RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 CGNL1Q0VF96 1302 aa22.61■■□□□ 1.21
ATP2A3-201ENST00000309890 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
ATP2A3-201ENST00000309890 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
ATP2A3-201ENST00000309890 TERF2IPQ9NYB0 399 aa22.6■■□□□ 1.21
ATP2A3-201ENST00000309890 NCOA2Q15596 1464 aa22.59■■□□□ 1.21
ATP2A3-201ENST00000309890 RTF1Q92541 710 aaKnown RBP22.59■■□□□ 1.21
ATP2A3-201ENST00000309890 FYCO1Q9BQS8 1478 aa22.58■■□□□ 1.21
ATP2A3-201ENST00000309890 NGEFQ8N5V2 710 aa22.58■■□□□ 1.2
ATP2A3-201ENST00000309890 FGD1P98174 961 aa22.57■■□□□ 1.2
ATP2A3-201ENST00000309890 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
ATP2A3-201ENST00000309890 GOLGA6L4A6NEF3 574 aa22.57■■□□□ 1.2
ATP2A3-201ENST00000309890 APBB1O00213 710 aa22.56■■□□□ 1.2
ATP2A3-201ENST00000309890 GSE1Q14687 1217 aa22.55■■□□□ 1.2
ATP2A3-201ENST00000309890 SOX12O15370 315 aa22.54■■□□□ 1.2
ATP2A3-201ENST00000309890 ZNF644Q9H582 1327 aaPredicted RBP22.52■■□□□ 1.2
ATP2A3-201ENST00000309890 APAF1O14727 1248 aa22.52■■□□□ 1.2
ATP2A3-201ENST00000309890 SLC4A3P48751 1232 aa22.52■■□□□ 1.2
ATP2A3-201ENST00000309890 CHAF1AQ13111 956 aaPredicted RBP22.52■■□□□ 1.2
ATP2A3-201ENST00000309890 MIA2Q96PC5 1412 aa22.52■■□□□ 1.19
ATP2A3-201ENST00000309890 GOLGA6L6A8MZA4 724 aa22.51■■□□□ 1.19
ATP2A3-201ENST00000309890 BRD4O60885 1362 aaPredicted RBP22.51■■□□□ 1.19
ATP2A3-201ENST00000309890 RRP7AQ9Y3A4 280 aaKnown RBP22.51■■□□□ 1.19
ATP2A3-201ENST00000309890 NRDCO43847 1150 aa22.5■■□□□ 1.19
ATP2A3-201ENST00000309890 TRAK1Q9UPV9 953 aa22.5■■□□□ 1.19
ATP2A3-201ENST00000309890 LMOD2Q6P5Q4 547 aa22.49■■□□□ 1.19
ATP2A3-201ENST00000309890 KIAA1211Q6ZU35 1233 aa22.48■■□□□ 1.19
ATP2A3-201ENST00000309890 COG6Q9Y2V7 657 aa22.48■■□□□ 1.19
ATP2A3-201ENST00000309890 A0A0G2JS52 829 aa22.47■■□□□ 1.19
ATP2A3-201ENST00000309890 ZKSCAN2Q63HK3 967 aa22.47■■□□□ 1.19
ATP2A3-201ENST00000309890 TOP2BQ02880 1626 aa22.47■■□□□ 1.19
ATP2A3-201ENST00000309890 HMMRO75330 724 aa22.47■■□□□ 1.19
ATP2A3-201ENST00000309890 LMOD3Q0VAK6 560 aa22.47■■□□□ 1.19
ATP2A3-201ENST00000309890 PTPRGP23470 1445 aa22.46■■□□□ 1.19
ATP2A3-201ENST00000309890 ANKRD50Q9ULJ7 1429 aa22.46■■□□□ 1.19
ATP2A3-201ENST00000309890 MLECQ14165 292 aa22.46■■□□□ 1.19
ATP2A3-201ENST00000309890 SYAP1Q96A49 352 aaPredicted RBP22.45■■□□□ 1.18
ATP2A3-201ENST00000309890 BCL2L13Q9BXK5 485 aa22.45■■□□□ 1.18
ATP2A3-201ENST00000309890 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.45■■□□□ 1.18
ATP2A3-201ENST00000309890 CFTRP13569 1480 aa22.45■■□□□ 1.18
ATP2A3-201ENST00000309890 DDX11L8A8MPP1 907 aa22.45■■□□□ 1.18
ATP2A3-201ENST00000309890 HFM1A2PYH4 1435 aa22.45■■□□□ 1.18
ATP2A3-201ENST00000309890 WASHC2CQ9Y4E1 1318 aa22.44■■□□□ 1.18
ATP2A3-201ENST00000309890 TIAM1Q13009 1591 aa22.43■■□□□ 1.18
ATP2A3-201ENST00000309890 STAC3Q96MF2 364 aa22.43■■□□□ 1.18
ATP2A3-201ENST00000309890 STK31Q9BXU1 1019 aa22.43■■□□□ 1.18
ATP2A3-201ENST00000309890 EFCAB5A4FU69 1503 aa22.42■■□□□ 1.18
ATP2A3-201ENST00000309890 KIAA2012Q0VF49 1180 aa22.42■■□□□ 1.18
ATP2A3-201ENST00000309890 CHMP4AQ9BY43 222 aa22.42■■□□□ 1.18
ATP2A3-201ENST00000309890 NAP1L2Q9ULW6 460 aaPredicted RBP22.41■■□□□ 1.18
ATP2A3-201ENST00000309890 CDK11BP21127 795 aaKnown RBP22.39■■□□□ 1.18
ATP2A3-201ENST00000309890 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.39■■□□□ 1.172e-6■■■■□ 26.4
ATP2A3-201ENST00000309890 WDR97A6NE52 1622 aa22.39■■□□□ 1.17
ATP2A3-201ENST00000309890 ST18O60284 1047 aa22.37■■□□□ 1.17
ATP2A3-201ENST00000309890 EVC2Q86UK5 1308 aa22.37■■□□□ 1.17
ATP2A3-201ENST00000309890 DRC7Q8IY82 874 aa22.36■■□□□ 1.17
ATP2A3-201ENST00000309890 FOXD4L1Q9NU39 408 aa22.35■■□□□ 1.17
ATP2A3-201ENST00000309890 NUTM2DQ5VT03 806 aaPredicted RBP22.35■■□□□ 1.17
ATP2A3-201ENST00000309890 DDX19BQ9UMR2 479 aa22.35■■□□□ 1.17
ATP2A3-201ENST00000309890 VGFO15240 615 aaPredicted RBP22.34■■□□□ 1.17
ATP2A3-201ENST00000309890 NBPF8Q3BBV2 869 aa22.34■■□□□ 1.17
ATP2A3-201ENST00000309890 AAMPQ13685 434 aa22.34■■□□□ 1.17
ATP2A3-201ENST00000309890 RSPH6AQ9H0K4 717 aa22.33■■□□□ 1.17
ATP2A3-201ENST00000309890 SKOR2Q2VWA4 1001 aaPredicted RBP22.33■■□□□ 1.16
ATP2A3-201ENST00000309890 ANKRD45Q5TZF3 282 aa22.32■■□□□ 1.16
ATP2A3-201ENST00000309890 TRIM6-TRIM34B2RNG4 842 aa22.32■■□□□ 1.16
ATP2A3-201ENST00000309890 DZIP1LQ8IYY4 767 aaKnown RBP22.32■■□□□ 1.16
ATP2A3-201ENST00000309890 EHBP1L1Q8N3D4 1523 aa22.32■■□□□ 1.16
ATP2A3-201ENST00000309890 SLC4A10Q6U841 1118 aa22.31■■□□□ 1.16
ATP2A3-201ENST00000309890 RUNDC1Q96C34 613 aa22.31■■□□□ 1.16
ATP2A3-201ENST00000309890 HDAC5Q9UQL6 1122 aa22.31■■□□□ 1.16
ATP2A3-201ENST00000309890 PNISRQ8TF01 805 aaKnown RBP22.31■■□□□ 1.16
ATP2A3-201ENST00000309890 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.3■■□□□ 1.16
ATP2A3-201ENST00000309890 ADAMTS8Q9UP79 889 aa22.3■■□□□ 1.16
ATP2A3-201ENST00000309890 CDCA7LQ96GN5 454 aa22.29■■□□□ 1.16
ATP2A3-201ENST00000309890 CHMP5Q9NZZ3 219 aa22.29■■□□□ 1.16
ATP2A3-201ENST00000309890 HTATSF1O43719 755 aaKnown RBP22.29■■□□□ 1.16
ATP2A3-201ENST00000309890 NFKBIBQ15653 356 aa22.29■■□□□ 1.16
ATP2A3-201ENST00000309890 TAOK2Q9UL54 1235 aa22.29■■□□□ 1.16
ATP2A3-201ENST00000309890 DDX49Q9Y6V7 483 aaKnown RBP22.28■■□□□ 1.16
ATP2A3-201ENST00000309890 AKNAQ7Z591 1439 aa22.28■■□□□ 1.16
ATP2A3-201ENST00000309890 SMG6Q86US8 1419 aaKnown RBP22.27■■□□□ 1.16
ATP2A3-201ENST00000309890 KIAA1107Q9UPP5 1409 aa22.27■■□□□ 1.16
ATP2A3-201ENST00000309890 ELL2O00472 640 aaPredicted RBP22.27■■□□□ 1.16
ATP2A3-201ENST00000309890 CCDC184Q52MB2 194 aa22.25■■□□□ 1.15
ATP2A3-201ENST00000309890 CSPP1Q1MSJ5 1256 aa22.25■■□□□ 1.15
ATP2A3-201ENST00000309890 PHF14O94880 888 aa22.24■■□□□ 1.15
ATP2A3-201ENST00000309890 GPATCH3Q96I76 525 aa22.24■■□□□ 1.15
ATP2A3-201ENST00000309890 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.156e-7■■■■■ 28.7
ATP2A3-201ENST00000309890 NAIPQ13075 1403 aa22.24■■□□□ 1.15
ATP2A3-201ENST00000309890 PRDM2Q13029 1718 aa22.23■■□□□ 1.15
ATP2A3-201ENST00000309890 DIAPH1O60610 1272 aaKnown RBP22.22■■□□□ 1.15
ATP2A3-201ENST00000309890 PAK3O75914 559 aaPredicted RBP22.22■■□□□ 1.15
ATP2A3-201ENST00000309890 KIF16BQ96L93 1317 aa22.21■■□□□ 1.15
ATP2A3-201ENST00000309890 NOL8Q76FK4 1167 aaKnown RBP22.2■■□□□ 1.14
ATP2A3-201ENST00000309890 PANK1Q8TE04 598 aa22.2■■□□□ 1.14
ATP2A3-201ENST00000309890 PPP2R1AP30153 589 aa22.2■■□□□ 1.14
ATP2A3-201ENST00000309890 RIPK4P57078 832 aa22.2■■□□□ 1.14
ATP2A3-201ENST00000309890 API5Q9BZZ5 524 aaKnown RBP22.2■■□□□ 1.14
ATP2A3-201ENST00000309890 HMGXB3Q12766 1538 aa22.19■■□□□ 1.14
ATP2A3-201ENST00000309890 BACH2Q9BYV9 841 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms