RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 CAVIN1Q6NZI2 390 aaKnown RBP13.6□□□□□ -0.23
GGA2-201ENST00000309859 PNISRQ8TF01 805 aaKnown RBP13.59□□□□□ -0.23
GGA2-201ENST00000309859 C22orf23Q9BZE7 217 aa13.58□□□□□ -0.24
GGA2-201ENST00000309859 CHMP4BQ9H444 224 aaKnown RBP13.58□□□□□ -0.24
GGA2-201ENST00000309859 RWDD1Q9H446 243 aaPredicted RBP13.58□□□□□ -0.24
GGA2-201ENST00000309859 CCDC18Q5T9S5 1454 aa13.58□□□□□ -0.24
GGA2-201ENST00000309859 CGNQ9P2M7 1197 aaKnown RBP13.58□□□□□ -0.24
GGA2-201ENST00000309859 SPDYE4A6NLX3 237 aa13.57□□□□□ -0.24
GGA2-201ENST00000309859 TRERF1Q96PN7 1200 aa13.57□□□□□ -0.24
GGA2-201ENST00000309859 BCAR3O75815 825 aa13.57□□□□□ -0.24
GGA2-201ENST00000309859 MAP7D2Q96T17 732 aa13.56□□□□□ -0.24
GGA2-201ENST00000309859 KIF15Q9NS87 1388 aa13.56□□□□□ -0.24
GGA2-201ENST00000309859 NBPF8Q3BBV2 869 aa13.55□□□□□ -0.24
GGA2-201ENST00000309859 PKD2Q13563 968 aa13.55□□□□□ -0.24
GGA2-201ENST00000309859 ZNF592Q92610 1267 aa13.55□□□□□ -0.24
GGA2-201ENST00000309859 CHGAP10645 457 aaKnown RBP13.55□□□□□ -0.24
GGA2-201ENST00000309859 CENPJQ9HC77 1338 aaPredicted RBP13.55□□□□□ -0.24
GGA2-201ENST00000309859 MAPK8IP3Q9UPT6 1336 aa13.55□□□□□ -0.24
GGA2-201ENST00000309859 PMFBP1Q8TBY8 1022 aa13.55□□□□□ -0.24
GGA2-201ENST00000309859 TAOK2Q9UL54 1235 aa13.55□□□□□ -0.24
GGA2-201ENST00000309859 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
GGA2-201ENST00000309859 USP47Q96K76 1375 aa13.54□□□□□ -0.24
GGA2-201ENST00000309859 CCDC173Q0VFZ6 552 aa13.54□□□□□ -0.24
GGA2-201ENST00000309859 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
GGA2-201ENST00000309859 RRBP1Q9P2E9 1410 aaKnown RBP13.53□□□□□ -0.24
GGA2-201ENST00000309859 APAF1O14727 1248 aa13.53□□□□□ -0.24
GGA2-201ENST00000309859 SKOR2Q2VWA4 1001 aaPredicted RBP13.53□□□□□ -0.24
GGA2-201ENST00000309859 TBC1D2Q9BYX2 928 aa13.53□□□□□ -0.24
GGA2-201ENST00000309859 ERICH4A6NGS2 130 aa13.52□□□□□ -0.24
GGA2-201ENST00000309859 KIF27Q86VH2 1401 aa13.52□□□□□ -0.24
GGA2-201ENST00000309859 ZSCAN30Q86W11 494 aa13.52□□□□□ -0.25
GGA2-201ENST00000309859 PANK3Q9H999 370 aa13.52□□□□□ -0.25
GGA2-201ENST00000309859 FHAD1B1AJZ9 1412 aa13.52□□□□□ -0.25
GGA2-201ENST00000309859 CSPP1Q1MSJ5 1256 aa13.51□□□□□ -0.25
GGA2-201ENST00000309859 ADAMTS8Q9UP79 889 aa13.51□□□□□ -0.25
GGA2-201ENST00000309859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.5□□□□□ -0.25
GGA2-201ENST00000309859 SEC24BO95487 1268 aa13.5□□□□□ -0.25
GGA2-201ENST00000309859 PTMSP20962 102 aa13.5□□□□□ -0.25
GGA2-201ENST00000309859 PAXIP1Q6ZW49 1069 aaPredicted RBP13.5□□□□□ -0.25
GGA2-201ENST00000309859 C8orf34Q49A92 452 aa13.5□□□□□ -0.25
GGA2-201ENST00000309859 ROCK2O75116 1388 aaKnown RBP13.49□□□□□ -0.25
GGA2-201ENST00000309859 FBLN2P98095 1184 aa13.49□□□□□ -0.25
GGA2-201ENST00000309859 U2SURPO15042 1029 aaKnown RBP13.49□□□□□ -0.25
GGA2-201ENST00000309859 PDZRN3Q9UPQ7 1066 aa13.49□□□□□ -0.25
GGA2-201ENST00000309859 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
GGA2-201ENST00000309859 NPHP1O15259 732 aa13.48□□□□□ -0.25
GGA2-201ENST00000309859 MAPKBP1O60336 1514 aa13.48□□□□□ -0.25
GGA2-201ENST00000309859 PRPF40AO75400 957 aaKnown RBP13.48□□□□□ -0.25
GGA2-201ENST00000309859 AAMPQ13685 434 aa13.47□□□□□ -0.25
GGA2-201ENST00000309859 CASC1Q6TDU7 716 aa13.47□□□□□ -0.25
GGA2-201ENST00000309859 NAP1L2Q9ULW6 460 aaPredicted RBP13.47□□□□□ -0.25
GGA2-201ENST00000309859 TMF1P82094 1093 aa13.46□□□□□ -0.25
GGA2-201ENST00000309859 FGD1P98174 961 aa13.46□□□□□ -0.25
GGA2-201ENST00000309859 CHMP3Q9Y3E7 222 aa13.46□□□□□ -0.25
GGA2-201ENST00000309859 FHOD3Q2V2M9 1422 aa13.46□□□□□ -0.25
GGA2-201ENST00000309859 LNPKQ9C0E8 428 aa13.46□□□□□ -0.25
GGA2-201ENST00000309859 SMC4Q9NTJ3 1288 aa13.46□□□□□ -0.25
GGA2-201ENST00000309859 PDIA4P13667 645 aaKnown RBP13.46□□□□□ -0.25
GGA2-201ENST00000309859 MTERF4Q7Z6M4 381 aaKnown RBP13.46□□□□□ -0.25
GGA2-201ENST00000309859 PPP4R3BQ5MIZ7 849 aa13.46□□□□□ -0.26
GGA2-201ENST00000309859 ANKRD45Q5TZF3 282 aa13.44□□□□□ -0.26
GGA2-201ENST00000309859 TSC1Q92574 1164 aa13.44□□□□□ -0.26
GGA2-201ENST00000309859 CCDC39Q9UFE4 941 aa13.43□□□□□ -0.26
GGA2-201ENST00000309859 IGHDP01880 384 aa13.43□□□□□ -0.26
GGA2-201ENST00000309859 SPC24Q8NBT2 197 aa13.43□□□□□ -0.26
GGA2-201ENST00000309859 TNPO1Q92973 898 aaKnown RBP13.42□□□□□ -0.26
GGA2-201ENST00000309859 CGNL1Q0VF96 1302 aa13.42□□□□□ -0.26
GGA2-201ENST00000309859 APPP05067 770 aa13.41□□□□□ -0.26
GGA2-201ENST00000309859 TSPY4P0CV99 314 aa13.41□□□□□ -0.26
GGA2-201ENST00000309859 TSPY10P0CW01 314 aa13.41□□□□□ -0.26
GGA2-201ENST00000309859 ZNF830Q96NB3 372 aaPredicted RBP13.41□□□□□ -0.26
GGA2-201ENST00000309859 CFDP1Q9UEE9 299 aaPredicted RBP13.4□□□□□ -0.26
GGA2-201ENST00000309859 KCNJ4P48050 445 aa13.4□□□□□ -0.26
GGA2-201ENST00000309859 SYAP1Q96A49 352 aaPredicted RBP13.4□□□□□ -0.26
GGA2-201ENST00000309859 UACAQ9BZF9 1416 aa13.4□□□□□ -0.27
GGA2-201ENST00000309859 SSFA2P28290 1259 aa13.39□□□□□ -0.27
GGA2-201ENST00000309859 CARMIL1Q5VZK9 1371 aa13.39□□□□□ -0.27
GGA2-201ENST00000309859 SYCE3A1L190 88 aa13.39□□□□□ -0.27
GGA2-201ENST00000309859 PDCL2Q8N4E4 241 aa13.39□□□□□ -0.27
GGA2-201ENST00000309859 RBM27Q9P2N5 1060 aaKnown RBP13.39□□□□□ -0.27
GGA2-201ENST00000309859 GOLGA6L4A6NEF3 574 aa13.39□□□□□ -0.27
GGA2-201ENST00000309859 BAZ1AQ9NRL2 1556 aaPredicted RBP13.39□□□□□ -0.27
GGA2-201ENST00000309859 AEBP2Q6ZN18 517 aaPredicted RBP13.39□□□□□ -0.27
GGA2-201ENST00000309859 SASS6Q6UVJ0 657 aa13.38□□□□□ -0.27
GGA2-201ENST00000309859 IFT57Q9NWB7 429 aa13.38□□□□□ -0.27
GGA2-201ENST00000309859 BRD4O60885 1362 aaPredicted RBP13.37□□□□□ -0.27
GGA2-201ENST00000309859 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
GGA2-201ENST00000309859 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.271e-7■■■□□ 18.5
GGA2-201ENST00000309859 CUX2O14529 1486 aa13.36□□□□□ -0.27
GGA2-201ENST00000309859 ELL2O00472 640 aaPredicted RBP13.36□□□□□ -0.27
GGA2-201ENST00000309859 CFAP53Q96M91 514 aa13.36□□□□□ -0.27
GGA2-201ENST00000309859 ZFP91Q96JP5 570 aaPredicted RBP13.35□□□□□ -0.27
GGA2-201ENST00000309859 KIF3AQ9Y496 699 aa13.35□□□□□ -0.27
GGA2-201ENST00000309859 MORC1Q86VD1 984 aa13.35□□□□□ -0.27
GGA2-201ENST00000309859 ERBB4Q15303 1308 aa13.35□□□□□ -0.27
GGA2-201ENST00000309859 CERS3Q8IU89 383 aa13.34□□□□□ -0.27
GGA2-201ENST00000309859 OFD1O75665 1012 aa13.34□□□□□ -0.27
GGA2-201ENST00000309859 ZRSR1Q15695 479 aaKnown RBP13.34□□□□□ -0.27
GGA2-201ENST00000309859 SKIDA1Q1XH10 827 aa13.34□□□□□ -0.27
GGA2-201ENST00000309859 LRRC9Q6ZRR7 1453 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms