aa7.98□□□□□ -1.13
SEC22A-201ENST00000309934 MRS2Q9HD23 443 aa7.98□□□□□ -1.13
SEC22A-201ENST00000309934 LMTK2Q8IWU2 1503 aa7.98□□□□□ -1.13
SEC22A-201ENST00000309934 RIMBP3CA6NJZ7 1639 aa7.98□□□□□ -1.13
SEC22A-201ENST00000309934 RIMBP3BA6NNM3 1639 aa7.98□□□□□ -1.13
SEC22A-201ENST00000309934 RIMBP3Q9UFD9 1639 aa7.98□□□□□ -1.13
SEC22A-201ENST00000309934 WDR43Q15061 677 aaKnown RBP eCLIP7.98□□□□□ -1.13
SEC22A-201ENST00000309934 MIER1Q8N108 512 aa7.98□□□□□ -1.13
SEC22A-201ENST00000309934 VSIG10Q8N0Z9 540 aa7.98□□□□□ -1.13
SEC22A-201ENST00000309934 EVC2Q86UK5 1308 aa7.97□□□□□ -1.13
SEC22A-201ENST00000309934 INO80Q9ULG1 1556 aaPredicted RBP7.97□□□□□ -1.13
SEC22A-201ENST00000309934 TRPM2O94759 1503 aa7.97□□□□□ -1.13
SEC22A-201ENST00000309934 PUS7Q96PZ0 661 aaKnown RBP7.97□□□□□ -1.13
SEC22A-201ENST00000309934 HDGFL2Q7Z4V5 671 aaPredicted RBP7.96□□□□□ -1.13
SEC22A-201ENST00000309934 ARHGAP31Q2M1Z3 1444 aa7.96□□□□□ -1.13
SEC22A-201ENST00000309934 TERF2IPQ9NYB0 399 aa7.96□□□□□ -1.14
SEC22A-201ENST00000309934 RAPGEF3O95398 923 aa7.96□□□□□ -1.14
SEC22A-201ENST00000309934 ERICH6BQ5W0A0 696 aa7.96□□□□□ -1.14
SEC22A-201ENST00000309934 NINLQ9Y2I6 1382 aa7.96□□□□□ -1.14
SEC22A-201ENST00000309934 DEKP35659 375 aaKnown RBP7.95□□□□□ -1.14
SEC22A-201ENST00000309934 HAP1P54257 671 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms